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Results for “fluctuating selection”

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PubMed2025

The ecology and evolution of microbial immune systems: a look on the wild vibrio side.

Natural populations of vibrio beyond the well-studied pandemic strains of Vibrio cholerae, provide a powerful model for investigating the eco-evolutionary dynamics of microbial immune systems. Their genetic diversity, ecological versatility, ease of culturability and the availability of time-series data enable detailed studies of phage-host interactions in natural contexts. This review synthesizes recent advances in vibriophage research, highlighting key findings and emerging tools. High-throughput assays and genomic tools have offered new perspectives on phage specificity, host range and the evolutionary pressures shaping these interactions. Theoretical frameworks, such as arms race and fluctuating selection dynamics, are informed by empirical data from vibrio-phage systems, with time-series sampling providing crucial insights into their temporal and spatial dynamics. A major finding is the role of mobile genetic elements (MGEs) in encoding bacterial defence systems, which shape phage-host coevolution. Discoveries like the phage satellite PICMI illustrate how MGEs facilitate the transfer of antiviral systems, influencing ecological and evolutionary dynamics. The paradox of generalist vibriophages, rare despite their broad host ranges, is also explored. By integrating experimental approaches with field observations, vibriophage research advances microbial ecology and informs sustainable applications in aquaculture and phage therapy, reinforcing vibrios as a versatile model system.This article is part of the discussion meeting issue 'The ecology and evolution of bacterial immune systems'.

Bacteriophages↗
PubMed2002

Orbital ordering in frustrated Jahn-Teller systems with 90 degrees exchange.

We show that superexchange interactions in frustrated Jahn-Teller systems with transition metal ions connected by the 90 degrees metal-oxygen-metal bonds (e.g., NaNiO2, LiNiO2, and ZnMn2O4) are much different from those in materials with the 180 degrees bonds. In the 90 degrees -exchange systems spins and orbitals are decoupled: the spin exchange is much weaker than the orbital one and it is ferromagnetic for all orbital states. Though the mean-field orbital ground state is strongly degenerate, quantum orbital fluctuations select particular ferro-orbital states. We explain the orbital and magnetic ordering observed in NaNiO2 and show that LiNiO2 is not a spin-orbital liquid.

Journal Article↗
PubMed2003

Molecular and quantitative trait variation within and among populations of the intertidal copepod Tigriopus californicus.

While molecular and quantitative trait variation may be theoretically correlated, empirical studies using both approaches frequently reveal discordant patterns, and these discrepancies can contribute to our understanding of evolutionary processes. Here, we assessed genetic variation in six populations of the copepod Tigriopus californicus. Molecular variation was estimated using five polymorphic microsatellite loci, and quantitative variation was measured using 22-life history and morphometric characters. Within populations, no correlation was found between the levels of molecular variation (heterozygosity) and quantitative variation (heritability). Between populations, quantitative subdivision (Q(ST)) was correlated with molecular subdivision when measured as F(ST) but not when measured as R(ST). Unlike most taxa studied to date, the overall level of molecular subdivision exceeded the level of quantitative subdivision (F(ST) = 0.80, R(ST) = 0.89, Q(ST) = 0.30). Factors that could contribute to this pattern include stabilizing or fluctuating selection on quantitative traits or accelerated rates of molecular evolution.

Animals↗
PubMed2000

Does anthocyanin affect outcrossing rates in Datura Stramonium (Solanaceae)?

In this paper, I investigate whether the presence or absence of anthocyanin is neutral with respect to reproduction in Datura stramonium. The observations concern the portion of the life cycle spanning pollination to germination. Pollinators do not appear to distinguish between floral morphs, as revealed by nonbiased distribution of fluorescent powder used as a pollen analogue. Pollen-tube growth is also equal for the two morphs. Seed germination is affected by the presence of anthocyanin, but apparently only by the genotype of the mother at the anthocyanin locus, and not by the genotype of the embryo itself. In addition, there was an interaction between maternal morph and the maternal source population, with seeds from high-elevation anthocyanin-producing mothers germinating most rapidly and seeds from low-elevation anthocyanin-producing mothers germinating most slowly in a common garden at low elevation. However, because germination of anthocyanin-producing and anthocyaninless progeny proceed equally quickly, the anthocyanin marker provides unbiased estimates of outcrossing rates. The results overall support the use of anthocyanin as a neutral marker, with the alternate phenotypes unlikely to be differentially impacted by the processes of pollination, pollen-tube growth, and germination. Fluctuating selection on conditions for dormancy release may be partially responsible for the maintenance of the anthocyanin polymorphism in Datura stramonium.

