Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “Repositories”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 649 records · Page 36Linked to original sources
PubMed2006

Numerical simulation of reactive processes in an experiment with partially saturated bentonite.

Bentonites are preferred materials for use as engineered barriers for high-level nuclear waste repositories. Simulation of geochemical processes in bentonite is therefore important for long-term safety assessment of those repositories. In this work, the porewater chemistry of a bentonite sample subject to simultaneous heating and hydration, as studied by Cuevas et al. [Cuevas, J., Villar, M., Fernández, A., Gómez, P., Martín, P., 1997. Porewaters extracted from compacted bentonite subjected to simultaneous heating and hydration. Applied Geochemistry 12, 473-481.], was assessed with a non-isothermal reactive transport model by coupling the geochemical software PHREEQC2 with the object-oriented FEM simulator GeoSys/RockFlow. Reactive transport modelling includes heat transport, two-phase flow, multicomponent transport and geochemical reactions in the liquid phase, i.e. ion exchange, mineral dissolution/precipitation and equilibrium reactions. Simulations show that the easily soluble minerals in bentonite determine the porewater chemistry. Temperature affects both two-phase flow and geochemical reactions. Porosity change due to dissolution/precipitation is low during the experiment. However, changes of the effective porosity caused by bentonite swelling can be very large. The simulated results agree well with the experimental data.

Bentonite↗
PubMed2006

Antiplasmodial activity of Cylicodiscus gabunensis.

The antimalarial activity of ethanolic stembark extract of Cylicodiscus gabunensis was studied in vivo in mice infected with Plasmodium berghei berghei during early and established infections as well as for repository activity. The LD(50) of the extract was determined to be 223.6 mg/kg, while doses of 250 mg/kg and above were found to be lethal to mice. Cylicodiscus gabunensis extract (20-60 mg/kg/day) exhibited a significant (P<0.05) blood schizontocidal activity in 4-day early infection, repository evaluation and in established infection with a significant mean survival time comparable to that of the standard drug, chloroquine, 5 mg/kg/day. The stembark extract possesses a promising antiplasmodial activity, which can be exploited in malaria therapy.

Animals↗
PubMed2005

An assay on the effect of preliminary restoration tasks applied to a large TENORM wastes disposal in the south-west of Spain.

A large industrial wastes disposal site, where two phosphate rock processing plants release their wastes, located close to Huelva town (SW of Spain), has been partially submitted to restoration as a preliminary step in a possible decomissioning process. Due to the high natural radioactivity contents of these wastes, this repository is considered as a radiological anomaly, being actually considered as TENORM (technically enhanced naturally occurring radioactive materials). The efficiency of this restoration from the radiological point of view according to the new European regulatory framework was evaluated in this work. The results allow to conclude that, as a consequence of the partial restoration works, the external dose rate has been drastically reduced above the repository system. Nevertheless, special attention must be paid on the occupational factor to be applied to workers on the unrestored system. The application of a dosimetric model allows the prediction of the negative effects of using certain industrial wastes as a cover system in this restoration/mitigation task.

Calcium Sulfate↗
PubMed2006

Soil migration, plant uptake and volatilisation of radio-selenium from a contaminated water table.

The properties of (79)Se make it of likely potential importance in safety studies for geological disposal of radioactive wastes. Despite a substantial literature on toxic and nutritional aspects of selenium in the environment little consideration has been given to the behaviour of radioactive selenium and its potential transfer from a radioactive waste repository to the biosphere. Column experiments (15 x 50 cm), using a sandy loam soil, indicated that the upwards migration of (75)Se (as a surrogate for (79)Se) from a contaminated water table was dependent upon the redox status of the soil. Low redox conditions within the water table strongly limited upwards (75)Se soil migration, presumably due to the immobilisation of reduced Se species. Under natural conditions, (79)Se from a radioactive waste repository is therefore likely to accumulate at considerable depth. As a consequence, its absence from the rooting zone is likely to limit its transfer into plants. Nevertheless, the column experiments indicated that when an overlap between roots and soil contamination occurs, uptake into the plant is observed. Quantification of (75)Se volatilisation from the column surfaces suggested that this is a significant pathway by which (79)Se may move either directly from soil to the atmosphere, or from soil to plants and then to the atmosphere.

