A DIAGRAMMATIC SUMMARY OF VARIOUS BACTERIAL CLASSIFICATIONS.
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Genetic diversity and relationships of indigenous Kenyan camel (Camelus dromedarius) populations: implications for their classification.
The genetic diversity and relationships amongst the dromedary (Camelus dromedarius) populations are poorly documented. Four recognized Kenyan dromedary breeds (Somali, Turkana, Rendille, Gabbra) and dromedary from Pakistan and the Arabian Peninsula (Saudi Arabia, United Arab Emirates) were studied using 14 microsatellite loci. Phylogenetic analysis showed that Kenyan dromedaries are distinct from Arabian and Pakistani populations. Expected heterozygosity and allelic diversity values indicate that Kenyan dromedaries are less diverse than non-Kenyan populations. With the exception of the Somali population, the Kenyan dromedaries are poorly differentiated (average FST=0.009), with only one to two loci separating the Gabbra, Rendille and Turkana populations studied (P < 0.05). Individual assignments were performed using the maximum likelihood method. A correct breed assignment of only 39-48% was observed for the Kenyan dromedaries, using an allocation stringency of a log of the odds ratio >2. Our results do not support the present classification of the indigenous Kenyan dromedary into four distinct breeds based on socio-geographical criteria. Instead, our results point to just two separate genetic entities, the Somali and a group including the Gabbra, Rendille and Turkana populations.
Animals↗
Fertility of yearling beef bulls during mating.
Crossbred (Bos taurus) yearling beef bulls were assessed for breeding soundness and physical traits prior to multi-sire natural mating at pasture. Bulls (n = 60) were assigned to six groups of nine or 10 bulls and two bull-groups were rotated on 14-day intervals during a 63-day mating season in each breeding herd (n = 3) of 191-196 cows. The remaining bulls (n = 14) were maintained under similar environmental conditions without mating exposure. Bulls were observed during mating and assessed for breeding soundness and changes following mating. Bulls used for breeding (UFB) lost 77 kg of body weight and declined from body condition scores of 6 to 4.5, whereas bulls not used for breeding (NUB) maintained body condition scores of 6 and gained 27 kg. The UFB bulls incurred a 75% total injury rate with 63% incidence of lameness and 12% incidence of reproductive injuries, resulting in a 22% attrition rate. Only 45% were physically sound at the end of mating. Scrotal circumference declined in UFB bulls (-4.58%) and increased in NUB bulls (2.49%). From the 98% BSE-satisfactory rate (UFB) prior to breeding, only 61% were BSE-satisfactory post-breeding. The NUB bulls declined from 57 to 36% satisfactory. The BSE classification was influenced by significant increases in abnormal spermatozoa (primary and secondary), which was significantly associated with injuries incurred during mating. Group and breed differences in injury rates and BSE-status following mating were evident. Environmental conditions and mating activity influenced bull seminal quality and physical condition. Pregnancy rates in all three breeding herds (91-96%) were similar, with insignificant differences between bull-groups; the effects of physical and reproductive changes on individual bull fertility were immeasurable.
Aging↗
Characteristics and fertility of stallion semen.
A study of stallion fertility was conducted on commercial studs in eastern Australia over 4 breeding seasons (1974/75-1977/78). Data from 47 stallions (66 stallion seasons) aged 2-26 years and representing 7 breeds and 1664 mares were used to relate seminal characteristics to fertility. Percentage pregnancies per service was the most sensitive measure of fertility with stallions on commercial studs. Breed and age of stallion, breeding season and the referral status of the stallion ('suspect' or 'normal') had significant (P less than 0.01) effects on fertility. The semen characteristics that were clearly associated with percentage pregnancies per service were: total volume, gel-free volume, sperm concentration, total numbers of spermatozoa and total number of live spermatozoa. Approximate threshold levels for these characteristics are presented which could provide a diagnostic basis for the classification of stallions as being suitable or doubtful for breeding purposes.
Animals↗
A model for colour vision defect.
The Unique Green phenomenon whereby the wavelengths of light which are judged neither blue-green nor yellow-green show a distinct genetic polymorph. Amongst the males there is a clear bimodality whereas there is a near normal distribution amongst the females. The classification of the types of person so produced breeds true apparently in the X-chromosome. This phenomenon now having been confirmed is impossible to fit into the strict Walraven model of colour vision without modification. The modification that would be used is discussed and it is shown that a number of other difficulties within the Walraven model model can also be resolved.