Journal Article↗
PubMed1990

Economics of human and canine rabies elimination: guidelines for programme orientation.

Analysis of the present situation in canine-rabies-infected countries shows that in most cases the levels of activities for controlling the disease in man and in dogs are far too low to prevent human deaths due to rabies and to eliminate the disease in the dog population. This article compares the two major orientations of a rabies control programme, i.e., prevention of the disease in man by intensifying and modernizing post-exposure treatment (strategy A) and canine rabies elimination by controlling the disease in the animal reservoir (strategy B). The operation of both strategies (A + B) together is also analysed. Based on the available data and assumptions for calculations of the costs, the results show that when the strategies are applied independently of each other, the annual cost of strategy B amounts to 25-56% of that of strategy A. When the two strategies are applied together, the actual annual spending related to the implementation of A + B becomes less than that of strategy A alone as from the fifth year following programme initiation. The sensitivity of the results was tested against selected fluctuations in the assumptions. An estimation of the costs of control activities per avoided death, according to the strategy applied, is also given. In countries where resources allocated to rabies control are inadequate in both the health and veterinary sectors, the comparison in costs and effectiveness of the two programme strategies for rabies elimination strongly suggests that consideration should be given to a national programme of dog rabies elimination. On the other hand, for obvious ethical reasons, if attention is paid to improvement of post-exposure treatment, then the national authorities should consider a planning horizon close to 15 years.

Animals↗
PubMed1998

Mutation rate of a microsatellite sequence in normal human fibroblasts.

Dinucleotide repeats, because of their repetitive nature, are prone to frameshift mutations, most likely via a DNA-polymerase slippage mechanism. Mutation rates in microsatellite DNA sequences are high in mismatch repair-defective cells. In normal cells, only estimates of maximal rates of mutation in microsatellites have been possible previously, because of the low sensitivity of screening assays for mutations in endogenous sequences. We have measured the spontaneous mutation rate of a dinucleotide repeat in diploid human foreskin fibroblasts. In our system, the mutation target is a (CA)17 repeat contained within a stably integrated plasmid. The repeat disrupts the reading frame of a neomycin (neo) resistance gene within the plasmid. Cells containing frameshift mutations in the CA repeat that correct the reading frame of the neo gene are selected using the neo analogue G418. This system of measuring microsatellite mutation rates is highly sensitive, because there is a specific target within which mutations can be selected. Fluctuation analysis of cells containing the target DNA yielded mutation rates of <3.1 x 10(-8) to 44.8 x 10(-8) mutations/cell/generation. This is the first report of a direct measurement of a spontaneous mutation rate of a microsatellite sequence in normal human cells.

Cells, Cultured↗
PubMed1985

The interaction of genetic drift and mutation with selection in a fluctuating environment.

The interaction of genetic drift, mutation, and selection in a random environment is investigated using an asymptotic analysis based on assumptions of weak mutation and strong selection. It is shown that genetic drift can be a potent force for removing variation from the population when the random environment tends to occasionally push alleles down to low frequencies.

Animals↗
PubMed1999

Fluctuations provide strong selection in Ostwald ripening.

A selection problem that appears in the Lifshitz-Slyozov (LS) theory of Ostwald ripening is reexamined. The problem concerns selection of a self-similar distribution function (DF) of the minority domains with respect to their sizes from a whole one-parameter family of solutions. A strong selection rule is found via an account of fluctuations. Fluctuations produce an infinite tail in the DF and drive the DF towards the "limiting solution" of LS or its analogs for other growth mechanisms.

Journal Article↗
PubMed2000

Characterizing frequency selectivity for envelope fluctuations.