Lolium↗
PubMed2000

Integration of cytogenetic data with genome maps and available probes: present status and future promise.

The National Cancer Institute has established an initiative, called the Cancer Chromosome Aberration Project (Ccap), in order to link and integrate the physical and genetic maps of the human genome with cytogenetic data and the location of chromosomal rearrangements in human diseases. This goal will be achieved by high-resolution fluorescence in situ hybridization (FISH) mapping of colony-purified bacterial artificial chromosome (BAC) clones spaced at 1-to 2-Mb intervals across the entire genome. All BAC clones will be anchored on the physical map by the presence of a mapped sequence tagged site (STS). The generation of a publicly accessible clone repository will allow convenient distribution of these BACs. Ccap data can be correlated with other cancer-associated and genomic databases, such as the catalog of chromosomal aberrations in cancer and the emerging full genomic sequence. We anticipate that the use of Ccap clones will expedite and refine the mapping of chromosomal breakpoints. The eventual set of approximately 3,000 Ccap BACs should facilitate the production of BAC-containing DNA chips for assessing copy number of genomic segments by matrix comparative genomic hybridization. In addition, the repository will provide genome-wide tools for defining chromosomal aberrations in cytological specimens by interphase cytogenetics. The Ccap Web site illustrates goals and progress of this initiative (http://www.ncbi.nlm.nih.gov/CCAP/).

Chromosome Mapping↗
PubMed2003

Generation of humic and fulvic acid from Callovo-Oxfordian clay under high alkaline conditions.

Low-carbon-containing clay from four different depths (447 to 516 m) of the Meuse Haute Marne (MHM) site is kept in contact with alkaline solution simulating conditions expected from cement dissolution in the near-field of a nuclear waste repository. Original organic material in the clay consists mainly of aliphatic hydrophobic compounds basically without oxygen-containing functional groups. After contact with 'solid young fluid' (mimicking cement dissolution, initial pH 13.22) for approximately one and a half years, high concentrations of hydrophilic organic matter are found (243-355 mg DOC/L). Characterization by solubility behavior, UV/Vis absorption, IR and fluorescence properties show that the dissolved hydrophilic organic matter has the characteristic features of humic and fulvic acids. Estimation of humic and fulvic acid content via UV/Vis spectroscopy results in 97.5 (+/-9.7)% of DOC being humic and fulvic acid. The results indicate that this could be an important source of complexing mobile organic matter influencing the mobility of radionuclides in a nuclear waste repository under consideration for this site. Investigations were conducted under oxic conditions representing the situation in the excavation disturbed zone (EDZ) of an underground facility. Sample amounts were very small and thus some characterization results are partly of preliminary character.

Journal Article↗
PubMed2006

Data storage and analysis in ArrayExpress.

ArrayExpress is a public resource for microarray data that has two major goals: to serve as an archive providing access to microarray data supporting publications and to build a knowledge base of gene expression profiles. ArrayExpress consists of two tightly integrated databases: ArrayExpress repository, which is an archive, and ArrayExpress data warehouse, which contains reannotated data and is optimized for queries. As of December 2005, ArrayExpress contains gene expression and other microarray data from almost 35,000 hybridizations, comprising over 1200 studies, covering 70 different species. Most data are related to peer-reviewed publications. Password-protected access to prepublication data is provided for reviewers and authors. Data in the repository can be queried by various parameters such as species, authors, or words used in the experiment description. The data warehouse provides a wide range of queries, including ones based on gene and sample properties, and provides capabilities to retrieve data combined from different studies. The ArrayExpress resource also includes Expression Profiler (EP)-a microarray data mining, analysis, and visualization tool-and MIAMExpress-an online data submission tool. This chapter describes all major ArrayExpress components from the user perspective: how to submit to, retrieve from, and analyze data in ArrayExpress.

