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Front dynamics in reaction-diffusion systems with Levy flights: a fractional diffusion approach.

The use of reaction-diffusion models rests on the key assumption that the diffusive process is Gaussian. However, a growing number of studies have pointed out the presence of anomalous diffusion, and there is a need to understand reactive systems in the presence of this type of non-Gaussian diffusion. Here we study front dynamics in reaction-diffusion systems where anomalous diffusion is due to asymmetric Levy flights. Our approach consists of replacing the Laplacian diffusion operator by a fractional diffusion operator of order alpha, whose fundamental solutions are Levy alpha-stable distributions that exhibit power law decay, x(-(1+alpha)). Numerical simulations of the fractional Fisher-Kolmogorov equation and analytical arguments show that anomalous diffusion leads to the exponential acceleration of the front and a universal power law decay, x(-alpha), of the front's tail.

Journal Article↗

Affinity diffusion II. Comparison between thermodynamic data obtained by affinity diffusion and precipitation in tubes.

Association constants (Ka) of the precipitating system bovine serum albumin (BSA) goat anti-BSA were obtained at different temperatures via affinity diffusion (taking l/Kd - Ka) as well as via precipitation in tubes at optimal ratios. With affinity diffusion values of Ka of 0.6 to 1.1 x 10(5) l/M were found, whilst with precipitation in tubes Ka was from 3.3 to 11.2 X 10(7) l/M, using the same BSA and anti-BSA preparations. Via affinity diffusion binding energies delta F of approximately -6 to -7 kcal/M were found, with values of delta H close to zero, and a delta S of +23 entropy units. With precipitation in tubes these values were delta F -10.2 to -10.7 kcal/M, delta H -4.6 to -7.6 kcal/M and delta S +10 to +20 entropy units. The differences found with the two different methods must be ascribed to the fact that with affinity diffusion of precipitating antigen-antibody systems one just measures the interaction between the precipitating components with the highest dissociation constants, whilst with precipitation in tubes one measures the total energy of association of the system. With affinity diffusion and with precipitation in tubes, the same degree of positive entropy is observed. The system measured with affinity diffusion is approximately isothermic, whilst the total system, measured by precipitation in tubes, is strongly exothermic. Affinity diffusion still takes place at pH 9.5, at which pH no precipitation in the liquid phase takes place at optimal ratio; one may conclude from this that affinity diffusion mainly involves van der Waals interactions, as electrostatic bonding between BSA and anti-BSA is virtually abolished at that pH. This agrees well with the observation that the affinity diffusion reaction is isothermic.

Antibody Affinity↗

Diffuse field loss and diffuse retinal nerve-fiber loss in glaucoma.

A total of 61 eyes of 61 patients were examined by light-sense, flicker and resolution perimetry. All fields were classified as being normal or showing diffuse loss, localized defects or diffuse plus localized loss. For the assessment of diffuse field loss, cumulative defect curves were derived. Retinal nerve-fiber layer (RNFL) loss was assessed by a semiquantitative scoring technique. In light-sense and flicker perimetry, the total diffuse and total overall RNFL scores for eyes with diffuse field loss were approximately twice those obtained for eyes without diffuse field loss. These differences were highly statistically significant (P = 0.0055 and 0.0087 for light-sense perimetry, P = 0.0033 and 0.0042 for flicker perimetry). In resolution perimetry, eyes with diffuse field loss also showed higher RNFL scores; the differences, however, were not statistically significant. The results show that diffuse field loss in light-sense and flicker perimetry is accompanied by diffuse nerve-fiber loss.

Adult↗

Analysis of the diffusion weighted MR microscopy data of excised spinal cord of a rat on the basis of the model of restricted diffusion.

Anisotropic diffusion in the excised rat spinal cord saturated with 0.9% saline was investigated using MR microimaging with b-values up to 8000 s/mm2 for different diffusion times. Non-exponential transversal diffusion decay found in white matter (WM) and gray matter (GM) was fitted with 2 components (the "fast" and the "slow"). Significantly smaller non-exponential dependence was found for the longitudinal diffusion in the WM. Obtained results corresponding to restricted diffusion in the range from approximately 2 to approximately 7 microm were correlated with axon diameter distribution in the WM obtained from transmission electron micrographs. It was concluded that observed diffusion anisotropy in the spinal cord might be entirely explained by presence of the slow transversal component, arising from the restricted diffusion. The strict analytical description of the diffusion decay in nervous tissue requires taking into account continuous distribution of the space-scale of the restricting barriers. The simplified two-component analysis may be applicable for visualization of the nervous tissue in clinical practice.

