Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “IONS”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 73 records · Page 4Linked to original sources

Immobilized metal ion affinity adsorption and immobilized metal ion affinity chromatography of biomaterials. Serum protein affinities for gel-immobilized iron and nickel ions.

Immobilized metal ion affinity adsorption (IMA adsorption) is a collective term that is proposed to include all kinds of adsorptions whereby metal atoms or ions immobilized on a polymer cause or dominate the interaction at the sorption sites. IMA chromatography is one of the most powerful methods available to date for protein fractionation although this is not as yet widely recognized. This study deals with the theoretical aspects of IMA adsorption and its practical applications as exemplified by the various results reported here. The synthesis of iminodiacetate-substituted agarose (IDA-agarose) and tris(carboxymethyl)ethylenediamine-agarose (TED-agarose) is described. Many types of metal ions can easily be immobilized on these gel derivatives to form IMA adsorbents. We have not observed any damage to the proteins during the adsorption-desorption process. After performance of an experiment, the gels can easily be regenerated and can be loaded with the same or a different metal ion for an ensuing experiment. Specific adsorption is demonstrated for serum proteins on immobilized Ni(II) and Fe(III). Ligand-specific desorption (affinity elution) is also demonstrated by including in the buffer system certain solutes which are similar to or identical with some particular amino acids found in proteins. High concentrations of certain salts that affect the structure of water, such as Na2SO4, promote coordinate covalent bonding of proteins by a mechanism that is apparently similar to that found in hydrophobic interactions. Neutral detergents and aquoorganic solvents may be used. This opens up the possibility for the fractionation of membrane components. The IMA-adsorption method could also be expanded to other areas besides protein fractionation.

Adsorption↗

Lithium and Cesium Ion-Pair Acidities of Dibenzyl Ketone. Aggregation of Lithium and Cesium Ion Pairs of the Enolate Ion and Dianion(1)(,).

Spectral study of the cesium and lithium enolates of dibenzyl ketone (DBK) showed that both salts exist as contact ion pairs in THF solutions. The spectral data for the dicesium salt of DBK indicate that it exists as triple ions in which both cations are in contact with the dianion. The dilithium salt of DBK forms triple ions of two types in THF: in one, both cations are in contact with the DBK dianion, in the other, one of the lithium cations is solvent-separated. Evidence for dimerization of the ion pairs was obtained for both lithium and cesium enolates of DBK from UV-vis spectral (blue shift of the absorbance band at higher concentrations) and acidity (the decrease of pK at higher concentrations) studies. The dimerization constant for the cesium enolate of DBK obtained from the acidity data (3.5 x 10(3) M(-)(1)) is considered to be more accurate than that from the spectral analysis (1.7 x 10(3) M(-)(1)). The lithium enolate is much less dimerized than its cesium counterpart with a dimerization constant from acidity data of 4.2 x 10(2) M(-)(1). The first and second cesium pK values of DBK are 18.07 and 33.70, respectively, compared to the first lithium pK of 11.62.

Journal Article↗

Clotrimazole-triiodide ion association as an ion exchanger for a triiodide ion-selective electrode.

A novel triiodide ion-selective electrode based on a clotrimazole-triiodide ion pair as a membrane carrier was prepared. It has a linear response to triiodide from 8 x 10(-6) to 5 x 10(-3) M with a slope of -68.9 mV per decade and a detection limit of 5 x 10(-6) M. The electrode response is independent of the pH of the solution in the pH range 2-9. It has a very short response time and can be used for at least 3 months without any considerable divergence in the potentials. The proposed sensor revealed very good selectivities for I3- over a variety of other anions. It was used as an indicator electrode in the potentiometric titration of triiodide ions and in an indirect potentiometric determination of clotrimazole in pharmaceutical preparations.

Clotrimazole↗

A theoretical description of non-steady-state diffusion of hydrophobic ions across lipid vesicle membranes including effects of ion-ion interactions in the aqueous phase.

A theoretical model of hydrophobic ion diffusion across vesicular membranes is presented, which is based upon activated rate theory. The model is applicable to the sudden addition of hydrophobic ions to a vesicle suspension, for example in a stopped-flow experiment. The time course of diffusion is calculated by numerical integration of differential rate equations for the ion concentrations and electrical potential differences across the membrane. The model utilizes the three-capacitor model of the membrane and an extended Debye-Hückel theory, taking into account non-neutrality on each side of the membrane. At low ionic strengths good agreement is found between the infinite time diffusion potential and the equilibrium Nernst potential. At large excess of inert electrolyte discrepancies are found, but under such conditions the membrane potential is negligible due to screening.

