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Gamma-range oscillations in backward-masking functions and their putative neural correlates.

Backward-masking functions have been hitherto categorized into two types, commonly named Type A and Type B. The analysis of a model of Retino-Cortical Dynamics produces the prediction that spatially localized stimuli should reveal an oscillatory metacontrast function. The predicted new type of metacontrast masking function was investigated in a psychophysical experiment. The results show oscillatory metacontrast functions with significant power in the gamma range (30-70 Hz). A marked decrease in the oscillations is observed when the spatial extent of the stimuli is increased. The theoretical basis of the study relates the oscillations found in the metacontrast function to gamma-range oscillations observed in scalp and intracerebral recordings. The qualitative agreement between the model and data provides support for this putative relationship.

Adult↗

[Specificity of functional changes of visual system at the early stage of involutional central chorioretinal dystrophy].

Involutional central chorioretinal dystrophy (ICCD) represents a disease of central zone of the retina in the persons of elderly and senile age that is characterized by bilateral affection and is one of the most widespread reasons for sight inability all over the world. The purpose of our research was to reveal specific symptoms of functional disturbance of the visual system at the early stage of ICCD. Clinical studies were based on the analysis of results 75 patients (142 eyes), at the age from 50 to 70 years with visual acuity 0.7-1.0., with "firm" drusen in 44 eyes, "soft" drusen in 51 eyes, "soft confluent" drusen in 47 eyes. Along with the routine ophtalmological methods of investigation, the psychophysical methods were used in order to study spatial contrast sensitivity (SCS) and color contrast sensitivity ("ON-OFF"). Specific functional changes of visual system at an early stage of ICCD are characterized by a reduction of spatial localization, infringement of topography of color and on-off contrast sensitivity. Possible explanation of the given fact is disturbance of fine exchange processes in a complex of photoreceptor-pigmentary epithelium, leading to the disturbance of the function of the retina's central cones. Thus, disturbance of spatial contrast, color and contrast sensitivity is a reliable diagnostic criterion allowing revealing the change of function of the retina's cone apparatus already at the early of ICCD.

Aged↗

31P chemical shift imaging of the regionally ischemic perfused heart.

The application of one-dimensional 31P chemical shift imaging to the study of the isolated perfused rat heart is described. Its applicability for the examination of regional ischemia in the isolated perfused rat heart is demonstrated. The data sets show clearly the localization to the ischemic and nonischemic regions of the heart. Such studies will permit the correlation of cardiac metabolism and function in a controlled manner that is not possible in the application of these techniques to the intact animal. In particular, the time resolution of the experiments will enable spatially localized metabolic studies to be performed during the onset of ischemia and during reperfusion.

Animals↗

Is the spatial deficit in strabismic amblyopia due to loss of cells or an uncalibrated disarray of cells?

We examine two competing explanations for the spatial localization deficit in human strabismic amblyopia, namely neural undersampling and uncalibrated neural disarray. An undersampling hypothesis would predict an associated deficit for contrast discrimination for which we find no evidence in strabismic amblyopia. A neural disarray hypothesis would predict an associated deficit in the degree to which stimuli appear spatially distorted. We find evidence for such a deficit in strabismic amblyopia. We propose that the spatial deficit in strabismic amblyopia is due to a filter-based distortion which is unable to be re-calibrated by higher visual centres.

Amblyopia↗

Mesangial deposition of type I collagen in human glomerulosclerosis.

The presence of type I collagen in both diffuse and nodular diabetic glomerular lesions has been examined using immunohistochemical and electron microscopic techniques. At the ultrastructural level, banded collagen fibrils were observed in the mesangium in all cases of nodular (Kimmelstiel-Wilson) sclerosis and in 60% of the diffuse sclerotic lesions. Antibodies against type I collagen were localized in the fibrotic interstitium and the mesangium in all cases examined. Staining with type I collagen antibodies occurred in glomeruli with intact Bowman's capsules, and was predominantly localized to areas immediately adjacent to mesangial cells. In cases of focal sclerosis of nondiabetic origin, banded collagen fibrils and staining with anti-type I collagen antibody were observed in all cases in which the segmental lesion was presented in the specimen. The pattern of antibody localization in both the diabetic lesions and focal sclerosis differed from that obtained using anti-type IV (basement membrane) collagen antibodies. These results demonstrate that type I collagen is among the extracellular matrix components that comprise the sclerotic glomerular lesions of both diabetic and nondiabetic origin. Furthermore, the spatial localization of this collagen type suggests mesangial cell origin.