Animals↗

Diffuse axonal injury in mild traumatic brain injury: a diffusion tensor imaging study.

OBJECT: Diffuse axonal injury (DAI) is a major complication of traumatic brain injury (TBI) that leads to functional and psychological deficits. Although DAI is frequently underdiagnosed by conventional imaging modalities, it can be demonstrated using diffusion tensor imaging. The aim of this study was to assess the presence and extent of DAI in patients with mild TBI. METHODS: Forty-six patients with mild TBI and 29 healthy volunteers underwent a magnetic resonance (MR) imaging protocol including: dual-spin echo, fluid-attenuated inversion recovery, T2-weighted gradient echo, and diffusion tensor imaging sequences. In 20 of the patients, MR imaging was performed at a mean of 4.05 days after injury. In the remaining 26, MR imaging was performed at a mean of 5.7 years after injury. In each case, mean diffusivity and fractional anisotropy were measured using both whole-brain histograms and regions of interest analysis. No differences in any of the histogram-derived measures were found between patients and control volunteers. Compared with controls, a significant reduction of fractional anisotropy was observed in patients' corpus callosum, internal capsule, and centrum semiovale, and there were significant increases of mean diffusivity in the corpus callosum and internal capsule. Neither histogram-derived nor regional diffusion tensor imaging metrics differed between the two groups. CONCLUSIONS: Although mean diffusivity and fractional anisotropy abnormalities in these patients with TBI were too subtle to be detected with the whole-brain histogram analysis, they are present in brain areas that are frequent sites of DAI. Because diffusion tensor imaging changes are present at both early and late time points following injury, they may represent an early indicator and a prognostic measure of subsequent brain damage.

Adolescent↗

Probing microscopic diffusion by 2-photon flash photolysis: measurement of isotropic and anisotropic diffusion in lens fiber cells.

Two-photon excited flash photolysis (TPEFP) was used to photorelease caged fluorescein in test solutions and inside fiber cells of the eye lens. Accurate alignment between the focus of the IR beam and the probe beam from the confocal microscope was achieved with an accessory focussing lens and computer models of diffusion were fit to experimental data to extract apparent diffusion coefficients. Inside a fiber cell, the diffusion coefficient for fluorescein was 4 x 10(-7) cm(2)/s at 21 degrees C, a value an order of magnitude lower than observed in free solution. Fluorescence also diffused between fiber cells via gap junctions. In the periphery, diffusion between cells occurred mainly in a radial direction while deep in the lens the diffusion between cells appeared more isotropic. Diffusion between cells was slower than inside cells and corresponded to less than approximately 1% of the area between cells being available for diffusion. This value is in good agreement with that expected from measurements of gap junction structure and packing density if a 1-1.5-nm aqueous gap junction pore is nearly always open.

Animals↗

Detection of apparent restricted diffusion in healthy rat brain at short diffusion times.

The application of bipolar diffusion sensitizing gradient pulses to significantly reduce the diffusion time is described. This approach is combined with the rapid U-FLARE imaging sequence. Three diffusion-sensitized types of experiments are compared and their suitability for detecting restricted diffusion is discussed. Experiments using a modification of the diffusion weighting by varying the diffusion time between 1.6 and 6.0 ms obtained nonmonoexponential signal attenuation curves from both healthy brains and postmortem. This behavior is indicative of restricted diffusion, but as it is detectable only at short diffusion times, in contrast to a restriction due to impermeable barriers, we have termed this "apparent restriction."

Animals↗

Apparent diffusion coefficients from high angular resolution diffusion imaging: estimation and applications.