Cell Membrane↗

Density functional study of ion hydration for the alkali metal ions (Li+, Na+, K+) and the halide ions (F-, Br-, Cl-).

We performed first principles density functional calculations to study the effect of monovalent ions M+ (M = Li,Na,K) and A- (A = F,Cl,Br) in water with the aim of characterizing the local molecular properties of hydration. For this reason, several ion-water clusters, up to five or six water molecules were considered; such structures were optimized, and the Wannier analysis was then applied to determine the average molecular dipole moment of water. We found that with an increasing number of water molecules, the molecular polarization is determined by the water-water interaction rather than the water-ion interaction, as one would intuitively expect. These results are consistent with those obtained in previous density functional calculations and with other results obtained by employing classical polarizable water models. The main message of this work is that as one increases the number of molecules the average dipole moment of all water molecules and the ones in the first shell tends to the same value as the average of a similar sized cluster of pure water. This supports the use of nonpolarizable classical models of water in classical atomistic simulations.

Bromine↗

A mutation in S6 of Shaker potassium channels decreases the K+ affinity of an ion binding site revealing ion-ion interactions in the pore.

Under physiological conditions, potassium channels are extraordinarily selective for potassium over other ions. However, in the absence of potassium, certain potassium channels can conduct sodium. Sodium flux is blocked by the addition of low concentrations of potassium. Potassium affinity, and therefore the ability to block sodium current, varies among potassium channel subtypes (Korn, S.J., and S.R. Ikeda. 1995. Science. 269:410-412; Starkus, J.G., L. Kuschel, M.D. Rayner, and S.H. Heinemann. 1997. J. Gen. Physiol. 110:539-550). The Shaker potassium channel conducts sodium poorly in the presence of very low (micromolar) potassium due to its high potassium affinity (Starkus, J.G., L. Kuschel, M.D. Rayner, and S.H. Heinemann. 1997. J. Gen. Physiol. 110:539-550; Ogielska, E.M., and R. W. Aldrich. 1997. Biophys. J. 72:A233 [Abstr.]). We show that changing a single residue in S6, A463C, decreases the apparent internal potassium affinity of the Shaker channel pore from the micromolar to the millimolar range, as determined from the ability of potassium to block the sodium currents. Independent evidence that A463C decreases the apparent affinity of a binding site in the pore comes from a study of barium block of potassium currents. The A463C mutation decreases the internal barium affinity of the channel, as expected if barium blocks current by binding to a potassium site in the pore. The decrease in the apparent potassium affinity in A463C channels allows further study of possible ion interactions in the pore. Our results indicate that sodium and potassium can occupy the pore simultaneously and that multiple occupancy results in interactions between ions in the channel pore.

Amino Acid Sequence↗

Permeation of Na+ through open and Zn(2+)-occupied conductance states of cardiac sodium channels modified by batrachotoxin: exploring ion-ion interactions in a multi-ion channel.

Mammalian heart sodium channels inserted into planar bilayers exhibit a distinctive subconductance state when single batrachotoxin-modified channels are exposed to external Zn2+. The current-voltage behavior of the open state and the Zn(2+)-induced substate was characterized in the presence of symmetrical Na+ ranging from 2 to 3000 mM. The unitary conductance of the open state follows a biphasic dependence on [Na+] that can be accounted for by a 3-barrier-2-site model of Na+ permeation that includes double occupancy and Na(+)-Na+ repulsion. The unitary conductance of the Zn2+ substate follows a monophasic dependence on [Na+] that can be explained by a similar 3-barrier-2-site model with low affinity for Na+ and single occupancy due to repulsive interaction with a Zn2+ ion bound near the external entrance to the pore. The apparent association rate of Zn2+ derived from dwell-time analysis of flickering events is strongly reduced as [Na+] is raised from 50 to 500 mM. The apparent dissociation rate of Zn2+ is also enhanced as [Na+] is increased. While not excluding surface charge effects, such behavior is consistent with two types of ion-ion interactions: 1) A competitive binding interaction between Zn2+ and Na+ due to mutual competition for high affinity sites in close proximity. 2) A noncompetitive, destabilizing interaction resulting from simultaneous occupancy by Zn2+ and Na+. The repulsive influence of Zn2+ on Na+ binding in the cardiac Na+ channel is similar to that which has been proposed to occur between Ca2+ and Na+ in structurally related calcium channels. Based on recent mutagenesis data, a schematic model of functionally important residues in the external cation binding sites of calcium channels and cardiac sodium channels is proposed. In this model, the Zn(2+)-induced subconductance state results from Zn2+ binding to a site in the external vestibule that is close to the entrance of the pore but does not occlude it.