Color Perception↗
[Distribution and importance of sites of Glossina fuscipes fuscipes Newstead 1910 in the agglomeration of Bangui (Central Africal Republic)].
The authors review urban sites of Glossina fuscipes fuscipes in the suburbs of Bangui and propose a classification of these sites. Among them, two isolated breeding sites are characterized by a high density of tsetse and a close man/fly contact. To prevent a possible reactivation of the historical sleeping sickness focus of Bangui-Bimbo, a tsetse control programme in these two sites is necessary.
Animals↗
Evaluation of infertility in the bitch.
The majority of bitches that are brought to a veterinarian for reproductive evaluation are actually healthy. Infertility in the bitch is most commonly due to inappropriate breeding management rather than an inability to conceive. Before embarking on an exhaustive medical evaluation, it is important to obtain a thorough history and physical examination to identify any problems. Completion of a routine database assists in detecting significant systemic illness that may impact infertility. After consideration of history, physical examination, and minimum database, fertility problems are most commonly considered in one of four categories: abnormal estrous cycles, normal estrous cycles, failure to breed, or failure to carry a litter to term. This classification system aids in construction of a differential list and systematic evaluation of all differentials. The majority of diagnostic tests required are available to the general practitioner. Before any treatment for infertility, adequate health management must be ensured. Specific treatment for the most common causes of infertility is centered on appropriate breeding management.
Animal Husbandry↗
[Specific promoters used in plant gene engineering].
The choice of specific promoters used within a transgene construct is a vital strategy to achieve the transgene regulation in the temporal, spatial and measurable manner. The strategy has been widely used in diverse aspects of plant gene engineering, such as quality improvement, resistance breeding and bioreactor. In this paper, we describe the structure feature, classification and research method of the specific promoter and its application progresses in plant gene engineering.
Animals↗
[Factors of domestic behavior variation in farm animals species].
Fear response and domestic behavior of sheep, cattle, horses, and pigs were studied using four different variants of experimental stress conditions. As standard aversive stimulus, the factor of human presence during the feeding time was used under the following conditions: animals were starved for 12-14 or 2 h before the exposure and fed individually or in a group. In the animal species studied, these conditions were found to reveal phenotypic and genotypic differences in fear response to humans, which is correlated with feeding behavior by regulatory mechanisms. A comparative qualitative and quantitative study of the discrete variation of the associated passive-defensive responses and feeding behavior (as related to domestic behavior) was conducted with regard to the effect of the breed and individual genotypes and the feeding and zoosocial deprivation. A classification scheme of the individual diversity of this behavior in farm animal species is proposed, in which ontogenetic and evolutionary relationships earlier found in sheep were taken into consideration. It is suggested that the progressive ecological and zootechnical specialization alters adaptive reaction norms of stress response in breeds and leads to the formation of the homologous variation in a set of coadapted traits, i.e., constitutional types of animals genetically marked by their behavior. A conclusion is made that heritable polymorphism of domestic behavior represents a new source of adaptive variation for improving the total fitness, welfare, and productivity of farm animals by breeding.
Adaptation, Biological↗
Endometrial biopsy as a guide to diagnosis of endometrial pathology in the mare.
A safe and simple technique of endometrial biopsy is described which the results suggest is a useful adjunct to the diagnosis of suspected pathological conditions of the uterus. In conjunction with other clinical data and a knowledge of the breeding history, histopathological findings form a basis for prognosis and treatment of the subfertile mare. A system of classification is presented as a basis for continuing work on the correlation of endometrial histopathology with fertility and breeding potential.
Animals↗
Genetic variation and relationships of eighteen Chinese indigenous pig breeds.