Animals↗
PubMed1998

Radiation protection recommendations as applied to the disposal of long-lived solid radioactive waste. ICRP Publication 81.

The present publication deals with the radiological protection of members of the public following the disposal of long-lived solid radioactive waste using the 'concentrate and retain' strategy. It covers options including shallow land burial and deep geological disposal. The recommendations made in this report apply to new disposal facilities.The main protection issue concerns exposure that may or may not occur in the far future, i.e. a situation of potential exposure. Constrained optimisation is the central approach to evaluating the radiological acceptability of a waste disposal system. In this context optimisation of protection is a judgmental process with social and economic factors being taken into account and should be conducted in a structured essentially qualitative way.Two broad categories of exposure situations have to be considered: natural processes and human intrusion. Application of the radiological protection criteria to these two categories of exposure situations is different.In the first case, assessed doses or risks arising from natural processes should be compared with a constraint of no more than about 0.3 mSv per year or its risk equivalent of around 10(-5) per year. With regard to human intrusion, understood here as inadvertent human intrusion, the consequences from one or more plausible stylised scenarios should be considered in order to evaluate the resilience of the repository to such events. The Commission considers that in circumstances where human intrusion could lead to doses to those living around the site sufficiently high that intervention on current criteria would almost always be justified, reasonable efforts should be made at the repository development stage to reduce the probability of human intrusion or to limit its consequences. In this respect, the Commission has previously advised that an existing(1) annual dose of around 10 mSv per year may be used as a generic reference level below which intervention is not likely to be justifiable. Conversely, an existing(1) annual dose of around 100 mSv per year may be used as a generic reference level above which intervention should be considered almost always justifiable. Similar considerations apply in situations where the thresholds for deterministic effects in relevant organs are exceeded.The conclusion of the report is that in the Commission's view, provided reasonable measures have been taken both to satisfy the constraint for natural processes and to reduce the probability or the consequences of inadvertent human intrusion, and technical and managerial principles have been followed, then radiological protection requirements can be considered to have been complied with.

Journal Article↗
PubMed2002

Characterization of flow and transport processes within the unsaturated zone of Yucca Mountain, Nevada, under current and future climates.

This paper presents a large-scale modeling study characterizing fluid flow and tracer transport in the unsaturated zone of Yucca Mountain, Nevada, a potential repository site for storing high-level radioactive waste. The study has been conducted using a three-dimensional numerical model, which incorporates a wide variety of field data and takes into account the coupled processes of flow and transport in the highly heterogeneous, unsaturated fractured porous rock. The modeling approach is based on a dual-continuum formulation of coupled multiphase fluid and tracer transport through fractured porous rock. Various scenarios of current and future climate conditions and their effects on the unsaturated zone are evaluated to aid in the assessment of the proposed repository's system performance using different conceptual models. These models are calibrated against field-measured data. Model-predicted flow and transport processes under current and future climates are discussed.

Climate↗
PubMed2003

Preliminary 3-D site-scale studies of radioactive colloid transport in the unsaturated zone at Yucca Mountain, Nevada.

The U.S. Department of Energy (DOE) is actively investigating the technical feasibility of permanent disposal of high-level nuclear waste in a repository to be situated in the unsaturated zone (UZ) at Yucca Mountain (YM), Nevada. In this study we investigate, by means of numerical simulation, the transport of radioactive colloids under ambient conditions from the potential repository horizon to the water table. The site hydrology and the effects of the spatial distribution of hydraulic and transport properties in the Yucca Mountain subsurface are considered. The study of migration and retardation of colloids accounts for the complex processes in the unsaturated zone of Yucca Mountain, and includes advection, diffusion, hydrodynamic dispersion, kinetic colloid filtration, colloid straining, and radioactive decay. The results of the study indicate that the most important factors affecting colloid transport are the subsurface geology and site hydrology, i.e., the presence of faults (they dominate and control transport), fractures (the main migration pathways), and the relative distribution of zeolitic and vitric tuffs. The transport of colloids is strongly influenced by their size (as it affects diffusion into the matrix, straining at hydrogeologic unit interfaces, and transport velocity) and by the parameters of the kinetic-filtration model used for the simulations. Arrival times at the water table decrease with an increasing colloid size because of smaller diffusion, increased straining, and higher transport velocities. The importance of diffusion as a retardation mechanism increases with a decreasing colloid size, but appears to be minimal in large colloids.