Amino Acid Sequence↗

The ATP4- receptor-operated ion channel of human lymphocytes: inhibition of ion fluxes by amiloride analogs and by extracellular sodium ions.

Extracellular ATP is known to increase the membrane permeability of a variety of cells. Addition of ATP to human leukemic lymphocytes loaded with the Ca2+ indicator, fura-2, induced a rise in cytosolic Ca2+ concentration which was attenuated or absent in NaCl media compared with KCl, choline Cl, or NMG Cl media. In contrast, anti-immunoglobulin antibody gave similar Ca2+ transients in NaCl and KCl media. A half-maximal inhibition of peak ATP-induced Ca2+ response was observed at 10-16 mM extracellular Na+. Basal 45Ca2+ influx into lymphocytes was stimulated 9.6-fold by ATP added to cells in KCl media, but the effect of ATP was greatly reduced for cells in NaCl media. Hexamethylene amiloride blocked 74% of the ATP-stimulated Ca45 uptake of cells in KCl media. Flow cytometry measurements of fluo-3-loaded cells confirmed that the ATP-induced rise in cytosolic Ca2+ was inhibited either by extracellular Na+ or by addition of hexamethylene amiloride. Extracellular ATP stimulated 86Rb efflux from lymphocytes 10-fold and this increment was inhibited by the amiloride analogs in a rank order of potency 5-(N-methyl-N-isobutyl)amiloride greater than 5-(N,N-hexamethylene)amiloride greater than 5-(N-ethyl-N-isopropyl)amiloride greater than amiloride. ATP-induced 86Rb efflux showed a sigmoid dependence on the concentration of ATP and Hill analysis gave K1/2 of 90 and 130 microM and n values of 2.5 and 2.5 for KCl and NaCl media, respectively. However, the maximal ATP-induced 86Rb efflux was 3-fold greater in KCl than in NaCl media. Raising extracellular Na+ from 10 to 100 mM increased ATP-induced Na+ influx from a mean of 2.0 to 3.7 nEq/10(7) cells/min, suggesting either saturability or self-inhibition by Na+ of its own influx. These data suggest that ATP opens a receptor-operated ion channel which allows increased Ca2+ and Na+ influx and Rb+ efflux and these fluxes are inhibited by extracellular Na+ ions as well as by the amiloride analogs.

Adenosine↗

Sugar adducts with alkaline earth metal ions. Interaction of L-arabinose with Sr(II) and Ba(II) ions and the effects of metal ion binding on the sugar anomeric configurations.

The reaction between L-arabinose and hydrated Sr(II) or Ba(II) halide salts has been studied in H2O solution and adducts of the type M(L-arabinose)X(2).4H(2)O, where M = Sr(II) or Ba(II) and X = Cl- or Br- have been isolated and characterized by means of Fourier transform infrared spectroscopy, 1H-NMR spectroscopy, molar conductivity and X-ray powder diffraction measurements. Due to the marked spectral similarities with those of the structurally known Ca(L-arabinose)X2 . 4H2O (X= Cl- or Br-) compounds, the Sr(II) and the BA(II) ions are eight-coordinated, binding to two l-arabinose molecules via O1, O5 of the first and O3, O4 of the second sugar moiety and to four H2O molecules. 1H-NMR spectroscopy indicated that the free L-arabinose has the beta-anomer configuration in aqueous solution, whereas the alpha-anomer isomer is preferred by Mg(II), Ca(II), Sr(II) and Ba(II) ions, on complexation.

Journal Article↗

Interfacial thermodynamics of protein adsorption, ion co-adsorption and ion binding in solution. II. Model interpretation of ion exchange in lysozyme chromatography.