Chinese indigenous pig breeds are recognized as an invaluable component of the world's pig genetic resources and are divided traditionally into six types. Twenty-six microsatellite markers recommended by the FAO (Food and Agriculture Organization) and ISAG (International Society of Animal Genetics) were employed to analyze the genetic diversity of 18 Chinese indigenous pig breeds with 1001 individuals representing five types, and three commercial breeds with 184 individuals. The observed heterozygosity, unbiased expected heterozygosity and the observed and effective number of alleles were used to estimate the genetic variation of each indigenous breed. The unbiased expected heterozygosity ranged between 0.700 (Mashen) and 0.876 (Guanling), which implies that there is an abundant genetic variation stored in Chinese indigenous pig breeds. Breed differentiation was shown by fixation indices (FIT, FIS, and FST). The FST per locus varied from 0.019 (S0090) to 0.170 (SW951), and the average FST of all loci was 0.077, which means that most of the genetic variation was kept within breeds and only a little of the genetic variation exists between populations. The Neighbor-Joining tree was constructed based on the Nei DA (1978) distances and one large cluster with all local breeds but the Mashen breed, was obtained. Four smaller sub-clusters were also found, which included two to four breeds each. These results, however, did not completely agree with the traditional type of classification. A Neighbor-Joining dendrogram of individuals was established from the distance of -ln(proportions of shared alleles); 92.14% of the individuals were clustered with their own breeds, which implies that this method is useful for breed demarcation. This extensive research on pig genetic diversity in China indicates that these 18 Chinese indigenous breeds may have one common ancestor, helps us to better understand the relative distinctiveness of pig genetic resources, and will assist in developing a national plan for the conservation and utilization of Chinese indigenous pig breeds.
Alleles↗
The phylogeny of Chinese indigenous pig breeds inferred from microsatellite markers.
A genetic study of 32 local Chinese, three foreign pig breeds [Duroc (DU), Landrace and Yorkshire], and two types of wild boar (Hainan and Dongbei wild boar) based on 34 microsatellite loci was carried out to clarify the phylogeny of Chinese indigenous pig breeds. The allele frequencies, effective numbers of alleles, and the average heterozygosity within populations were calculated. The results showed that the genetic variability of the Lingao pig was the largest, while the Jiaxing pig was the lowest. The greatest distance between domestic pigs was found between Shanggao and DU pig and the shortest was found between Wuzhishan and Lingao pig, respectively. A neighbour-joining tree constructed from Modified Cavalli-Sforza genetic distances divided Chinese pigs into two clusters; four subclusters were also identified. Our results only partly agree with the traditional types of classification and also provide a new relationship among Chinese local pig breeds. Our data also confirmed that Chinese pig breeds have a different origin from European/American breeds and can be utilized in programmes that aim to maintain Chinese indigenous pig breeds.
Alleles↗
Do familial neural tube defects breed true?
The tendency for sibs affected by non-syndromal neural tube defect (NTD) to have the same type of lesion was assessed retrospectively in a series of 66 affected sibships from the west of Scotland. Different schemes were used to classify the lesions: in the simplest classification into either anencephaly (including anencephaly-spina bifida) or spina bifida there was a tendency for spina bifida to breed true. More detailed description of the NTD in 48 sibships permitted classification according to location on the neuraxis; in this scheme sibs had dissimilar lesions. In 48 sets of affected sibs the lesions were separable into high NTD, which had involvement above vertebral level T12, and low NTD, which did not extend above T12. Low lesions comprised a minority of the total and each one occurred in a sibship with a high lesion. These results do not support the idea that NTDs occurring above and below vertebral level T12 have a different genetic basis.
Anencephaly↗
Evidence for fine-scale genetic structure and estuarine colonisation in a potential high gene flow marine goby (Pomatoschistus minutus).
Marine fish seem to experience evolutionary processes that are expected to produce genetically homogeneous populations. We have assessed genetic diversity and differentiation in 15 samples of the sand goby Pomatoschistus minutus (Pallas, 1770) (Gobiidae, Teleostei) from four major habitats within the Southern Bight of the North Sea, using seven microsatellite and 13 allozyme loci. Despite its high dispersal potential, microsatellite loci revealed a moderate level of differentiation (overall F(ST)=0.026; overall R(ST)=0.058). Both hierarchical analysis of molecular variance and multivariate analysis revealed significant differentiation (P<0.01) between estuarine, coastal and marine samples with microsatellites, but not with allozymes. Comparison among the different estimators of differentiation (F(ST) and R(ST)) pointed to possible historical events and contemporary habitat fragmentation. Samples were assigned to two breeding units in the estuary and coastal region. Despite this classification, there were indications of a complex and dynamic spatiotemporal structure, which is, most likely, determined by historical events and local oceanic currents.
Alleles↗
Partner preferences in different aged female rhesus macaques (Macaca mulatta).
It has been suggested that there is a strong age-peer preference for social partners among aged human and nonhuman primates. The purpose of this investigation was to study the social pairings that occurred in a large (70 animal) social group of rhesus macaques. Six females in each of three age classifications (old, prime, and young adults) were observed during a breeding season and nonbreeding season to determine with whom these individuals interacted in socially affiliative ways. The study group was housed in a 38 X 38 m outdoor area and only naturally occurring interactions were observed. The results suggest strong cross-age partner preferences that affect the distribution of socially affiliative responses within the group. There was a strong preference for kin in all classes except prime aged sisters. Among nonkin only the infants were consistently preferred as target animals for socially affiliative responses.