Collagen↗

Adaptive resolution molecular-dynamics simulation: changing the degrees of freedom on the fly.

We present a new adaptive resolution technique for efficient particle-based multiscale molecular-dynamics simulations. The presented approach is tailor-made for molecular systems where atomistic resolution is required only in spatially localized domains whereas a lower mesoscopic level of detail is sufficient for the rest of the system. Our method allows an on-the-fly interchange between a given molecule's atomic and coarse-grained levels of description, enabling us to reach large length and time scales while spatially retaining atomistic details of the system. The new approach is tested on a model system of a liquid of tetrahedral molecules. The simulation box is divided into two regions: one containing only atomistically resolved tetrahedral molecules, and the other containing only one-particle coarse-grained spherical molecules. The molecules can freely move between the two regions while changing their level of resolution accordingly. The hybrid and the atomistically resolved systems have the same statistical properties at the same physical conditions.

Journal Article↗

Susceptibility induced MR line broadening: applications to brain iron mapping.

Magnetic susceptibility variations due to the presence of iron in neural tissue can result in a shift of local resonance frequency, decreased T2 resulting from water diffusion through local field gradients, and line broadening due to field inhomogeneity within a voxel. In this study, modified spin echo phase contrast pulse sequences were used to map proton resonance line widths in phantoms and in vivo. In agar gels containing varying concentrations of Fe3O4 (magnetite), line broadening mechanisms permitted accurate spatial localization of iron deposits from measurement of local resonance line widths. Furthermore, line widths estimated from the data were strongly correlated with iron concentrations, indicating the potential quantitative applications of the method. The technique was applied clinically to map iron in subacute brain hemorrhages. These data suggest that resonance line widths may be a useful measure of brain iron content.

Adult↗

Early developmental expression and experimental axis determination by the chicken Vg1 gene.

BACKGROUND: Genes of the transforming growth factor beta (TGF beta) superfamily have been implicated in the earliest steps of developmental patterning in vertebrates. In Xenopus, the Vg1 gene is a candidate for the initiator of axis formation: its RNA and protein are broadly but appropriately localized at the start of development, and processed Vg1 protein is a powerful inducer of organized axial tissue in blastular animal caps in vitro and when locally produced in vivo after injection of Vg1 mRNA into blastomeres. Site-specific proteolytic processing occurs ubiquitously for most TGF beta members, producing the active peptide ligand, but is tightly restricted, by unknown mechanisms, for endogenous Vg protein in Xenopus and zebrafish embryos. This restriction may be involved in the spatial localization of activity required for an organizing role. RESULTS: We have characterized an amniote (chick) orthologue of Vg1, cVg1, and examined its developmental expression. The early expression of cVg1 includes a phase broadly related to the known time and site of axis (primitive streak) initiation; the initial transcription of cVg1 is centred in the posterior marginal zone (PMZ), a region of the blastoderm known to contain the axial organizing activity at this stage. We also observed later neural and paraxial mesodermal expression of cVg1, which has not been described previously for Vg homologues in other vertebrates. We have grafted transfected COS cells, producing processed cVg1 protein, to peripheral positions around the chick early blastoderm. Such grafts initiate formation of morphologically complete primitive streaks, simulating the properties of grafts from the PMZ. CONCLUSIONS: In vertebrate development, Vg genes may be required for an evolutionarily conserved early step in positioning or induction of the axis.

Amino Acid Sequence↗

Distribution of parathyroid hormone-related protein (PTHrP) and type I parathyroid hormone (PTH) PTHrP receptor in developing mouse mandibular condylar cartilage.

