Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “soil salinity”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 73 records · Page 4Linked to original sources
PubMed2005

Georelational analysis of soil type, soil salt content, landform, and land use in the Yellow River Delta, China.

The Yellow River Delta, one of China's three major river deltas, is becoming a major region for the development of agriculture and fisheries. Protecting the delicate ecology of newly formed aquatic systems as well as the evolution of soils, natural vegetation, and fauna on older upland environments in the delta is a priority in planning for the wise use of the delta's resources for future agricultural development. In this article, we use a Geographic Information System (GIS) to analyze relationships between land-use/ land-cover characteristics in the Dongying municipality, one of the most intensely developed areas of the delta, and spatial variations in soil salinity and landforms. This analysis reveals that soil salt content decreases from regionally high values in isolated depressions to relatively moderate values in embanked former back swamps, with the lowest values occurring in abandoned river courses. Comparing the present land use on this soil salinity-landform pattern shows that it is basically at odds with general concepts of land suitability for agricultural utilization of saline soils. Crop-based agriculture in the region is probably overdeveloped, whereas more appropriate agricultural development, like cattle and forest production, is underrepresented. Future development should focus on converting farmland in embanked former back swamps and abandoned river courses into grasslands and forests. Crop-based agriculture (up to 151,000 ha) could be planned at the low-salinity terrace uplands and flood plains. The article provides guidelines for decision-makers regarding agricultural land use and wetland protection in the Yellow River Delta.

Agriculture↗
PubMed2003

Selection of appropriate host plants used in trap culture of arbuscular mycorrhizal fungi.

Arbuscular mycorrhizal (AM) fungi in coalmine spoil, island forest and saline soils were enriched in pot culture with maize (Zea mays L.), tobacco (Nicotiana tabacum L.), white clover (Trifolium repens Linn.) and silverweed cinquefoil (Potentilla anserina L.). Based on spores, there were more species of AM fungi in the coalmine spoil (15 species, 3 genera), than in the forest soil (11 species, 4 genera) and the saline soil (5 species, 2 genera). In the trap cultures, the total of 28 species in Acaulospora, Gigaspora, Glomus, and Sclerocystis detected in the original soils were all recovered with at least one of the four trap plants. The highest spore and species numbers were recovered in trap cultures of T. repens inoculated with coalmine spoil. Glomus constrictum and Glomus multicaule were the dominant species associated with N. tabacum grown in saline soil and forest soil. The dominant species of AM fungi on the four hosts was Acaulospora mellea, which had over 90% of the spore incidence in pot trap culture in coalmine spoil. It is suggested that there be selectivity between host plants and AM fungi. The number of species of AM fungi detected was influenced by host plants under certain conditions and white clover was generally the optimal host plant to detect diversity of AM fungi.

Fungi↗
PubMed2026

Temporal proteomic analysis reveals a three-phase adaptation strategy in Phytophthora cinnamomi during salinity stress.