In this paper we present a model for the ion exchange effects in protein adsorption. The model is applied to chromatography of lysozyme on strong cation exchanger 'mono S'. The experimental and general thermodynamic aspects have been discussed in Part 1, the preceding paper. The main modelling assumptions are (i) the charge regulation is confined to the small layer of contact between adsorbed protein and exchanger surface, (ii) the contact layer as a whole is electroneutral and (iii) the number of protein acid/base groups and exchanger surface acid groups which participate in the ion exchange is proportional to the area of the contact layer. The model is fitted to the experimental data by adjustment of only two or three parameters. The experimental co-adsorption numbers are very well reproduced. A few conspicuous features emerge: (i) the number of protein acid/base groups and exchanger surface acid groups in the contact layer varies with the medium conditions, such that the number is higher when the interaction between protein and exchanger surface is stronger. (ii) There is indirect evidence for structural alterations in the upper layers of the exchanger surface: the adsorbed protein is probably partly 'buried' in the surface.

Journal Article↗

On the increase of the intensity ratio of doubly charged ions to singly charged ions for liquid gold and copper ion sources.

The reason for the increase of R21 which is defined by the intensity ratio of the doubly charged ions to the singly charged ions, was studied. Based on the conventional field evaporation theory, an increase in the electric field and/or the source temperature is considered to be attributable. We took the fact that R21 turned to decrease at the higher current regime into consideration and examined whether the change of R21 due to change in the field or temperature would finally meet the criterion for the decrease of R21. It was concluded that an increase of the source temperature may be a possible reason for the increase of R21.

Journal Article↗

Excitation of ions by high-harmonic frequency components in Paul and Penning traps and ion guides. I. Selective simultaneous dipolar excitation of high charge states with clipped sinusoidal and non-harmonic waveforms in a linear quadrupole ion guide.

This article presents a method for simultaneous excitation of multiple high charge states of a molecular ion in Paul or Penning trap. Using a linear quadrupolar ion guide we validate the method by using a variety of time- domain excitation waveforms with high harmonics of the first charge state's resonant frequency. The proposed way of inducing harmonics is the deliberate distortion of the excitation waveform from its sinusoidal form. In order to facilitate interference of the harmonics, a superposition of two sinusoids different by a frequency factor of two is used. The simplest form of distortion - amplitude restriction - of such waveform produces interference of the harmonics and results in selective excitation of charge states. Multiple protonation states of melittin were used as a model in this study.

Mass Spectrometry↗

Raman-spectral depolarisation ratios of ions in concentrated aqueous solution. The next-to-negligible effect of highly asymmetric ion surroundings on the symmetry properties of polarisability changes during vibrations of symmetric ions. Ammonium sulphate and tetramethylammonium bromide.

Depolarisation ratios rho have been measured for the Raman spectra of solutions of composition (NH4)2 SO4*11H2O and (CH3)4NBr*29D2O. Even though the former's vibration spectrum shows clear evidence of lowered ion symmetries (presence of nu1 of SO4(2-) in the IR spectrum, IR versus R nu(max) shifts for nu3 and nu4 of SO4(2-) and nu4 of NH4+) nu1 of SO4(2-) has (apparent) rho of only 0.014, while nu2, nu3 and nu4 of SO4(2-) and nu4 (probably also nu2) of NH4+ have rho in the range 0.73-0.77; within the experimental error and base line uncertainty the latter are equal to 0.75, i.e. to rho(max) with the geometry of the optics used. For (CH3)4NBr symmetric N+-C stretching has rho 0.012; all-in-phase C-H stretching and four overtones in Fermi resonance with it have rho in the range 0.02-0.035, but the deviation from zero here is in part due to underlying or overlapping depolarised bands. The sufficiently well isolated antisymmetric CH stretching and degenerate CH bending bands again have rho in the range 0.74-0.76. These results show that the selection rules in respect of rho, which apply strictly only to isolated molecules, are for practical purposes still valid for molecules in strongly symmetry-distorting external environments in the liquid phase. More specifically: (A) During vibrations in which quasi-spherical intramolecular symmetry is retained, the externally caused aspherical component of the polarizability ellipsoid does not change aspherically to a sufficient extent for an appreciably intense anisotropic Raman band to appear. (B) During intramolecularly anti-symmetric vibrations of symmetric molecules, the portion of the externally caused distortion of the polarizability ellipsoid that fails to cancel over a whole vibration period is not large enough to give rise to an appreciably intense isotropic component of the Raman band. This means in practice rho for these Raman bands is still rho(max), even for concentrated aqueous solutions.