Aging↗
Chemotherapeutic responses in dogs with lymphosarcoma and hypercalcemia.
Twelve dogs with lymphosarcoma and hypercalcemia were treated over a period of 36 months. Signs and laboratory findings were referable to hypercalcemia and azotemia. All dogs were staged, classified histologically, and given cytoreductive chemotherapy, using 5 drugs (vincristine sulfate, cytosine arabinoside, cyclophosphamide, L-asparaginase and prednisone). For azotemia, symptomatic therapy (0.9% NaCl solution and furosemide) was given. Seven dogs responded completely, with marked reduction of lymphadenopathy and return of serum calcium concentration to normal. Median duration of remission in this group was 48 days (range, 14 to 93), and median survival time was 112 days (range, 85 to 153). Five nonresponding dogs had less than 50% reduction in measurable tumor mass, although serum calcium concentration returned to normal. The median survival time for this group was 34 days (range, 23 to 68). Two of the nonresponders died from sepsis and another from disseminated intravascular coagulation. Response to therapy did not appear to be influenced by age, breed, sex, initial calcium concentration, degree of azotemia, or histologic classification.
Animals↗
[Studies of population genetic relationships among 24 Chinese and exotic pig breeds using AFLP analysis].
A total of 12 AFLP primer combinations were used to detect genetic variation of pooled DNA in a sample of 19 Chinese native pig breeds, 1 cultivated pig breed and 4 European and American pig breeds. The genetic similarity coefficient of 24 pig beeds was calculated from AFLP data, UPGMA cluster analysis was also performed. The 12 primer combinations generated more than 1000 bands, of which 208 bands were polymorphic, 17.3 polymorphic markers were detected by one primer combination on the average. Thirteen putative breed specific bands were produced in the pooled DNA of 8 pig breeds. The cultivated pig breed and 4 exotic pig breeds were clustere into one group, while 19 Chinese native pig breeds were gathered into the other group in the UPGMA tree. The result indicated that AFLP analysis had high assay efficiency index (Ai) and provided a valuable tool for assaying genetic diversity and breed characterization in pigs. Chinese native pig breeds and exotic pig breeds show remarkable genetic differentiation, which had farther genetic relationships. Nanchang White pig and Large White pig, Yushan Black pig and Yanshan Black pig had intimate genetic relationships with each other respectively, which were consistent with its breeding history, geographical distribution and RAPD analysis results. In addition, the reasons for cluster results of some pig breeds from AFLP data were not consistent with morphology, geographical distribution and existing classification were discussed.
Animals↗
Incidence, location and classification of 371 third carpal bone fractures in 313 horses.
The medical records and radiographs of all horses with a third carpal bone fracture admitted to The Ohio State University Veterinary Hospital from 1979 to 1987 were reviewed. Three hundred and seventy-one fractures were found in 313 horses; 57 percent were Standardbreds, 41 per cent were Thoroughbreds, and only 1.6 per cent were Quarterhorses. All were young racehorses (average age = 3.1 years). Third carpal fractures occurred more frequently in the right limb (60 percent) than the left limb (40 percent); Thoroughbreds had a greater right-left disparity (67.5 percent R, 27.1 per cent L). Fractures were classified according to their size and anatomical location within the third carpal bone: incomplete fractures of the radial facet (type 1, N = 39), large proximal chip fractures of the radial facet (type 2, N = 140), small proximal chip fractures of the radial facet (type 3, N = 18), medial corner fractures (type 4, N = 13), frontal plane slab fractures of the radial facet (type 5, N = 93), large frontal plane slab fractures involving both the radial and intermediate facets (type 6, N = 35), fractures of the intermediate facet (type 7 N = 13), and sagittal slab fractures (type 8, N = 20). The incidence of each fracture type was significantly different between Standardbreds and Thoroughbreds. Type 1 and 2 fracture were more common in Standardbreds; type 5 and 6 fractures were more common in Thoroughbreds. Differences between these two breeds are related to the different gaits at which they race. The classification more accurately describes the extent of injury and the variation in fractures observed in this study than the traditional division as chips or slabs. A high quality skyline projection is important in correctly identifying these fractures; over 10 percent of the fractures were detected only on this view.
Animals↗