The comparative biochemistry of the organic matrix proteins of developing enamel. I. Amino acid composition.
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The kinetic parameters Km, k+2 and k+2/Km of the pancreatic ribonucleases (EC 3.1.4.22) from cow, giraffe, horse, rat and lesser rorqual have been determined, using 2',3'-cyclic cytidine monophosphate and 2',3'-cuclic uridine monophosphate as substrates. No large differences were found between the activities of the five enzymes. The relative differences between the activities of the five enzymes are mainly due to differences in the rates of hydrolysis and not to differences in the affinities for the substrates.
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Pancreatic tissue from topi (Damaliscus korrigum) contains three ribonuclease components in a ratio of 8:22:70. Two components are glycosidated, whereas the third one does not contain carbohydrate. The amino acid sequence of topi ribonuclease A was deduced from a tryptic digest of the performic acid-oxidized protein. Peptides were positioned by homology with other bovid ribonucleases. Only peptides that differed in amino acid composition from the corresponding peptides of bovine ribonuclease were sequenced. The evidence obtained for the sequence of residues 67-73 is incomplete. Among the bovid ribonucleases (cow, bison, eland, sheep, goat and gnu), topi ribonuclease shows the closest resemblance with sheep and goat ribonucleases; except that the glutamic acid residue at position 103 in the ribonucleases from sheep and goat is substituted by a lysine residue in topi. Topi ribonucleases A and B differ only in the presence of carbohydrate attached to asparagine 34.
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The amino acid sequences of the pancreatic ribonucleases from impala Thomson's gazelle, nilgai and two types of water buffalo were studied from several enzymic digests. Peptides were positioned by homology with other ribonucleases of known sequence. Only peptides that differ in amino acid composition from the corresponding peptides of ox and goat ribonuclease were sequenced. The primary structures of pancreatic ribonucleases from 11 species of the Bovidae family are known to date. The evolutionary rate of bovid ribonucleases is 2--3 times lower than the average rate observed in all mammals. A possible explanation is that the presence of a stable symbiotic system in the rumen of grass-eating ruminants has caused a slowing down of the evolutionary rate of pancreatic ribonuclease in this taxon. The subfamily of the Bovinae (five species) exhibits a slightly higher evolutionary rate; most replacements in the Bovinae occur near residues 34--36, the most commonly observed carbohydrate attachment site in ribonucleases.
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Comparative studies were done on the cytoplasmic domain of the band 3 protein in the red cell membranes of the the human and the llama. Two approaches were used: crosslinking with o-phenanthroline/CuSO4, and cleavage with 2-nitro-5-thiocyanobenzoate. o-Phenanthroline/CuSO4 crosslinks the band 3 polypeptide chains in the human; in contrast band 3 in the llama is minimally crosslinked by this agent. 2-Nitro-5-thiocyanobenzoate cleaves band 3 in the human into a 23,000-dalton fragment; a similar fragment is not generated from the llama band 3. These studies show that the cysteine residue located 23,000 daltons from the N-terminus of band 3 in the human involved in these reactions is unavailable for crosslinking and cleavage in the llama. Species differences in the cytoplasmic domain of band 3 may contribute to the unusual resistance of llama red cells to osmotic, chemical and physically-induced deformation.
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