Ammonium Sulfate↗

Ion cyclotron resonance spectroscopy. Cyclotron double resonance provides a new technique for the study of ion-molecule reaction mechanisms.

Ion cyclotron resonance spectroscopy yields information on many aspects of ion-molecule chemistry. The method is ideally suited for experiments involving ion energies below several electron volts, and hence provides a valuable complement to other techniques (27). eyclotron double resonance is uniquely suitable for establishing relationships between reactant ions and their product ions in complex ion-molecule reaction sequences. The double-resonance experiments with isotopic species yield information on reaction mechanisms and the nature of intermediate species. Ion-molecule reactions which occur at low energies are quite sensitive to the nature of functional groups and the details of molecular structure (28). Reactions of ions or neutral molecules with specific reagents in the cyclotron spectrometer can thus be used to characterize unknown species. Once the systematic ion-molecule chemistry of useful reagents has been worked out, it should be possible to proceed in a manner directly analogous to classical chemical methods. Suppose, for example, that reagents A(+), B(+), C(+), and D(+) each have characteristic reactions with different functional groups. Then these reagents can all be mixed with an unknown neutral species, X, and each of the reactions, X + A(+) --> ?, X + B(+) --> ?, . . . . can be examined. In contrast to solution chemistry, all the reagents can be added simultaneously to the unknown, since each of the specific reactions can be examined by cyclotron double resonance. The reactions which occur, the species synthesized , and the products of degradation then characterize X. The same methodology can be applied to characterize an unknown ionic epecies X(+), through use of neutral reagents A, B, C, and D. For example, proton transfer reactions to neuteal species have been applied in studying ions of mass 45 produced from various sources (29). The order of the proton affinities of the neutral reagent molecules are as follows: NH(3) isobutylene propene. Ions of mass 45 can be produced by the protonation of ethylene oxide (see structure III), the protonation of acetaldehyde (see structure IV), and the fragmentation of dimethyl ether (see structure V). Those ions might be expected to have, respectively, the three structures: Proton transfer from the mass-45 ions from sources III and IV to NH(3) and to isobutylene occurs readily, but not proton transfer to propene. For the ion from source V, proton transfer to NH3 occurs, but not proton transfer to isobutylene or propene. Thus the proton transfer reactions to various neutral reagents demonstrate that the mass-45 ions from the various sources are different. This example is only a rudimentary version of an approach to the characterization of unusual ionic species; niore sophisticated applications can follow when the systematic chemistry of more reagents is available. This approach should be ideal for comparing nonclassical carbonium ions produced by different routes. Some very interesting ionic species are produced by rearrangements in the fragmentation of molecules, following electron impact. Such molecular rearrangements frequently result in the fragmentation of an ion radical to another ion radical with the elimination of a small neutral species (30). It should be possible to run these reactions in reverse to check the postulated mechanisms. An interesting result of the systematic study of proton transfer to various functional groups is the finding that the proton affinity of various amines and pyridine is extremely high (31). Species such as VI and VII: might be expected to be very stable; they are in fact so stable that they are unreactive with respect to subsequent chemistry at the charge center. Thus, if there are other functional groups on the ion, the important reactions should occur at these functional groups. It should be possible to design species for which the presence of the charge has little influence on the reactivity of a neutral functional group. In this case the charge functions simply as an inert label which makes the study of neutral-neutral reactions accessible by cyclotron resonance: Various routes for development of the basic technique also appear to be very promising. Echo phenomena following sequences of pulsed excitation have been observed in electron cyclotron resonance (32). Analogous transient phenomena should also occur in ion cvclotron resonances (33). Pulsed-cyclotron-resonance techniques of course have intriguing analogies to nuclear-magnetic-resonance spin-echo experiments (34) and may be the technique of choice for making accurate measurements of ion-molecule-reaction cross sections as a function of energy for low ion energies. Finally, many ion-molecule reactions yield products in excited electronic states (35). For example, the reaction N(2)- + CO --> N(2) + CO- (46) has been studied by beam techniques (36). A straightforward procedure is to observe optical emission from the cyclotron spectrometer by placing a window at the end of the cyclotron cell (37). The emission can be analyzed with a crude set of optical filters, or with a high-speed spectrograph. Optical emission from the cyclotron cell can of course originate from many sources. The radiation from a specific excited product ion can be selected by a radio-frequency-optical double-resonance experiment. If, in the generai reaction A+ + B --> *C+ + D, (47) ion A+ is irradiated at its cyclotron resonance frequency, the number density of optical emitters *C+ is changed. If the irradiating frequency is modulated, then the number of optical emitters will be modulated, so that the intensity of emission from *C+ will also be modulated. When the optical emission from *C+ is analyzed in a spectrograph with a photoelectric cell, the output of the photoelectric cell can be detected with a phase sensitive detector referenced to the modulation frequency. This highly specific modulation-detection scheme should discriminate against other sources of light in the cyclotron cell.

