Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “canopy”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 649 records · Page 36Linked to original sources

Population dynamics and within-plant distribution of the mite Calacarus flagelliseta (Acari: Eriophyidae) on papaya in Hawaii.

An important element in developing a management strategy for a new pest is the study of its seasonal dynamics and within-plant distribution. Here, we studied the mite Calacarus flagelliseta Fletchmann, De Moraes & Barbosa on papaya, Papaya carica L. (Caricaceae), in Hawaii to quantify 1) patterns of seasonal abundance, 2) its distribution across different vertical strata of the papaya canopy, and 3) shifts in its use of the upper versus the lower surfaces of papaya leaves. Nondestructive sampling conducted in two papaya plantings revealed that 1) populations of C. flagelliseta peak during the summer; 2) mites are most abundant in the middle and lower strata of the plant canopy, and least abundant on the youngest leaves found in the upper canopy; and 3) mites are found more predominantly on the upper leaf surfaces when overall population density peaks, suggesting that individuals move from the lower to the upper leaf surfaces when food resources on the lower leaf surface have been exploited by conspecifics. These results have significant implications for the development of sampling plans for C. flagelliseta in papaya.

Animals↗

Sampling plan for Diaphania spp. (Lepidoptera: Pyralidae) and for hymenopteran parasitoids on cucumber.

The objective of this work was to determine the best technique, sampling unit, and the number of samples to compose a conventional sampling plan for the cucurbit borers, Diaphania spp. (Lepidoptera: Pyralidae), and for hymenopteran parasitoids on cucumber. This research was carried out in 10 commercial cucumber crops fields from July to December 2000 in Tocantins, Minas Gerais State, Brazil (21 degrees 11' 15" S; 42 degrees 03' 45" W; altitude 363 m). The sampling methods studied were beating on a tray, direct counting of insects on the lower leaf surface, and whole leaf collection. Three sampling units also were studied: leaves from a branch located in the apical, median, or basal third of the canopy. The best sampling systems, which included the best technique and sampling unit, were determined based on the relative variance and the economic precision of the sampling. Once the best sampling systems were established, the numbers of samples to compose the conventional sampling plans were determined. The more suitable sampling system for the larvae of Diaphania spp. in cucumber plants was beating a leaf of the median third of the canopy on a plastic tray. One leaf must be sampled for every 50 plants in a crop. The more suitable sampling system for hymenopteran parasitoids in cucumber plants was to directly count the adults on one leaf of the median third of the canopy. One leaf must be sampled for every 74 plants in a crop.

Animals↗

Modeling seed dispersal distances: implications for transgenic Pinus taeda.

Predicting forest-tree seed dispersal across a landscape is useful for estimating gene flow from genetically engineered (GE) or transgenic trees. The question of biocontainment has yet to be resolved, although field-trial permits for transgenic forest trees are on the rise. Most current field trials in the United States occur in the Southeast where Pinus taeda L., an indigenous species, is the major timber commodity. Seed dispersal distances were simulated using a model where the major determinants were: (1) forest canopy height at seed release, (2) terminal velocity of the seeds, (3) absolute seed release, and (4) turbulent-flow statistics, all of which were measured or determined within a P. taeda plantation established from seeds collected from wild forest-tree stands at the Duke Forest near Durham, North Carolina, USA. In plantations aged 16 and 25 years our model results showed that most of the seeds fell within local-neighborhood dispersal distances, with estimates ranging from 0.05 to 0.14 km from the source. A fraction of seeds was uplifted above the forest canopy and moved via the long-distance dispersal (LDD) process as far as 11.9-33.7 km. Out of 10(5) seeds produced per hectare per year, roughly 440 seeds were predicted to be uplifted by vertical eddies above the forest canopy and transported via LDD. Of these, 70 seeds/ha traveled distances in excess of 1 km from the source, a distance too great to serve as a biocontainment zone. The probability of LDD occurrence of transgenic conifer seeds at distances exceeding 1 km approached 100%.