Phytophthora cinnamomi, a highly invasive hemibiotrophic oomycete, threatens global agriculture, forestry, and native ecosystems. Although drought and temperature effects on P. cinnamomi-host interactions are well studied, current knowledge of abiotic stress responses in P. cinnamomi remains largely centered on infection and phytopathology, with limited molecular insight into the pathogen's direct response to salinity independent of its host. To address this gap, we combined growth assays, time-resolved proteomics, and network analysis to define how P. cinnamomi responds and adapts to salinity exposure. Growth assays showed that NaCl-modified agar enhanced mycelial expansion in a concentration-dependent manner, with 100 mM NaCl significantly increasing growth at 48, 72, and 96 h compared with controls, while 50 mM NaCl remained comparable to control conditions. Temporal proteomic analysis of 100 mM NaCl treatment at 0, 1, 6, 12, and 24 h post treatment revealed dynamic shifts in protein abundance. Early induction of ROS (Reactive Oxygen Species)-detoxifying enzymes, including glutathione S-transferases and peroxidases, was consistent with ROS-specific staining assays. Network analysis identified modules enriched for redox regulation, ATP generation, ion transport, and translational control, highlighting multi-layered adaptation to elevated NaCl levels. Notably, clusters of conserved hypothetical proteins were strongly upregulated, indicating unexplored stress tolerance components in Phytophthora species. Here, we propose that P. cinnamomi rapidly activates a three-phase strategy involving metabolism readjustments, redox defenses, and cellular structure alterations under salinity conditions. With increasing soil salinization due to climate change, our study provides first mechanistic insights into P. cinnamomi's adaptive plasticity and ecological resilience to abiotic stress. SIGNIFICANCE: This study represents the first temporal proteomic analysis of salinity stress adaptation in Phytophthora cinnamomi, revealing a sophisticated three-phase adaptation strategy. This research fundamentally advances our understanding of how this globally destructive plant pathogen, P. cinnamomi, maintains environmental resilience. Our findings reveal proteome remodelling as a mechanistic framework for understanding stress tolerance in oomycetes, a group of microorganisms responsible for some of the world's most destructive agricultural and forest diseases. Our results show proteins involved in emergency damage control through metabolic recalibration to sustained adaptation. These findings have relevance for predicting pathogen behavior under climate change scenarios, where increasing soil salinity threatens agricultural productivity while simultaneously enhancing pathogen survival and virulence. Understanding how P. cinnamomi responds to prolonged salinity exposure may inform targeted biocontrol strategies and improve predictive models of disease pressure in salt-affected agricultural regions. The temporal analysis framework we present offers a broadly applicable approach for understanding microbial stress adaptation, with implications extending beyond plant pathology to environmental microbiology and biotechnology applications where stress tolerance is paramount.

Phytophthora↗
PubMedDate not supplied

Response of effluent-irrigated Eucalyptus grandis and Pinus radiata to salinity and vapor pressure deficits.

Effects of high vapor pressure deficit (VPD) and soil salinity on growth and physiology of Pinus radiata D. Don and Eucalyptus grandis Hill ex Maiden were studied in a five-year-old plantation irrigated with salt-enhanced effluent (2.2 dS m(-1)) or freshwater (0.2 dS m(-1)) for 14 weeks during spring and summer. Salt was then rapidly leached by over-irrigation with low-salinity effluent. Soil water and salinity, tree water stress, sap flux, substrate carbon conversion efficiency, foliage and stem growth, and foliar cations and chloride were monitored throughout the study. An average of 9 and 1 Mg ha(-1) of salt with an average hydraulic load of 660 and 780 mm was applied to the salt and control plots, respectively. Maximum soil salinity in the root zone was 5.8 and 6.8 dS m(-1) in the eucalypt and pine plots, respectively. Predawn water potential was more than twice as sensitive to increasing salinity in E. grandis as in P. radiata. The salt treatment reduced rates of leaf and stem growth of the eucalypts by 60 to 70% but had no effect on leaf and stem growth of the pines. In the eucalypts, salinity decreased mean leaf area by 26% and increased specific leaf area by 12% compared with control values, indicating less biomass per unit leaf area in the salt treatment. Salinity had no effects on these two parameters in pine. The salt treatment significantly increased mean foliar concentrations of Na and Cl in both species, and of K in the pines. Foliar Na concentration was 6-10 times higher in the eucalypts than in the pines. Lowered water potential and increased Na concentration in the eucalypts in response to salinity resulted in about a 50% reduction in the efficiency of conversion of carbon into biomass; however, three weeks after leaching the salt, there was no significant difference in efficiency of conversion of carbon into biomass between the treatments. Salinity had no effect on water use by eucalypts, but caused a nonsignificant decrease (7%) in water use by pines. As evaporative demand increased, crop factor (transpiration divided by pan evaporation) declined by up to 50 and 60% in the pines and eucalypts, respectively. We conclude that stomatal response to high VPD, not soil salinity, accounts for most of the reduction in summertime water use.

Journal Article↗
PubMed2006

Arbuscular mycorrhizal fungi and plant symbiosis in a saline-sodic soil.