High angular resolution diffusion imaging has recently been of great interest in characterizing non-Gaussian diffusion processes. One important goal is to obtain more accurate fits of the apparent diffusion processes in these non-Gaussian regions, thus overcoming the limitations of classical diffusion tensor imaging. This paper presents an extensive study of high-order models for apparent diffusion coefficient estimation and illustrates some of their applications. Using a meaningful modified spherical harmonics basis to capture the physical constraints of the problem, a new regularization algorithm is proposed. The new smoothing term is based on the Laplace-Beltrami operator and its closed form implementation is used in the fitting procedure. Next, the linear transformation between the coefficients of a spherical harmonic series of order l and independent elements of a rank-l high-order diffusion tensor is explicitly derived. This relation allows comparison of the state-of-the-art anisotropy measures computed from spherical harmonics and tensor coefficients. Published results are reproduced accurately and it is also possible to recover voxels with isotropic, single fiber anisotropic, and multiple fiber anisotropic diffusion. Validation is performed on apparent diffusion coefficients from synthetic data, from a biological phantom, and from a human brain dataset.

Algorithms↗

The effect of rotational angle and experimental parameters on the diffraction patterns and micro-structural information obtained from q-space diffusion NMR: implication for diffusion in white matter fibers.

Diffusion NMR may provide, under certain experimental conditions, micro-structural information about confined compartments totally non-invasively. The influence of the rotational angle, the pulse gradient length and the diffusion time on the diffusion diffraction patterns and q-space displacement distribution profiles was evaluated for ensembles of long cylinders having a diameter of 9 and 20 microm. It was found that the diffraction patterns are sensitive to the rotational angle (alpha) and are observed only when diffusion is measured nearly perpendicular to the long axis of the cylinders i.e., when alpha= 90 degrees +/- 5 degrees under our experimental conditions. More importantly, we also found that the structural information extracted from the displacement distribution profiles and from the diffraction patterns are very similar and in good agreement with the experimental values for cylinders of 20 microm or even 9 microm, when data is acquired with parameters that satisfy the short gradient pulse (SGP) approximation (i.e., delta -->0) and the long diffusion time limit. Since these experimental conditions are hardly met in in vitro diffusion MRI of excised organs, and cannot be met in clinical MRI scanners, we evaluated the effect of the pulse gradient duration and the diffusion time on the structural information extracted from q-space diffusion MR experiments. Indeed it was found that, as expected, accurate structural information, and diffraction patterns are observed when Delta is large enough so that the spins reach the cylinders' boundaries. In addition, it was found that large delta results in extraction of a compartment size, which is smaller than the real one. The relevance of these results to q-space MRI of neuronal tissues and fiber tracking is discussed.

Diffusion Magnetic Resonance Imaging↗

Lateral diffusion in an archipelago. Distance dependence of the diffusion coefficient.

An understanding of the distance dependence of the lateral diffusion coefficient is useful in comparing the results of diffusion measurements made over different length scales, and in analyzing the kinetics of mobile redox carriers in organelles. A distance-dependent, concentration-dependent diffusion coefficient is defined, and it is evaluated by Monte Carlo calculations of a random walk by mobile point tracers in the presence of immobile obstacles on a triangular lattice, representing the diffusion of a lipid or a small protein in the presence of immobile membrane proteins. This work confirms and extends the milling crowd model of Eisinger, J., J. Flores, and W. P. Petersen (1986. Biophys J. 49:987-1001). Similar calculations for diffusion of mobile particles interacting by a hard-core repulsion yield the distance dependence of the self-diffusion coefficient. An expression for the range of short-range diffusion is obtained, and the distance scales for various diffusion measurements are summarized.

Diffusion↗

Diffusion-weighted imaging demonstrates transient cytotoxic edema involving the corpus callosum in a patient with diffuse brain injury.

Reversible T2 hyperintense signal abnormality in the corpus callosum, although frequently seen after diffuse brain injury, has not been well clarified. With some accumulated evidence, we report a case of diffuse brain injury in a 24-year-old man. Magnetic resonance imaging (MRI) demonstrated T2 hyperintense signals in the trunk and the splenium of the corpus callosum 12 days postinjury. Echo-planar diffusion-weighted imaging was also performed on the same day, which revealed decreased diffusion (hyperintense signals) in the same site and almost the same size as T2 hyperintense signals. T1-weighted images were normal. Neuropsychological examination of the patient did not show callosal syndrome, namely hemialexia, unilateral agraphia and unilateral apraxia. Repeat MRI on day 20 demonstrated a signal decrease of both T2-weighted images and diffusion-weighted images (DWI) in the lesion. Follow-up MRI at 6 months showed complete resolution of the T2 signal abnormalities and of the corresponding decreased diffusion. Considering that diffusion-weighted imaging showed transient decreased diffusion, the lesion in the corpus callosum indicated the existence of cytotoxic edema. Also, transient DWI hyperintensity, namely cytotoxic edema, in the trunk and the splenium of the corpus callosum does not necessarily reveal callosal deficits.