Ecology↗

Demography of northern flying squirrels informs ecosystem management of western interior forests.

We studied northern flying squirrel (Glaucomys sabrinus) demography in the eastern Washington Cascade Range to test hypotheses about regional and local abundance patterns and to inform managers of the possible effects of fire and fuels management on flying squirrels. We quantified habitat characteristics and squirrel density, population trends, and demography in three typical forest cover types over a four-year period. We had 2034 captures of flying squirrels over 41 000 trap nights from 1997 through 2000 and marked 879 squirrels for mark-recapture population analysis. Ponderosa pine (Pinus ponderosa) forest appeared to be poorer habitat for flying squirrels than young or mature mixed-conifer forest. About 35% fewer individuals were captured in open pine forest than in dry mixed-conifer Douglas-fir (Pseudotsuga menziesii) and grand fir (Abies grandis) forests. Home ranges were 85% larger in pine forest (4.6 ha) than in mixed-conifer forests (2.5 ha). Similarly, population density (Huggins estimator) in ponderosa pine forest was half (1.1 squirrels/ha) that of mixed-conifer forest (2.2 squirrels/ha). Tree canopy cover was the single best correlate of squirrel density (r = 0.77), with an apparent threshold of 55% canopy cover separating stands with low- from high-density populations. Pradel estimates of annual recruitment were lower in open pine (0.28) than in young (0.35) and mature (0.37) forest. High recruitment was most strongly associated with high understory plant species richness and truffle biomass. Annual survival rates ranged from 45% to 59% and did not vary among cover types. Survival was most strongly associated with understory species richness and forage lichen biomass. Maximum snow depth had a strong negative effect on survival. Rate of per capita increase showed a density-dependent response. Thinning and prescribed burning in ponderosa pine and dry mixed conifer forests to restore stable fire regimes and forest structure might reduce flying squirrel densities at stand levels by reducing forest canopy, woody debris, and the diversity or biomass of understory plants, truffles, and lichens. Those impacts might be ameliorated by patchy harvesting and the retention of large trees, woody debris, and mistletoe brooms. Negative stand-level impacts would be traded for increased resistance and resilience of dry-forest landscapes to now-common, large-scale stand replacement fires.

Animals↗

Mechanisms generating modification of benthos following tidal flat invasion by a Spartina hybrid.

Many coastal habitats are being substantially altered by introduced plants. In San Francisco Bay, California, USA, a hybrid form of the eastern cordgrass Spartina alterniflora is rapidly invading open mudflats in southern and central sections of the Bay, altering habitat, reducing macrofaunal densities, and shifting species composition. The invasion has resulted in significant losses of surface-feeding amphipods, bivalves, and cirratulid polychaetes, while subsurface feeding groups such as tubificid oligochaetes and capitellid polychaetes have been unaffected. In the present paper, we document the causes and mechanisms underlying the changes observed. Through a series of in situ manipulative experiments we examined the influence of hybrid Spartina canopy on a range of physical, chemical, and biological properties. The hybrid Spartina canopy exerted a strong influence on the hydrodynamic regime, triggering a series of physical, chemical, and biological changes in the benthic system. Relative to tidal flats, water velocity was reduced in hybrid patches, promoting deposition of fine-grained, organic-rich particles. The resulting changes in the sediment environment included increased porewater sulfide concentrations and anoxia, which led to poor survivorship of surface feeders such as bivalves, amphipods, and polychaetes. These are key taxa that support higher trophic levels including migratory shorebirds that feed on tidal flats. Altered flow in the Spartina canopy further contributed to changes in barnacle recruitment and resuspension of adult benthic invertebrates. Increased crab-induced predation pressure associated with Spartina invasion also contributed to changes in benthic invertebrate communities. Our results suggest that multiple physical, chemical, biotic, and trophic impacts of the Spartina invasion have resulted in substantial changes in benthic communities that are likely to have important effects on the entire ecosystem.

Animals↗

Vegetation stress detection through chlorophyll a + b estimation and fluorescence effects on hyperspectral imagery.