The mandibular condylar cartilage undergoes endochondral bone formation and is an important growth site in the mandible. Parathyroid hormone-related protein (PTHrP) has received attention as a physiological regulator attenuating chondrocytic differentiation and preventing apoptotic cell death. In order to examine the localization of PTHrP and its receptor during fetal development of the condylar cartilage, an immunohistochemical study of PTHrP and the type I PTH/PTHrP receptor was carried out. At day 15 of gestation, the condylar cartilage was evident and some chondrocytes showed positive staining for PTHrP. At day 16, the cartilage was increasing in length and width, and PTHrP was localized in the flattened and hypertrophic cell layers. After day 17, when endochondral bone formation had already started, PTHrP was mainly observed in the flattened cell layer and in a few layers of the hypertrophic chondrocytes. The localization of the type I PTH/PTHrP receptor was similar to that of PTHrP on days 15 and 16, and was broadly distributed at day 18. Apoptotic chondrocytes were scarcely observed on days 15 and 16, and only a few cells were present in the erosion front at day 18. This temporal and spatial localization of PTHrP and the type I PTH/PTHrP receptor suggests that PTHrP is a possible autocrine/ paracrine factor regulating condylar chondrocytic differentiation during development.

Animals↗

The Gaussian derivative model for spatial-temporal vision: I. Cortical model.

How do we see the motion of objects as well as their shapes? The Gaussian Derivative (GD) spatial model is extended to time to help answer this question. The GD spatio-temporal model requires only two numbers to describe the complete three-dimensional space-time shapes of individual receptive fields in primate visual cortex. These two numbers are the derivative numbers along the respective spatial and temporal principal axes of a given receptive field. Nine transformation parameters allow for a standard geometric association of these intrinsic axes with the extrinsic environment. The GD spatio-temporal model describes in one framework the following properties of primate simple cell fields: motion properties, number of lobes in space-time, spatial orientation. location, and size. A discrete difference-of-offset-Gaussians (DOOG) model provides a plausible physiological mechanism to form GD-like model fields in both space and time. The GD model hypothesizes that receptive fields at the first stage of processing in the visual cortex approximate 'derivative analyzers' that estimate local spatial and temporal derivatives of the intensity profile in the visual environment. The receptive fields as modeled provide operators that can allow later stages of processing in either a biological or machine vision system to estimate the motion as well as the shapes of objects in the environment.

Animals↗

[Spatial perception of stimuli during unilateral exclusion of the temporal portion of the neocortex by cold].

Behavioral reaction of twelve cats were studied in conditions of inactivation by cold of the temporal area (AI, AII, Ep and partly I-T) of one hemisphere. A typical vestibular ataxy was observed: deflection of the cats when walking, circular movements in the direction of the inactivated temporal area. Orienting reactions both to acoustic and photic stimuli persisted, but their spatial localization was completely lost. In every case the animals exhibited a clear orienting reaction towards the inactivated hemisphere, regardless of the localization of the source of signal. Reactions ot pain and olfactory stimulations likewise proceded in one direction. such a one-sided perception of sounds in the case of inactivation by cold of the temporal neocortex of one hemispheres is apparently due to the functional elimination of contralateral auditory structures. Disturbance of adequate spatial perception of photic, pain and olfactory stimuli under similar conditions results from a sharp drop in the tone predominantly of the ipsilateral hemisphere.

Animals↗

Quantitative measurement of blood flow using cylindrically localized Fourier velocity encoding.

A procedure for the quantitative measurement of blood velocity was developed and evaluated in the portal vein, aorta, and vena cava of healthy volunteers. This procedure utilizes Fourier velocity encoding and can be performed with or without cardiac gating. The accuracy of velocity measurements is determined by the accuracy of the gradient subsystem. Flow measurements derived from the velocity measurement are further limited in their accuracy by the luminal cross-section measurement. Spatial localization is accomplished with an excitation pulse having a cylindrical rather than slab geometry. Data are acquired in the presence of a readout gradient to provide resolution along the cylindrical axis.

Aorta↗

Bioenergetic abnormalities associated with severe left ventricular hypertrophy.