Three experimental paradigms were used to specify the auditory system's frequency selectivity for amplitude modulation (AM). In the first experiment, masked-threshold patterns were obtained for signal-modulation frequencies of 4, 16, 64, and 256 Hz in the presence of a half-octave-wide modulation masker, both applied to the same noise carrier with a bandwidth ranging from 1 to 4 kHz. In the second experiment, psychophysical tuning curves (PTCs) were obtained for signal-modulation frequencies of 16 and 64 Hz imposed on a noise carrier as in the first experiment. In the third experiment, masked thresholds for signal-modulation frequencies of 8, 16, 32, and 64 Hz were obtained according to the "classical" band-widening paradigm, where the bandwidth of the modulation masker ranged from 1/8 to 4 octaves, geometrically centered on the signal frequency. The first two experiments allowed a direct derivation of the shape of the modulation filters while the latter paradigm only provided an indirect estimate of the filter bandwidth. Thresholds from the experiments were predicted on the basis of an envelope power-spectrum model (EPSM) which integrates the envelope power of the modulation masker in the passband of a modulation filter tuned to the signal-modulation frequency. The Q-value of second-order bandpass modulation filters was fitted to the masking patterns from the first experiment using a least-squares algorithm. Q-values of about 1 for frequencies up to 64 Hz suggest an even weaker selectivity for modulation than assumed in earlier studies. The same model also accounted reasonably well for the shape of the temporal modulation transfer function (TMTF) obtained for carrier bandwidths in the range from 1 to 6000 Hz. Peripheral filtering and effects of peripheral compression were also investigated using a multi-channel version of the model. Waveform compression did not influence the simulated results. Peripheral bandpass filtering only influenced thresholds for high modulation frequencies when signal information was strongly attenuated by the transfer function of the peripheral filters.

Adult↗
PubMed1996

Density-dependent selection in a fluctuating ungulate population.

Despite considerable theoretical interest no direct examples of density-dependent natural selection acting on simple polymorphic variation have been documented in a natural population. Here we show that the magnitude of selective differences in survival between phenotypes in two conspicuous polymorphisms of coat colour and horn type in Soay sheep Ovis aries living on St Kilda, Scotland are associated with marked changes in population density. Selection is strongest in years of high density but weak in years of low density. In addition to direct observations of density-dependent 'soft' selection in a natural population, the analysis revealed that the level of overcompensatory mortality (responsible for promoting population instability) was higher after accounting for genetic variation in the coat and horn morph traits. The results emphasize the importance of understanding the interaction between selection and population demography for both genetic and ecological studies of natural populations.

Animals↗
PubMed2003

Lack of response to selection for lower fluctuating asymmetry of mutant eyespots in the butterfly Bicyclus anynana.

Fluctuating asymmetry (FA) is claimed both to provide a means of evaluating developmental stability, and to reflect an individual's quality or the stress experienced during development. FA refers to the nondirectional variation between left and right sides, whereas directional asymmetry (DA) refers to a significant directional variation between the sides. We studied four eyespots on the dorsal forewing of the tropical butterfly, Bicyclus anynana. Two of the eyespots were specified by a mutant allele, Spotty, that was fixed in the stock. These eyespots showed higher FA than the two flanking, wild-type eyespots, although they are all formed by the same developmental pathway. We applied artificial selection for lower FA of the novel eyespots in an attempt to increase their developmental stability. There was significant variation present in individual FA in our study. However, this did not change as a result of the artificial selection. Most of the variation in FA can be accounted for by individual differences in developmental stability rather than by the applied selection or by environmental variation. Thus, it was not possible to produce any increased developmental stability of the novel eyespots by selecting for low FA. The estimates of realized heritability for both FA and DA of each eyespot were not significantly different from zero. The results suggest that FA provides little, if any, potential for exploring the mechanistic basis of developmental stability.

Alleles↗
PubMed2006

Original investigation correlated joint fluctuations can influence the selection of steady state gait patterns in the elderly.

This investigation utilized a Markov model to investigate the relationship of correlated lower extremity joint fluctuations and the selection of a steady state gait pattern in the young and elderly. Our model simulated the neuromuscular system by predicting the behavior of the joints for the next gait cycle based on the behavior exhibited in the preceding gait cycles. Such dependencies in the joint fluctuations have been noted previously in the literature. We speculated that compared to the young model, the characteristics of the correlated fluctuations in the elderly model would result in the selection of a different steady state gait pattern. The results of our simulation support the notion that correlated fluctuations in the joint kinematics influence the selection of a steady state gait pattern. The steady state gait pattern for the elderly model was dependent the ankle and hip. Conversely, the steady state gait pattern for the young control model was dependent on the behavior of the knee and hip. Based on our model, we suggested that the altered steady state gait patterns observed in the elderly may be due to an altered neuromuscular memory of prior joint behaviors.

Adult↗