Physical principles applied to remote sensing data are key to successfully quantifying vegetation physiological condition from the study of the light interaction with the canopy under observation. We used the fluorescence-reflectance-transmittance (FRT) and PROSPECT leaf models to simulate reflectance as a function of leaf biochemical and fluorescence variables. A series of laboratory measurements of spectral reflectance at leaf and canopy levels and a modeling study were conducted, demonstrating that effects of chlorophyll fluorescence (CF) can be detected by remote sensing. The coupled FRT and PROSPECT model enabled CF and chlorophyll a + b (Ca + b) content to be estimated by inversion. Laboratory measurements of leaf reflectance (r) and transmittance (t) from leaves with constant Ca + b allowed the study of CF effects on specific fluorescence-sensitive indices calculated in the Photosystem I (PS-I) and Photosystem II (PS-II) optical region, such as the curvature index [CUR; (R675.R690)/R2(683)]. Dark-adapted and steady-state fluorescence measurements, such as the ratio of variable to maximal fluorescence (Fv/Fm), steady state maximal fluorescence (F'm), steady state fluorescence (Ft), and the effective quantum yield (delta F/F'm) are accurately estimated by inverting the FRT-PROSPECT model. A double peak in the derivative reflectance (DR) was related to increased CF and Ca + b concentration. These results were consistent with imagery collected with a compact airborne spectrographic imager (CASI) sensor from sites of sugar maple (Acer saccharum Marshall) of high and low stress conditions, showing a double peak on canopy derivative reflectance in the red-edge spectral region. We developed a derivative chlorophyll index (DCI; calculated as D705/D722), a function of the combined effects of CF and Ca + b content, and used it to detect vegetation stress.

Acer↗

Estimating yields of salt- and water-stressed forages with remote sensing in the visible and near infrared.

In arid irrigated regions, the proportion of crop production under deficit irrigation with poorer quality water is increasing as demand for fresh water soars and efforts to prevent saline water table development occur. Remote sensing technology to quantify salinity and water stress effects on forage yield can be an important tool to address yield loss potential when deficit irrigating with poor water quality. Two important forages, alfalfa (Medicago sativa L.) and tall wheatgrass (Agropyron elongatum L.), were grown in a volumetric lysimeter facility where rootzone salinity and water content were varied and monitored. Ground-based hyperspectral canopy reflectance in the visible and near infrared (NIR) were related to forage yields from a broad range of salinity and water stress conditions. Canopy reflectance spectra were obtained in the 350- to 1000-nm region from two viewing angles (nadir view, 45 degrees from nadir). Nadir view vegetation indices (VI) were not as strongly correlated with leaf area index changes attributed to water and salinity stress treatments for both alfalfa and wheatgrass. From a list of 71 VIs, two were selected for a multiple linear-regression model that estimated yield under varying salinity and water stress conditions. With data obtained during the second harvest of a three-harvest 100-d growing period, regression coefficients for each crop were developed and then used with the model to estimate fresh weights for preceding and succeeding harvests during the same 100-d interval. The model accounted for 72% of the variation in yields in wheatgrass and 94% in yields of alfalfa within the same salinity and water stress treatment period. The model successfully predicted yield in three out of four cases when applied to the first and third harvest yields. Correlations between indices and yield increased as canopy development progressed. Growth reductions attributed to simultaneous salinity and water stress were well characterized, but the corrections for effects of varying tissue nitrogen (N) and very low leaf area index (LAI) are necessary.

Agriculture↗

Photoperiod shift effects on yield characteristics of rice.