The seasonality of arbuscular mycorrhizal (AM) fungi-plant symbiosis in Lotus glaber Mill. and Stenotaphrum secundatum (Walt.) O.K. and the association with phosphorus (P) plant nutrition were studied in a saline-sodic soil at the four seasons during a year. Plant roots of both species were densely colonized by AM fungi (90 and 73%, respectively in L. glaber and S. secundatum) at high values of soil pH (9.2) and exchangeable sodium percentage (65%). The percentage of colonized root length differed between species and showed seasonality. The morphology of root colonization had a similar pattern in both species. The arbuscular colonization fraction increased at the beginning of the growing season and was positively associated with increased P concentration in both shoot and root tissue. The vesicular colonization fraction was high in summer when plants suffer from stress imposed by high temperatures and drought periods, and negatively associated with P in plant tissue. Spore and hyphal densities in soil were not associated with AM root colonization and did not show seasonality. Our results suggest that AM fungi can survive and colonize L. glaber and S. secundatum roots adapted to extreme saline-sodic soil condition. The symbiosis responds to seasonality and P uptake by the host altering the morphology of root colonization.

Lotus↗
PubMed2026

Comparative analysis of DDR-related genes and microRNA expression during rice germination: Implications for salinity susceptibility screening.

Soil salinity poses a significant threat to the agri-food sector and particularly to rice cultivation. High salinity during germination induces overproduction of reactive oxygen species (ROS) that cause lesions in the DNA resulting in reduced vigor. MicroRNAs (miRNAs) are known to modulate stress response in plants, however, studies focusing on its relation with the expression of the DNA damage response (DDR)-related genes are not thoroughly explored. In this regard, the aim of this work was to investigate the link between the expression of miRNAs and putative targeted DDR-related genes in response to salinity stress during germination. Eight varieties representative of indica and japonica rice subspecies were categorized into clusters through a principal component analysis (PCA) based on their germination performance and stress tolerance index under varying concentrations of NaCl. Subsequently, the expression patterns of six miRNAs and their putative targeted DDR genes were measured in two contrastive cultivars through quantitative real-time PCR (qRT-PCR) while correlations were examined through Pearson's analysis. Results showed distinct expression profiles between halotolerant and sensitive cultivars. Two miRNAs were further investigated in mature dry seeds of all the cultivars to verify their earliest, seed-specific discriminative potential. The distinct miR414 expression pattern may represent a potential biomarker for identifying salinity-susceptible cultivars during early-stage breeding screening.

Oryza↗
PubMed1986

Simulation model of a laboratory-grown phreatophytic woody legume.

A mechanistic model was developed to simulate growth of mesquite Prosopis glandulosa Torr. trees under a phreatic (groundwater) moisture regime. Experimental data obtained in a greenhouse reproducing the phreatic environment (2 m soil columns with 10 cm of water-saturated soil at the bottom) were used to parameterize three submodels predicting carbon (C), nitrogen (N) and water dynamics in leaves, branches, roots and root nodules. In the column simulation model (COLSIM), photosynthesis was driven by air temperature and soil salinity. Water availability was nonlimiting. Nitrogen was absorbed by the roots from inorganic soil N and also fixed by root nodules. Comparison of the simulation with results from the greenhouse experiment showed that the model accurately reproduced shoot biomass and nitrogen content dynamics up to three years with or without a high soil salinity content. Root biomass was underestimated when soil salinity was high because the model did not account for the increased allocation of C to roots under conditions of high salinity. Observed annual cycles of water uptake during the three-year run were not reproduced because the model did not include a phenological function which apparently drives these cycles.

Journal Article↗
PubMed2005

Pencycuron dissipation in soil: effect of application rate and soil conditions.

Dissipation of the fungicide pencycuron was examined under controlled laboratory conditions in clay loam soils from rice cultivated fields of alluvial soil (Typic udifluvent) and coastal saline soil (Typic endoaquept) at field rate, twice the field rate and 10 times the field rate with and without decomposed cow manure maintained at 60% of maximum water-holding capacity (WHC) and waterlogged soil condition. The half-life values depended on the initial concentrations of pencycuron. Pencycuron, in general, degraded fastest in coastal saline soil and in soil amended with decomposed cow manure at 60% of maximum WHC of soil.

Biodegradation, Environmental↗
PubMedDate not supplied

The role of ground water in arid/semiarid ecosystems, Northwest China.