Transmurally localized 31P-nuclear magnetic resonance spectroscopy (NMR) was used to study the effect of severe pressure overload left ventricular hypertrophy (LVH) on myocardial high energy phosphate content. Studies were performed on 8 normal dogs and 12 dogs with severe left ventricular hypertrophy produced by banding the ascending aorta at 8 wk of age. Spatially localized 31P-NMR spectroscopy provided measurements of the transmural distribution of myocardial ATP, phosphocreatine (CP), and inorganic phosphate (Pi); spectra were calibrated from measurements of ATP content in myocardial biopsies using HPLC. Blood flow was measured with microspheres. In hypertrophied hearts during basal conditions, ATP was decreased by 42%, CP by 58%, and the CP/ATP ratio by 32% in comparison with normal. Increasing myocardial blood flow with adenosine did not correct these abnormalities, indicating that they were not the result of persistent hypoperfusion. Atrial pacing at 200 and 240 beats per min caused no change in high energy phosphate content in normal hearts but resulted in further CP depletion with Pi accumulation in the inner left ventricular layers of the hypertrophied hearts. These changes were correlated with redistribution of blood flow away from the subendocardium in LVH hearts. These findings demonstrate that high energy phosphate levels and the CP/ATP ratio are significantly decreased in severe LVH. These abnormalities are proportional to the degree of hypertrophy but are not the result of persistent abnormalities of myocardial perfusion. In contrast, depletion of CP and accumulation of Pi during tachycardia in LVH are closely related to the pacing-induced perfusion abnormalities and likely reflect subendocardial ischemia.

Adenosine↗

Localized maternal and zygotic expression of the gene encoding Drosophila HMG D.

Eukaryotic high mobility group (HMG) proteins such as Drosophila melanogaster HMG D, are thought to be nonhistone components of chromatin. However, we have observed an unusual sequestering of HMG D maternal mRNA within the periphery of oocytes during late oogenesis and zygotic expression confined to the developing embryonic nervous system. Hence, rather than being ubiquitously expressed, HMG D transcripts display a complex pattern of temporal and spatial localization implying a specialized rather than general role during early fly development.

Animals↗

In Situ Association of Calvin Cycle Enzymes, Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase Activase, Ferredoxin-NADP+ Reductase, and Nitrite Reductase with Thylakoid and Pyrenoid Membranes of Chlamydomonas reinhardtii Chloroplasts as Revealed by Immunoelectron Microscopy.

The in situ localization of the chloroplast enzymes ribulose-1,5-bisphosphate carboxylase (Rubisco), Rubisco activase, ribose-5-phosphate isomerase, glyceraldehyde-3-phosphate dehydrogenase, aldolase, nitrite reductase, ferredoxin-NADP+ reductase, and H+-ATP synthase was studied by immunoelectron microscopy in Chlamydomonas reinhardtii. Immunogold labeling revealed that, despite Rubisco in the pyrenoid matrix, Calvin cycle enzymes, Rubisco activase, nitrite reductase, ferredoxin-NADP+ reductase, and H+-ATP synthase are associated predominantly with chloroplast thylakoid membranes and the inner surface of the pyrenoid membrane. This is in accord with previous enzyme localization studies in higher plants (K.H. Suss, C. Arkona, R. Manteuffel, K. Adler [1993] Proc Natl Acad Sci USA 90: 5514-5518). Pyrenoid tubules do not contain these enzymes. The pyrenoid matrix consists of Rubisco but is devoid of the other photosynthetic enzymes investigated. Evidence for the occurrence of two Rubisco forms differing in their spatial localization has also been obtained: Rubisco form I appears to be membrane associated like other Calvin cycle components, whereas Rubisco form II is confined to the pyrenoid matrix. It is proposed that enzyme form I represents an active Rubisco when assembled into Calvin cycle enzyme complexes, whereas Rubisco form II may be part of a CO2-concentrating mechanism. Pyrenoidal Calvin cycle complexes are thought to be highly active in CO2 fixation and important for the synthesis of starch around the pyrenoid.

Journal Article↗

Estimating the probability of the presence of a signal of interest in multiresolution single- and multiband image denoising.