Edible yield must be maximized for each crop species selected for inclusion in the Controlled Ecological Life-Support System (CELSS) proposed by NASA to support long-term manned space missions. In a greenhouse study aimed at increasing biomass partitioning to rice (Oryza sativa L.) grain, plants of the high yielding semi-dwarf rice cultivar Ai-Nan-Tsao were started in pots under 8-h photoperiods at a density of 212 plants m-2. After different periods of time under 8-h photoperiods, pots were switched to continuous light for the remainder of the cropping cycle. Continuous light did not delay time to first panicle emergence (60 d) or time to harvest (83 d). There was a positive correlation between the length of continuous light treatments and nongrain biomass. Grain yield (1.6 +/- 0.2 g plant-1) did not increase in continuous light. Yield-efficiency rate (grain weight per length of cropping cycle, canopy volume, and weight of nongrain shoot biomass) was used to compare treatments. Small Ai-Nan-Tsao rice canopies grown under 8-h photoperiods were more efficient producers of grain than canopies grown under continuous light for a portion of the rice cropping cycle.

Biomass↗

Urea and(or) feather meal supplementation for yearling steers grazing limpograss (Hemarthria altissima var. 'Floralta') pasture.

The unique relationship between TDN and CP concentration (low CP relative to TDN) in the whole-plant of 'Floralta' limpograss (Hemarthria altissima) may provide an opportunity for improving cattle performance through protein supplementation. In each of three consecutive years, yearling Brahman x British crossbred steers (initial weight approximately 270 kg) grazed limpograss during the summer and fall (five steers per ha, three pasture replications per treatment) and were fed liquid cane molasses-based supplements (1.4 kg DM daily) alone, or containing urea and(or) hydrolyzed poultry feather meal. In yr 1 and 2, protein supplementation did not influence ADG. In these years, pasture availability was in excess at all times, and visual observations indicated that the upper canopy contained abundant leaf. Pasture samples collected in a manner to simulate grazing had in vitro organic matter disappearance (IVOMD):CP ratios ranging from 6.5 to 8.1, and plasma urea nitrogen concentration in the blood of steers fed no supplemental protein was high (10.6 to 15.9 mg/dL), both not suggestive of a situation where providing a protein supplement might improve animal performance. In yr 3, ADG was improved (P < 0.05) by protein supplementation. Forage availability was in excess at the beginning of the trial but declined significantly as the trial progressed. At the end of the trial, forage IVOMD:CP ratio (11.1) and plasma urea nitrogen values of steers fed no protein supplement (6.6 mg/dL) were both suggestive of a situation where providing supplemental protein might improve animal performance. Grazing management of limpograss pasture can affect canopy composition, thereby influencing cattle response to protein supplementation. In cases where limpograss is moderately grazed resulting in abundant leaf in the grazed horizon, dietary energy:protein ratio can be balanced, and positive responses to protein supplementation may not be observed. Where limpograss is grazed more intensively resulting in greater quantities of stem in the upper pasture canopy, an imbalance of dietary protein (low) relative to energy can develop, increasing the opportunity for enhancing cattle performance through protein supplementation.

Animal Feed↗

Comparison of mosquito trapping method efficacy for West Nile virus surveillance in New Mexico.

As part of the West Nile virus surveillance program for the state of New Mexico, 13 sites along the Rio Grande River were sampled for mosquitoes during spring and summer 2003. We evaluated 3 different trapping procedures for their effectiveness at capturing selected species of mosquitoes. The 3 methods used were a dry ice-baited Centers for Disease Control and Prevention (CDC) light trap set 1.5 m above the ground (standard method), a CDC light trap suspended within the forest canopy, and a gravid trap set on the ground. Thirteen sites were sampled for 10 1-night periods biweekly from May through September. The relative numbers of captured Culex tarsalis, Cx. salinarius, Cx. quinquefasciatus, and Aedes vexans as well as the numbers of total recorded captures of all species were compared for each trapping method. Significant differences were observed for each species by location and by trapping method. Culex tarsalis was most commonly caught in canopy or standard CDC traps, especially in cottonwood bosque. Culex salinarius was found most frequently in association with marshy water, and was most often caught in gravid or standard light traps. Culex quinquefasciatus was captured almost exclusively in gravid traps within urban areas. Aedes vexans was primarily sampled in standard CDC light traps and found most frequently in wooded areas near floodplains. With the exception of Cx. Quinquefasciatus, no species was collected significantly more frequently in gravid or canopy traps than in the standard CDC light trap. Our findings do not support altering the methods currently used in New Mexico, namely, the use of 1.5-m CDC light traps and gravid traps. An increased use of gravid traps seems to be warranted in monitoring urban vector populations (specifically Cx. quinquefasciatus and Cx. salinarius) that may be involved in human transmission.