Ground water plays an important role in water supply and the ecology of arid to semiarid areas such as Northwest China, where the landscape is fragile due to frequent drought in the past few decades. This paper discusses the role of ground water in these ecosystems, including the effect of condensation water and water table depth on the growth of plants and degree of soil salinity. The paper also discusses the controlling process for land desertification and soil salinization in Northwest China. Water table depth is a key factor controlling the water balance, ground water flow, and salt transport in the vadose zone. The suitable water table depth for vegetation growth, which can prevent land desertification and soil salinization, is within a range of 2 to 4 m; the optimal depth is approximately 3 m. As examples, changes in ecosystems owing to water resources development in Tarim and Manas basins, Xinjiang, China, are discussed.

China↗
PubMed2003

[Fractal characteristics of particle size distributions of mangroves soils in Yingluo Bay].

Based on fractal theory, the fractal characteristics of particle-size distributions of mangrove soils in Yingluo Bay (21 degrees 28'N, 109 degrees 43'E) were studied. The results show that the fractal dimensions of the soils ranged from 2.6837 to 2.8834, and decreased in the order of sand loam < light loam < medium loam < heavy loam < light clay. The fractal dimensions of the soils on exterior beach were lower than those on middle and inner beaches. There was a significant positive linear relationship between fractal dimension and soil salinity and organic matter content. The major factors that influenced the fractal dimensions of the soils were community type, soil texture, beach position, soil salinity, and soil organic matter content.

Algorithms↗
PubMed2000

Water relations and leaf expansion: importance of time scale.

The role of leaf water relations in controlling cell expansion in leaves of water-stressed maize and barley depends on time scale. Sudden changes in leaf water status, induced by sudden changes in humidity, light and soil salinity, greatly affect leaf elongation rate, but often only transiently. With sufficiently large changes in salinity, leaf elongation rates are persistently reduced. When plants are kept fully turgid throughout such sudden environmental changes, by placing their roots in a pressure chamber and raising the pressure so that the leaf xylem sap is maintained at atmospheric pressure, both the transient and persistent changes in leaf elongation rate disappear. All these responses show that water relations are responsible for the sudden changes in leaf elongation rate resulting from sudden changes in water stress and putative root signals play no part. However, at a time scale of days, pressurization fails to maintain high rates of leaf elongation of plants in either saline or drying soil, indicating that root signals are overriding water relations effects. In both saline and drying soil, pressurization does raise the growth rate during the light period, but a subsequent decrease during the dark results in no net effect on leaf growth over a 24 h period. When transpirational demand is very high, however, growth-promoting effects of pressurization during the light period outweigh any reductions in the dark, resulting in a net increase in growth of pressurized plants over 24 h. Thus leaf water status can limit leaf expansion rates during periods of high transpiration despite the control exercised by hormonal effects on a 24 h basis.

Cell Division↗
PubMed2006

Factors contributing to dwarfing in the mangrove Avicennia marina.

BACKGROUND AND AIMS: In Richards Bay, South Africa, Avicennia marina frequently exhibits a distinct productivity gradient, with tree height decreasing markedly from 6-10 m in the fringe zone to <1.5 m in the dwarf zone which is 120 m inland at a slightly higher elevation. In this investigation, soil physico-chemical conditions between fringe and dwarf A. marina were compared and the constraints imposed by any differences on mangrove ecophysiology and productivity determined. METHODS: Soil and plant samples were analysed for inorganic ions using spectrophotometry. Gas exchange measurements were taken with an infrared gas analyser and chlorophyll fluorescence with a fluorometer. Xylem psi was determined with a pressure chamber and chlorophyll content with a chlorophyll absorbance meter. RESULTS: In the dwarf site, soil salinity, total cations, electrical conductivity and soil concentrations of Na(+), K(+), Ca(2+), Mg(2+), Zn(2+), Mn(2+) and Cu(2+) were significantly higher than those in the fringe zone. Soil water potential and the concentration of soil P, however, were significantly lower in the dwarf site. In the leaves, Na(+) was the predominant ion and its concentration was 24 % higher in dwarf than fringe mangroves. Leaf concentrations of K(+), Ca(2+), Mg(2+), Mn(2+) and P, however, were significantly lower in dwarf mangroves. Photosynthetic performance, measured by gas exchange and chlorophyll fluorescence, was significantly reduced in the dwarf plants. CONCLUSIONS: The results suggest that hydro-edaphic factors contribute to high soil salinities, low water potentials, water stress and ion imbalance within tissues including P deficiency, which in interaction, contribute to dwarfing in Avicennia marina.