Colloids↗
PubMed2003

Geochemical evaluation of different groundwater-host rock systems for radioactive waste disposal.

The geochemical suitability of a deep bedrock repository for radioactive waste disposal is determined by the composition of geomatrix and groundwater. Both influence radionuclide solubility, chemical buffer capacity and radionuclide retention. They also determine the chemical compatibility of waste forms, containers and backfill materials. Evaluation of different groundwater-host rock systems is performed by modeling the geochemical environments and the resulting radionuclide concentrations. In order to demonstrate the evaluation method, model calculations are applied to data sets available for various geological formations such as granite, clay and rocksalt. The saturation state of the groundwater-geomatrix system is found to be fundamental for the evaluation process. Hence, calculations are performed to determine if groundwater is in equilibrium with mineral phases of the geological formation. In addition, corrosion of waste forms in different groundwater is examined by means of reaction path modeling. The corrosion reactions change the solution compositions and pH, resulting in significant changes of radionuclide solubilities. The results demonstrate that geochemical modeling of saturation state and compatibility of the host formation environment with the radioactive waste proves to be a feasible tool for evaluation of various sites considered as deep underground repositories.

Corrosion↗
PubMed2003

Uranium transport around the reactor zone at Bangombé and Okélobondo (Oklo): examples of hydrogeological and geochemical model integration and data evaluation.

The sites at Bangombé and Okélobondo (Oklo) in Gabon provide a unique opportunity to study the behaviour of products from natural nuclear reactions in the vicinity of reactor zones which were active around two billion years ago. The Commission of the European Communities initiated the Oklo Natural Analogue Programme. One of the principal aims was to study indications of present time migration of elements from the reactor zones under ambient conditions. The hydrogeological and hydrochemical data from the Oklo sites were modelled in order to better understand the geochemical behaviour of radionuclides in the natural system, by using independent models and by comparing the modelling outcome. Two modelling approaches were used: M3 code (hydrochemical mixing and mass balance model), developed by the Swedish Nuclear Fuel and Waste Management Company (SKB) and HYTEC (reactive transport model) developed by Ecole des Mines de Paris. Two different reactor zones were studied: Bangombé, a shallow site, the reactor being at 11 m depth, and OK84 at Okélobondo, situated at about 450 m depth, more comparable with a real repository location. This allowed the validation of modelling tools in two different sedimentary environments: one shallow, with a more homogeneous layering situated in an area of meteoric alteration, and the other offering the opportunity to study radionuclide migration from the reaction zone over a distance of 450 m through very heterogeneous sedimentary layers. The modeling results indicate that the chemical reactions retarding radionuclide transport are very different at the two sites. At Bangombé, the decomposition of organic material consumes oxygen and at Okélobondo the oxygen is consumed by inorganic reactions resulting, in both cases, in uranium retardation. Both modelling approaches (statistic with M3 code and deterministic with HYTEC code) could describe this situation. The goal of this exercise is to test codes which can help to describe and understand the processes taking place at the sites, validate the models with in situ data, and thus build confidence in the tools used for future site characterization. Ultimately, this allows identifying and selecting processes and parameters that can be used as input into repository performance assessment calculations and modelling exercises.

Environmental Monitoring↗
PubMedDate not supplied

Radionuclide transport simulation and uncertainty analyses with the saturated-zone site-scale model at Yucca Mountain, Nevada.