Aedes↗

Variation in performance of the tree fern Cyathea caracasana (Cyatheaceae) across a successional mosaic in an Andean cloud forest.

In Andean forests, Cyathea caracasana grows across a range of successional habitats. This study documents variation in several measures of plant performance (stem growth, leaf production, leaf longevity, and spore production) in C. caracasana growing in open habitat, low-canopy secondary forest, and high-canopy secondary forest, based on 33 mo of observation. In open habitat, C. caracasana displayed significantly higher growth rates, leaf production rates, and leaf turnover than in either of the forested habitats. The highest rates of spore production were also observed in open-habitat individuals, with only one plant in the forest understory producing spores during the study. Despite low growth and no reproduction, I observed no mortality among ferns in the forest understory. These data show that C. caracasana performs best under conditions of full sun but can persist under the closed canopy. This suggests a life history in which periods of rapid growth, spore production, and recruitment in forest gaps alternate with low growth rate and persistence in the understory. A phylogenetic perspective suggests that the habitat flexibility, which might conventionally mark C. caracasana as a habitat generalist, is better interpreted as specialization for the dynamic forest in which it grows.

Journal Article↗

An approach to crop modeling with the energy cascade.

Use of plants in advanced life support requires models of crop growth to analyze data, to evaluate areas for improvement, and, for design and engineering, to predict the gas exchanges of crops. We used data from experiments at Utah State University and the Kennedy Space Center for wheat (Triticum aestivum L.) and examined it for time dependence of the major three components in the energy cascade: photosynthetic photon absorption, canopy quantum yield, and carbon use efficiency. From the Utah State data, we developed a model with a total of five trends: absorption increasing until canopy closure, then constant; quantum yield as constant, then decreasing during senescence; carbon use as constant. This system probably is the lower limit of simplicity to which a model can be reduced and yet provide substantial utility. We demonstrated this utility by using the model to predict photosynthesis and respiration for experiments at Kennedy Space Center. The most uncertainty arose in predicting a start time for the senescent decrease of canopy quantum yield. The model should be generally applicable to other crops grown in controlled environments, as a generic tool for the design of life support systems.

Biomass↗

[Water distribution and microclimatic effects of sprinkler irrigation on spring wheat field].

Measurements of sprinkler irrigation on spring wheat field indicated that spring wheat canopy could intercept water by 25-30%, and compared with that above canopy in first milking period, the uniformity coefficient below canopy could be increased by 7-9%. Floating and evaporation loss of sprinkler irrigation water could reach 20-25% of the total. In addition, sprinkler irrigation on spring wheat field could decrease air and soil temperature, and increase air actual vapor pressure and relative humidity, which played a definite role in restraining crop transpiration.

Microclimate↗

Interaction between pod age and position on damage to cowpea Vigna unguiculata by hemipteran pod-sucking bugs.

Laboratory and screenhouse studies were carried out to assess the relationship between pod age and pod position of cowpea and damage by different pod bug species. The coreids Clavigralla tomentosicollis Stäl and Riptortus dentipes Fabricius caused significant damage to young pods of cultivated genotypes, in contrast to the coreid Anoplocnemis curvipes Fabricius and the pentatomid Aspavia armigera Fabricius which exhibited minor feeding activity. Percent seed damage declined with pod age, the critical stage for pod bug infestation being when pods were about eight days old. Clavigralla tomentosicollis and R. dentipes caused significantly higher damage to pods located within the leaf canopy, thus behaving differently from Anoplocnemis curvipes which showed a distinct preference for pods growing above the leaf canopy. The feeding activity of Aspavia armigera was not affected by the position of pods on the plant. Overall, the study suggests that cowpea genotypes with a short flowering period and pods held above the leaf canopy offer the most promise in the management of pod-sucking pests.