Adult↗

Reduced anisotropy of water diffusion in structural cerebral abnormalities demonstrated with diffusion tensor imaging.

We used diffusion tensor imaging (DTI) to investigate the behavior of water diffusion in cerebral structural abnormalities. The fractional anisotropy, a measure of directionality of the molecular motion of water, and the mean diffusivity, a measure of the magnitude of the molecular motion of water, were measured in 18 patients with longstanding partial epilepsy and structural abnormalities on standard magnetic resonance imaging and the results compared with measurements in the white matter of 10 control subjects. Structural abnormalities were brain damage (postsurgical brain damage, nonspecific brain damage, perinatal brain damage, perinatal infarct, ischemic infarct, perinatal hypoxia, traumatic brain damage (n = 3), mitochondrial cytopathy and mesiotemporal sclerosis), dysgenesis (cortical dysplasia (n = 2) and heterotopia) and tumors (meningioma (n = 2), hypothalamic hamartoma and glioma). Anisotropy was reduced in all structural abnormalities. In the majority of abnormalities this was associated with an increased mean diffusivity; however, 30% of all structural abnormalities (some patients with brain damage and dysgenesis) had a normal mean diffusivity in combination with a reduced anisotropy. There was no correlation between fractional anisotropy and mean diffusivity measurements in structural abnormalities (r = -0.1). Our findings suggest that DTI is sensitive for the detection of a variety of structural abnormalities, that a reduced anisotropy is the common denominator in structural cerebral abnormalities of different etiologies and that mean diffusivity and fractional anisotropy may be, in part, independent. Combined measurements of mean diffusivity and fractional anisotropy are likely to increase the specificity of DTI.

Adolescent↗

Theoretical comparison of the self diffusion and mutual diffusion of interacting membrane proteins.

Self diffusion and mutual diffusion in two-dimensional membrane systems are analyzed. It is shown that interprotein interactions can produce markedly different density-dependent changes in the diffusion coefficients describing these two processes; the qualitative differences are illustrated by using a theoretical formalism valid for dilute solutions. Results are obtained for three analytical potentials: hard-core repulsions, soft repulsions, and soft repulsions with weak attractions. Self diffusion is inhibited by all three interactions. In contrast, mutual diffusion is inhibited by attractions but is enhanced by repulsions. It is shown that such interaction-dependent differences in self diffusion and mutual diffusion could underlie, among other things, the disparity in protein diffusion coefficients extracted from fluorescence recovery after photobleaching and postelectrophoresis relaxation data.

Algorithms↗

The use of reverse diffusion to validate the performance of diffusive samplers.

A number of different protocols have been put forth for measuring reverse diffusion from diffusive samplers. The basic concept is that reverse diffusion tests, depending as they do on basic laws of mass transfer, are not independent of one another, but may give general information about the limits to the possible change that can occur if the conditions to measure reverse diffusion are changed. Laboratory measurements of the reverse diffusion of vinyl chloride, using 3M and SKC diffusive samplers, following both the National Institute for Occupational Safety and Health (NIOSH) and the European Union test protocols, support the mathematical analysis developed in this article. An important conclusion is that if in following the NIOSH protocol a diffusive sampler loses 10% of its analyte over a period of 4 hours, then the maximum loss expected from a sampler allowed to back-diffuse for 8 hours is 19%.

Air Pollutants, Occupational↗

Diffusion correlation NMR spectroscopic study of anisotropic diffusion of water in plant tissues.