Evaluation of radionuclide transport in the saturated zone (SZ) to the accessible environment is an important component of performance assessment for the proposed radioactive waste repository at Yucca Mountain. Simulations of radionuclide migration in the SZ have been performed using the calibrated three-dimensional (3-D) SZ site-scale flow and transport model. An innovative particle-tracking method was used to simulate transport that includes the processes of advection, dispersion, matrix diffusion, and sorption. The uncertainties in groundwater flow and radionuclide transport were quantitatively evaluated to develop uncertainty distributions for key model parameters, and multiple realizations of the SZ system were simulated using the SZ site-scale model. The results of multiple realizations of radionuclide transport indicate significant aggregate uncertainty in transport times through the SZ. The simulated radionuclide mass breakthrough curves in the SZ have been coupled with other components of the repository system in Total System Performance Assessment (TSPA) analyses and constitute the means by which uncertainty in the SZ is incorporated into regulatory analyses. Regression analysis has been used to determine the sensitivity of radionuclide transport simulation results to the uncertainty of individual model input parameters. Results of the sensitivity analysis indicate that median radionuclide transport times were dominantly controlled by uncertainty in the specific discharge in the SZ, with sorption and retardation in the alluvium playing important roles for some radionuclides.

Forecasting↗
PubMedDate not supplied

Performance assessment model development and analysis of radionuclide transport in the unsaturated zone, Yucca Mountain, Nevada.

This paper describes the development and use of a particle-tracking model to perform radionuclide-transport simulations in the unsaturated zone at Yucca Mountain, Nevada. The goal of the effort was to produce a computational model that can be coupled to the project's calibrated 3D site-scale flow model so that the results of that effort could be incorporated directly into the Total System Performance Assessment (TSPA) analyses. The transport model simulates multiple species (typically 20 or more) with complex time-varying and spatially varying releases from the potential repository. Water-table rise, climate-change scenarios, and decay chains are additional features of the model. A cell-based particle-tracking method was employed that includes a dual-permeability formulation, advection, longitudinal dispersion, matrix diffusion, and colloid-facilitated transport. This paper examines the transport behavior of several key radionuclides through the unsaturated zone using the calibrated 3D unsaturated flow fields. Computational results illustrate the relative importance of fracture flow, matrix diffusion, and lateral diversion on the distribution of travel times from the simulated repository to the water table for various climatic conditions. Results also indicate rapid transport through fractures for a portion of the released mass. Further refinement of the model will address several issues, including conservatism in the transport model, the assignment of parameters in the flow and transport models, and the underlying assumptions used to support the conceptual models of flow and transport in the unsaturated zone at Yucca Mountain.

Calibration↗
PubMedDate not supplied

Estimation of past seepage volumes from calcite distribution in the Topopah Spring Tuff, Yucca Mountain, Nevada.

Low-temperature calcite and opal record the past seepage of water into open fractures and lithophysal cavities in the unsaturated zone at Yucca Mountain, Nevada, site of a proposed high-level radioactive waste repository. Systematic measurements of calcite and opal coatings in the Exploratory Studies Facility (ESF) tunnel at the proposed repository horizon are used to estimate the volume of calcite at each site of calcite and/or opal deposition. By estimating the volume of water required to precipitate the measured volumes of calcite in the unsaturated zone, seepage rates of 0.005 to 5 liters/year (l/year) are calculated at the median and 95th percentile of the measured volumes, respectively. These seepage rates are at the low end of the range of seepage rates from recent performance assessment (PA) calculations, confirming the conservative nature of the performance assessment. However, the distribution of the calcite and opal coatings indicate that a much larger fraction of the potential waste packages would be contacted by this seepage than is calculated in the performance assessment.

Calcium Carbonate↗
PubMedDate not supplied

Conceptual evaluation of the potential role of fractures in unsaturated processes at Yucca Mountain.