Deuterium↗

Influence of the crystal field stabilization energy of metal(II) ions on the structural distortion of matrix-isolated SO4(2-) guest ions in selenate matrices.

Infrared spectra of metal(II) selenate hydrates (MeSeO4.nH2O and Na2Me(SeO4)2.2H2O; n=6, 5, 4, 1; Me=Mg, Mn, Co, Ni, Cu, Zn, Cd) containing matrix-isolated SO42- guest ions are reported and discussed with respect to the S-O stretching modes 3 and 1. An adequate measure for the SO42- guest ion distortion is the site group splitting deltanuas (deltanuab and deltanuac in the case of a doublet and a triplet for 3, respectively; a, being the highest wavenumbered component of nu3) and deltanumax (the difference between the highest and the lowest wave numbered S-O stretching modes). It has been shown that the SO42- guest ion distortion depends on both the number of the sulfate oxygen atoms involved in coordinative bonds with the metal(II) ions and the electronic configuration of the metal(II) ions, i.e. their crystal field stabilization energy (CFSE) additionally to the site symmetry and the local potential at the lattice site of the host lattice. The SO42- guest ions matrix-isolated in MeSeO4.H2O (Me=Mn, Co, Zn) and in Na2Me(SeO4)2.2H2O (Me=Mn, Cu, Cd) exhibit three bands corresponding to the nu3 modes as deduced from the site group analysis and deltanuab approximately equal to deltanubc. When SO42- guest ions are incorporated in the triclinic Na2Me(SeO4)2.2H2O host lattices (Me=Co, Ni, Zn) the nu3 stretching region resembles a higher local symmetry of the SO42- guest ions (an approximate (A1 + E) splitting) than the crystallographic one (i.e. deltanuab>deltanubc instead of deltanuab approximately equal to deltanubc) and, hence, the ratio deltanuab/deltanubc has to be taken into account (the higher value of the ratio deltanuab/deltanubc, the weaker is the distortion of the SO42- guest ions). The SO42- guest ions incorporated in MeSeO4.nH2O (n=6, 5, 4) exhibit a higher local symmetry of the guest ions than that deduced from the site group analysis (D2d for the SO42- guest ions in MeSeO4.5H2O, MeSeO4.4H2O and in the monoclinic MeSeO4.6H2O host lattices and close to Td in the tetragonal MeSeO4.6H2O host lattices). The analysis of the infrared spectra of selenate host lattices containing SO42- guest ions reveals that the guest ions are stronger distorted when the adjacent metal(II) ions have CFSE not equal to 0. These ions are more resistant to angular deformations of the MeO6-octahedra (i.e. changes in the O-Me-O bond angles), thus facilitating the SO42- guest ion distortion as compared to those having CFSE=0 which allow stronger angular deformations of the respective metal octahedra. Infrared spectra of kieserite-type compounds MeSeO4.H2O (Me=Mn, Co, Zn) containing matrix-isolated SO42- guest ions and Me'2+ guest ions different from those of the host ions (i.e. Me'SO4.H2O in MeSeO4.H2O) are also presented and discussed (double matrix-spectroscopy).

Selenic Acid↗

Simplification of product ion spectra derived from multiply charged parent ions via ion/ion chemistry.