Animals↗

Effect of plant spacing on the population of mosquito immatures in rice fields in Madurai, south India.

A study was conducted during 'Kuruvai' crop season from December 1992 to January 1993 in the rice fields of the Agricultural College and Research Institute, Madurai, Tamil Nadu to determine the influence of plant spacing and plant canopy on the populations of mosquito immatures. Three paddy varieties (ADT36, IR50 and IR20) were selected with two types of plant spacing, one with normal spacing (15 x 10 cm) and another wider (20 x 15 cm) than the normal spacing. Results showed that the field planted with normal spacing of paddy had significantly higher populations of culicine and anopheline immatures than the fields planted with wider spacing of paddy. The paddy varieties did not have any significant effect on the population of mosquito immatures. Light intensity, measured at the water surface using an illuminometer, was inversely related to the development of plant canopy and the results suggested that plant canopy does not inhibit oviposition by mosquitoes in the early stages of paddy growth, but it was responsible for the decline in the populations in the later stages of paddy growth. The plant spacing had a significant effect on the populations of chironomids and libellulids and other insects were not affected significantly.

Agriculture↗

[Acumen function in leaves and its vertical distribution in a tropical rain forest of Costa Rica].

Water retention on the leaf surface can be maladaptive to the plant because it increases the colonization of epiphylls and interferes with the physiologic processes of the leaf, diminishing the photosynthetic capacity. To test if leaf driptips facilitate leaf drying after rainfall in a tropical rain forest of Costa Rica, we (1) experimentally measured the capacity to retain water on leaf surfaces of 30 plant species before and after driptip removal, and (2) analyzed the development of driptips along forest strata. We expected leaf driptips to be less developed in the upper strata due to the environmental conditions of the canopy (i.e., high solar radiation, strong winds and low relative humidity), which favor the natural drying of leaves. The presence of driptips increased 100% the water run off capacity of leaves in all the analyzed species. Also, the development of leaf driptips was smaller in canopy species than in understory species. Additionally, they became less developed in canopy species as trees increased in height. These results support the hypothesis that the adaptive role of driptips is to facilitate the drying of leaf surfaces.

Costa Rica↗

[A mathematical model of water stress and light condition effects on cotton dry matter and yield formation].

A mathematical model was developed to analyze the effects of water stress and light condition on crop dry matter accumulation and yield formation based on canopy carbon net assimilation rate. The function leaf water potential (psi l) indicating the water status of canopy was incorporated into this model, according to the assumption that the canopy resistance (Rc) was increased under the conditions of water stress and low light density. Psi l was estimated by a simplified regression equation, in which, the independent variables were relative soil moisture (Aw), ambient temperature (Ta), and vapor pressure deficit (VPD). The aerodynamic resistance (Ra) in the model was defined as a function of wind speed (u), and the yield was calculated by a linear increase in harvest index (hi) with time. The modeled data agreed well with the data observed from pot experiment. Sensitivity analysis and simulation results suggested that the model could be useful in identifying environment factors, especially soil water content and light density effects on crop growth and yield formation.

Bombax↗

[A primary study on thermal effect of soil-plant-atmosphere continuum in tropical seasonal rain forest gap].

Made use of measurement data of microclimatic elements of canopy gap in tropical seasonal rain forest in fog-cool and dry-hot season in Xishuangbanna, the daytime characteristics of temporal-spatial distribution and variation of soil surface temperature, air temperature, and leaf temperature of understory plants in canopy gap were discussed. The finding showed that influenced by fog and solar altitude, the maximum value of microclimatic elements displayed at different site of gap in different time and season and there existed phenomenon about higher value area of leaf temperature dynamic displacement. In addition, the direction of heat transferring of soil-plant-atmosphere continuum varied with time and season, indeed at the same time, the different part of gap had the different heat transferring directions. The results would supply a research basis for further studying heat and water vapor transport, microclimatic formation, biodiversity and succession of canopy gap.

Hot Temperature↗