Avicennia↗
PubMed2003

Arbuscular mycorrhizal status of wild plants in saline-alkaline soils of the Yellow River Delta.

A survey was made of the arbuscular mycorrhizal (AM) status of five dominant wild plants Tamarix chinensis, Phragmites communis, Suaeda glauca, Aeluropus littoralis var. sinensis and Cirsium setosum in saline-alkaline soils of the Yellow River Delta that show low plant diversity. All of the species were colonized and showed typical AM structures (arbuscules, vesicles). The colonization percentage ranged from 0.2% to 9.5%, where C. setosum was the highest. The species richness of AMF at the different sites ranged from 2.00 to 2.40 per 50 ml soil, with an average of 2.16. Species diversity ranged from 1.99 to 2.22 per 50 ml soil, with an average of 2.13. Spore density ranged from 3 to 30 per 50 ml soil, with an average of 12. Glomus was the dominant genus, with a frequency and relative abundance of 88.1% and 68.4%, respectively. G. caledonium, with a frequency and relative abundance of 15.0% and 4.6%, respectively, was the dominant species. Differences were also observed in the distribution of AMF in different soil layers. Although there were still AM fungal spores in the layer 40 cm below the surface, most spores were found at a depth of 0-40 cm.

Chenopodiaceae↗
PubMed2003

Vegetation type conversion in Los Peñasquitos Lagoon, California: an examination of the role of watershed urbanization.

The objective of this study was to examine the role that watershed urbanization has played in changes to the vegetation types within Los Peñasquitos Lagoon, San Diego, California. Aerial photographs taken between 1928 and 1999 were used to examine changes in vegetation types. The aerial photographs were scanned into digital format and incorporated into a geographic information system (GIS). A combination of image classification techniques was used to differentiate the vegetation types. Land use/cover of the Carmel Valley watershed of the Los Peñasquitos Lagoon was mapped for the same dates as the aerial photographs. A temporal geographic analysis was conducted on the conversion of areal extent of lagoon vegetation types compared to areal extent of urban development in the watershed. Soil salinity and dry season (June-September) stream discharge were measured. The results show that approximately 80.3% of the vegetation in the study area has changed types between 1928 and 1999. Increases in the areal extent of urban development within the watershed show a strong positive relationship compared to the areal extent of brackish marsh and riparian vegetation, and a strong negative relationship to the areal extent of salt panne and mudflats. There was no significant relationship between urban development and salt marsh vegetation.Dry season stream discharge has increased by an order of magnitude. The increase in stream discharge supports the hypothesis that increased freshwater has lowered soil salinity, allowing for invasion by glycophytic species. Hydrology and soil salinity appear to be significant factors for maintaining the distribution of the lagoon vegetation types and the biotic communities that rely upon them.

California↗
PubMed2003

Influence of high salinities on the degradation of diesel fuel by bacterial consortia.

Microbial communities from three Argentinean saline soils were extracted and tested for their ability to degrade diesel fuel in liquid culture at salinities between 0% and 25%. In each case, the degradation process was continuously monitored by measuring oxygen consumption. Two communities (CR1 and CR2) showed nearly equal degrees of degradation across a salinity range of 0%-10% (the former degrading about 63% of the diesel fuel and the latter about 70% after 53 and 80 d, respectively). Furthermore, the degree of degradation was not significantly lower in the presence of 17.5% salt (58% and 65% degraded, respectively). A third community (El Zorro) showed a maximum turnover at 5% salt (79% diesel fuel degraded) and significant degradation (66%) at a salinity of 10%. However, the degree of degradation by this community clearly dropped at 0% and 15% salt. None of the communities were able to degrade diesel fuel in the presence of 25% salt, but the living cell counts showed that components of the microbial population survived the long-term exposure. The surviving portion is obviously sufficient to allow substantial restoration of the original community, as verified by the BIOLOG method. Isolates of the CR1 community were identified as members of the genera Cellulomonas, Bacillus, Dietzia, and Halomonas. In light of our investigations, the bioremediation of contaminated saline soils should be quite possible if the salinity of the soil water is lower than 15% or if it is reduced below this limit by the addition of water.