High-mass multiply charged ions fragment to yield a mixture of products of varying mass and charge. When the measurement of mass-to-charge ratio is used to determine products ion mass, product ion charge must first be established. To minimize charge-state ambiguity in product ion spectra derived from multiply charged parent ions, product ions have been subjected to proton-transfer reactions with oppositely charged ions to reduce product ion charge states largely to +1. This procedure greatly simplifies the interpretation of product ion spectra derived from multiply charged ions. Illustrative data are presented for the +4 and +3 parent ions derived from electrospray of melittin and the +12 to +4 parent ions of bovine ubiquitin, whereby product ions were formed in a conventional quadrupole ion trap tandem mass spectrometry experiment. Data are also shown for product ion mixtures derived from interface-induced dissociation of multiply charged ions derived from bovine ubiquitin, tuna cytochrome c, bovine cytochrome c, and equine cytochrome c. The use of ion/ion chemistry to simplify product ion spectra derived from multiply charged parent ions significantly extends the size range of macromolecules for which the quadrupole ion trap can derive structural information.

Amino Acid Sequence↗

Charge capacity limitations of radio frequency ion guides in their use for improved ion accumulation and trapping in mass spectrometry.

The use of radio frequency (rf) ion guides as "linear" two-dimensional ion traps and ion guides for ion storage and accumulation, respectively, is becoming increasingly important for realizing improved sensitivity in mass spectrometry. Analytical relationships describing the ion accumulation operation mode of rf ion guides are reported. Comparisons are made between the rf quadrupole ion guide, higher-order rf multipoles and rf stacked ring ion guides, in terms of the charge capacity limitations due to the instability of ions, rf focusing efficiency limits, and effects due to rf ion heating (i.e., collisional activation due to rf oscillations of ions). Analytical relations for the stored charge quantity are derived in the low ion energy approximation, which is shown to be reasonable for the systems considered. The ion density spatial distribution is derived, an exponential form of which proved to provide a good approximation for high-order rf multipoles and stacked ring rf ion guides. The limit on the stored charge dependence upon rf is shown to be directly related to the thermal dissociation thresholds for the ions being studied; the limitation is weaker for higher-order multipoles and stacked ring ion guides. These results suggest that rf quadrupoles provide an optimum configuration when accumulation of a moderate ion density is sufficient (below 10(9) elementary charges/m). Alternatively, accumulation of an appreciable density for more fragile species, such as noncovalent complexes, may be realized using higher-order multipoles and stacked ring ion guides.

Ions↗

N-terminal derivatization and fragmentation of neutral peptides via ion--molecule reactions with acylium ions: toward gas-phase Edman degradation?

The gas-phase ion-molecule reactions of neutral alanylglycine have been examined with various mass-selected acylium ions RCO(+) (R= CH(3), CD(3), C(6)H(5), C(6)F(5) and (CH(3))( 2)N), as well as the transacylation reagent O-benzoylbenzophenone in a Fourier transform ion cyclotron resonance mass spectrometer. Reactions of the gaseous dipeptide with acylium ions trapped in the ICR cell result in the formation of energized [M + RCO](+) adduct ions that fragment to yield N-terminal b-type and C-terminal y-type product ions, including a modified b(1) ion which is typically not observed in the fragmentation of protonated peptides. Judicious choice of the acylium ion employed allows some control over the product ion types that are observed (i.e., b versus y ions). The product ion distributions from these ion--molecule reactions are similar to those obtained by collision-activated dissociation in a triple quadrupole mass spectrometer of the authentic N-acylated alanylglycine derivatives. These data indicate that derivatization of the peptide in the gas-phase occurs at the N-terminal amine. Ab initio molecular orbital calculations, performed to estimate the thermochemistry of the steps associated with adduct formation as well as product ion formation, indicate that (i) the initially formed adduct is energized and hence likely to rapidly undergo fragmentation, and (ii) the likelihood for the formation of modified b(1) ions in preference to y(1) ions is dependent on the R substituent of the acylium ion. The reaction of the tetrapeptide valine--alanine--alanine--phenylalanine with the benzoyl cation was also found to yield a number of product ions, including a modified b(1) ion. This result suggests that the new experimental approach described here may provide a tool to address one of the major limitations associated with traditional mass spectrometric peptide sequencing approaches, that is, determination of the identity and order of the two N-terminal amino acids. Analogies are made between the reactions observed here and the derivatization and N-terminal cleavage reactions employed in the condensed-phase Edman degradation method.

Gases↗