The anisotropic diffusion of water in chive (Allium schoenoprasum) tissues has been investigated using two-dimensional nuclear magnetic resonance methods: diffusion-diffusion correlation spectroscopy and diffusion-relaxation correlation spectroscopy. Corresponding one-dimensional T2 and diffusion measurements confirm independently the results of the two-dimensional investigations. In particular the diffusion-diffusion correlation spectroscopy method proves to be very powerful in resolving the different components of the diffusion tensor at different sites in the sample.

Algorithms↗

Analysis of diffusion changes in posttraumatic bone marrow using navigator-corrected diffusion gradients.

OBJECTIVE: This study was undertaken to analyze diffusion characteristics of normal and posttraumatic bone marrow. MATERIALS AND METHODS: Fifty consecutive patients with knee pain underwent both conventional and diffusion-weighted MR imaging (b values, 0-980 sec/mm2). Diffusion maps derived from source data were analyzed on a workstation using region-of-interest techniques. Apparent diffusion values recorded in normal marrow were compared with values recorded in abnormal posttraumatic bone marrow (square centimeters per second). RESULTS: Normal bone marrow identified in 35 patients showed minimal diffusion, with a mean value of 0.15x10(-5) cm2/sec. Bone marrow in 15 patients sustaining direct traumatic injury (21 bone bruises) showed markedly increased diffusion, with a mean value of 0.8x10(-5) cm2/sec (range, 0.4-1.3 cm2/sec). CONCLUSION: Marrow injury after trauma with trabecular damage allows increased movement or diffusion of interstitial water relative to normal marrow. The magnitude of diffusion change appears to reflect the severity of marrow injury.

Adult↗

Neonatal citrullinemia: comparison of conventional MR, diffusion-weighted, and diffusion tensor findings.

Conventional MR, diffusion-weighted, and diffusion tensor imaging were performed in an 8-day-old girl with citrullinemia. She had severe hyperammonemia for several days. On conventional T2-weighted MR images, symmetric, confluent high signal intensity was found in the bilateral thalami, basal ganglia, cortex, and subcortical white matter. Diffusion-weighted imaging demonstrated decreased apparent diffusion coefficient in these areas, reflecting cytotoxic edema. Follow-up MR imaging at the age of 4 months revealed subcortical cysts, ulegyric changes, and atrophy, which were most prominent in the occipital lobes. Diffusion tensor imaging revealed decreased anisotropy throughout the brain, consistent with diffuse injury to the oligodendro-axonal unit. Diffusion-weighted and diffusion tensor imaging are valuable techniques for the detection of irreversible brain damage and for the characterization of hyperintense lesions on T2-weighted MR images in patients with the neonatal form of citrullinemia.

Abnormalities, Multiple↗

Diffusion-weighted 19F-MRI of lung periphery: Influence of pressure and air-SF6 composition on apparent diffusion coefficients.

Lung functional magnetic resonance imaging (MRI) has become a reality using different inert hyperpolarized gases, such as 3He and 129Xe, which have provided an extraordinary boost in lung imaging and has also attracted interest to other chemically inert gaseous contrast agents. In this context, we have recently demonstrated the first diffusion-weighted images using thermally polarized inhaled sulfur hexafluoride (SF6) in small animals. The aim of this study was to evaluate whether or not the diffusion coefficient of this fluorinated gas is sensitive to pulmonary structure, gas concentration and air pressure in the airways. Diffusion coefficients of SF6 (both pure and in air mixtures) measured in vitro at different pressures and 20 degrees C showed an excellent agreement with theoretical values. Measurements of diffusion coefficients were also performed in vivo and post-mortem on healthy rats, achieving satisfactory signal-to-noise ratios (SNRs), and SF6 gas was found to be in an almost completely restricted diffusion regime in the lung, i.e., the transport by molecular diffusion is delayed by collisions with barriers such as the alveolar septa. This observed low diffusivity means that this gas will be less sensitive to structural changes in the lungs than other magnetic resonance sensitive gas such as 3He, particularly at human scale. However, it is still possible that SF6 plays a role since it opens a new structural window. Thus, the interest of researchers in delimiting the important limiting technical factors that makes this process very challenging is obvious. Among them, T2 relaxation is very fast, so gradient systems with very fast switching rate and probably large radiofrequency (RF) power and high field systems will be needed for hexafluoride to be used in human studies.

Animals↗