Agriculture↗
PubMed1992

Some ecological and physiological studies on bacteria isolated from salt-affected soils of Egypt.

Members of Bacillaceae, Rhizobiaceae, actinomycetes and others were isolated from cultivated and non-cultivated saline soils. The high population of bacteria and actinomycetes were almost coincided with the relatively high levels of organic matter whatever the degree of soil salinity. Bacillus stearothermophilus and B. subtilis were more frequently isolated than other Bacillus species. Most of Rhizobium isolates were salt tolerant being able to grow in media containing 3% and 6% NaCl. The abilities of different bacterial isolates to attack citrus pectin, soluble and insoluble forms of cellulose were also tested.

Actinomycetaceae↗
PubMed2006

[Soil properties under shrubs in arid area of oasis-desert transition belt].

In arid and semi-arid areas with sparse vegetation cover, the spatial pattern of surface soil had a definite effect on soil salinity and nutrient flow, which is of highly importance for understanding the processes of land cover change. In this paper, a total of 3 shrub types and 2 soil sampling depths (0-20 and 20-40 cm) in the arid area of oasis-desert transition belt were selected to assess the spatial heterogeneity of soil resources under shrubs. The results showed that different types of shrub had no significant effect on the particle size distribution of soil which was mainly composed of sand and silt, but significant cluster effect was observed under Tamarix ramosissima + bare land shrub. Soils under shrub canopy had significantly higher contents of organic matter, total N and available K, compared to those in open spaces, and presented obvious "fertile island" phenomenon. Shrub types had significant effects on soil salinity, and different cluster effect existed in soils under different shrubs. The heterogeneity of soil resources resulted from a large number of factors, including climate, soil environment, height and extent of shrub canopy, stemflow, existance of other ground cover plants, and so on, many of which were mutually interactive.

Desert Climate↗
PubMed2005

Endospores of halophilic bacteria of the family Bacillaceae isolated from non-saline Japanese soil may be transported by Kosa event (Asian dust storm).

BACKGROUND: Generally, extremophiles have been deemed to survive in the extreme environments to which they had adapted to grow. Recently many extremophiles have been isolated from places where they are not expected to grow. Alkaliphilic microorganisms have been isolated from acidic soil samples with pH 4.0, and thermophiles have been isolated from samples of low temperature. Numerous moderately halophilic microorganisms, defined as those that grow optimally in media containing 0.5-2.5 Molar (3-15%) NaCl, and halotolerant microorganisms that are able to grow in media without added NaCl and in the presence of high NaCl have been isolated from saline environments such as salterns, salt lakes and sea sands. It has tacitly been believed that habitats of halophiles able to grow in media containing more than 20% (3.4 M) are restricted to saline environments, and no reports have been published on the isolation of halophiles from ordinary garden soil samples. RESULTS: We demonstrated that many halophilic bacteria that are able to grow in the presence of 20% NaCl are inhabiting in non-saline environments such as ordinary garden soils, yards, fields and roadways in an area surrounding Tokyo, Japan. Analyses of partial 16S rRNA gene sequences of 176 isolates suggested that they were halophiles belonging to genera of the family Bacillaceae, Bacillus (11 isolates), Filobacillus (19 isolates), Gracilibacillus (6 isolates), Halobacillus (102 isolates), Lentibacillus (1 isolate), Paraliobacillus (5 isolates) and Virgibacillus (17 isolates). Sequences of 15 isolates showed similarities less than 92%, suggesting that they may represent novel taxa within the family Bacillaceae. CONCLUSION: The numbers of total bacteria of inland soil samples were in a range from 1.4 x 10(7)/g to 1.1 x 10(6)/g. One tenth of the total bacteria was occupied by endospore-forming bacteria. Only very few of the endospore-forming bacteria, roughly 1 out of 20,000, are halophilic bacteria. Most of the halophilic bacteria were surviving as endospores in the soil samples, in a range of less than 1 to about 500/g soil. Samples collected from seashore in a city confronting Tokyo Bay gave the total numbers of bacteria and endospores roughly 1000 time smaller than those of inland soil samples. Numbers of halophilic bacteria per gram, however, were almost the same as those of inland soil samples. A possible source of the halophilic endospore originating from Asian dust storms is discussed.

Journal Article↗