We develop three novel wavelet domain denoising methods for subband-adaptive, spatially-adaptive and multivalued image denoising. The core of our approach is the estimation of the probability that a given coefficient contains a significant noise-free component, which we call "signal of interest." In this respect, we analyze cases where the probability of signal presence is 1) fixed per subband, 2) conditioned on a local spatial context, and 3) conditioned on information from multiple image bands. All the probabilities are estimated assuming a generalized Laplacian prior for noise-free subband data and additive white Gaussian noise. The results demonstrate that the new subband-adaptive shrinkage function outperforms Bayesian thresholding approaches in terms of mean-squared error. The spatially adaptive version of the proposed method yields better results than the existing spatially adaptive ones of similar and higher complexity. The performance on color and on multispectral images is superior with respect to recent multiband wavelet thresholding.

Algorithms↗

Central and reflex neuronal responses elicited by odor in a terrestrial mollusk.

1. We studied the responses to odor of a central olfactory processing organ and subsequent central outputs in the terrestrial mollusk Limax maximus. We used extracellular recording techniques and optical recording from preparations stained with a voltage-sensitive dye to characterize network responses in the central organ and whole nerve recording to characterize central odor-elicited outputs. 2. The central olfactory organ, the procerebral (PC) lobe, is a highly interconnected network of local olfactory interneurons that receives input from primary olfactory receptors. In the absence of odor the PC network is known to exhibit periodic waves of excitation and inhibition at a frequency of approximately 0.7 Hz. Here we study how different odor inputs affect the intrinsic oscillatory dynamics. 3. Odor stimulation causes the propagation of electrical activity along the lobe to transiently switch from the state with propagating waves, with typical phase shifts of one half cycle along the lobe, to a state with few or no phase differences along the lobe. The collapse of the phase gradient typically occurs without spatially localized changes in the amplitude of the oscillation, at least on the scale of our optical resolution, approximately 0.1 times the length of the lobe. In some trials, however, we resolved spatial nonuniformities in the magnitude of excitation across the lobe. 4. The collapse of the phase gradient along the lobe in response to odor stimulation is robust on a trial-by-trial basis. Further, the change in phase gradient can occur with little or no change in the frequency of oscillation, as occasionally observed in response to weak odor stimulation. 5. Typically odor stimulation causes changes in the frequency of the oscillation. Two odors, one attractive (potato) and one repellent (amyl acetate), produced different patterns of change; potato induced a transient increase in frequency, whereas amyl acetate produced an initial decrease in frequency followed by a transient increase in frequency. We do not yet know whether these frequency change patterns are unique to these specific odors or to their behavioral meaning. 6. Previous work demonstrated direct connections from the PC lobe to the buccal and pedal ganglia, centers controlling feeding and locomotion, respectively. To establish a correlation between odor-induced changes in the PC lobe and activation of such centers and subsequently effector organs, we recorded from selected central connectives and peripheral nerve roots. The dependence of odor-elicited activity recorded in connectives and nerve roots on PC integrity was assessed by measurements of odor-elicited activity before and after PC ablation. 7. Odor stimulation caused activation of multiple units in the cerebrobuccal connective. One output of the buccal ganglion, the salivary nerve, also showed odor-elicited activation of an identified unit, the slow burster. The necessity of the PC lobe for activation of the slow burster was established by measurements of odor-elicited activity before and after PC ablation. 8. Odor stimulation also caused activation of multiple units in the buccal mass retractor nerve. Activation of a fraction of these units (3 of 10) was dependent on an intact PC lobe, like the slow burster neuron in the salivary nerve. 9. Our results clearly show how stimuli may lead to changes in the spatial-temporal pattern of activity in a central circuit without changing the overall average level of activity in that circuit.

Animals↗

Automated morphometric study of brain variation in XXY males.

This paper studies brain morphometry variation associated with XXY males (Klinefelter's syndrome) by using an automated whole-brain volumetric analysis method. The application to 34 XXY males and 62 normal male controls reveals pronounced volume reduction in the brains of XXY males, relative to the brains of normal controls, localized at the insula, temporal gyri, amygdala, hippocampus, cingulate, and occipital gyri. Most of these statistically significant regions are in the gray matter structures, with the exception of one cluster of atrophy involved in white matter structure, i.e., right parietal lobe white matter. Compared to previous findings documented in the literature, our findings provide a better spatial localization of the affected regions. In addition to the reduction of local volume, overall enlargement of ventricles and overall volume reduction of both white matter and gray matter are also found in XXY males.

Adolescent↗