A wide array of field observations, in situ testing, and rock and water sampling (and subsequent analyses) within the unsaturated zone (UZ) of Yucca Mountain demonstrate the importance of fractures to flow and transport in the welded tuffs. The abundance of fractures and the spatial variability in their hydraulic properties, along with the heterogeneity within lithologic formations, make evaluation of unsaturated processes occurring within the potential repository horizon complex. Fracture mapping and field testing show that fractures are well connected, yet considerable variation is seen within and between units comprising the potential repository horizon with regard to fracture trace length, spacing, permeability, and capillarity. These variations have important implications for the distribution and movement of water and solutes through the unsaturated zone. Numerical models designed to assess such phenomena as unsaturated flow, transport, and coupled thermal-hydrological processes each require their own conceptual model for fracture networks, in order to identify the subset of all fractures that is relevant to the particular study. We evaluate several process-dependent conceptual models for fractures and identify the relevant fracture subsets related to these processes.

Forecasting↗
PubMedDate not supplied

Development of discrete flow paths in unsaturated fractures at Yucca Mountain.

We have carried out numerical modeling studies to investigate the development of discrete-fracture flow paths and flow-focusing phenomena in the unsaturated rock of the potential repository horizon at Yucca Mountain, Nevada. These studies are based on two- and three-dimensional (2-D and 3-D) numerical models using site-specific parameters. The 2-D and 3-D models use high-resolution spatial discretization to explicitly include effects of discrete fractures with stochastically developed fracture permeabilities and a continuum approach. The permeability field is generated based on air permeability measurements at various scales. For most of the cases considered, uniform infiltration with different average rates (1-500 mm/year) is prescribed at the top of the model, while variability in outflow at the bottom of the model is used to evaluate the degree of flow focusing. In addition, scenarios involving nonuniform infiltration at the top boundary, different permeability correlation lengths and different flow-allocation schemes were analyzed. The modeling results obtained from all of the cases showed a remarkably similar flow-focusing pattern at the repository horizon. Furthermore, tracer transport simulation results also revealed additional features of focused flow and transport through the fracture network.

Filtration↗
PubMed2004

Groundwater chemistry of the Okélobondo uraninite deposit area (Oklo, Gabon): two-dimensional reactive transport modelling.

The stability of uranium-bearing minerals in natural environments is of interest to evaluate the feasibility of radioactive waste repositories. The uraninite bodies, UO2(s), in the Oklo district (Gabon) are the result of a natural fission process, which took place 1970 Ma ago. These deposits can be regarded as natural analogues for spent fuel. One of the uraninite bodies, the Okélobondo deposit, is located at a depth of 300 m. Groundwater samples from boreholes located at shallow depths (100-200 m) show neutral to basic pH, anoxic conditions (Eh = 0.10 to -0.05 V) and are saturated with respect to uraninite. In contrast, deeper samples collected in the vicinity of the ore body are oxidising (Eh = 0.32-0.47 V), slightly basic (pH = 7.0-8.5) and undersaturated with respect to uraninite. These oxidising conditions at depth, if present under repository conditions, may affect the stability of uranium oxide. In order to improve our understanding of the observed site geochemistry, the available information on the lithology and groundwater flow was integrated in a reactive transport model. The chemical composition and the pH-Eh values of the water sampled above and in the western side of the Okélobondo deposit can be explained by the interaction of meteoric recharge with pelites, dolomites and sandstones. The dissolution of Fe(II)-silicates and the oxidation of the Fe(II)-aqueous species maintained the pH-Eh distribution along the Fe(2+)-Fe(OH)3(am) equilibrium, with the result that uraninite does not dissolve. This may explain the lower uranium content in the water samples from pelites and dolomites above the Okélobondo deposit. The high Mn/Fe ratio and the high pH-Eh values of the water sampled at depth, close to the Okélobondo deposit, suggest a control by the Mn(2+)-MnOOH(s) equilibrium. This control is attributed to the dissolution of a large rhodochrosite, MnCO3(s), and manganite, MnOOH(s) deposit in the recharge area on the eastern side.

Geological Phenomena↗