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At least 631 records · Page 35Linked to original sources

A mathematical model describing tannin-protein association.

A quantitative model is derived for tannin-protein binding and protein precipitation in solution. This model is based on the assumption that precipitation occurs when the number of tannin molecules associated with one protein molecule attains a critical value. Precipitation occurs at this point because tannin crosslinking causes formation of large protein aggregates. Analytical expressions were derived for the dependence of protein precipitate yields upon the concentrations of the protein and tannin in solution. This expression fits reasonably well the experimentally observed bell-shaped dependencies of bovine serum albumin or gelatin precipitation upon total protein and tannin concentrations.

Chemical Precipitation↗

A functional model of the human cardiac ventricle.

A quantitative model is presented which accurately reproduces the time activity curve of the human left ventricular blood pool. Four parameters receive numerical values and may be of clinical value.

Heart Ventricles↗

Improving medical diagnostic accuracy of ultrasound Doppler signals by combining neural network models.

There are a number of different quantitative models that can be used in a medical diagnostic decision support system including parametric methods (linear discriminant analysis or logistic regression), nonparametric models (k nearest neighbor or kernel density) and several neural network models. The complexity of the diagnostic task is thought to be one of the prime determinants of model selection. Unfortunately, there is no theory available to guide model selection. This paper illustrates the use of combined neural network models to guide model selection for diagnosis of ophthalmic and internal carotid arterial disorders. The ophthalmic and internal carotid arterial Doppler signals were decomposed into time-frequency representations using discrete wavelet transform and statistical features were calculated to depict their distribution. The first-level networks were implemented for the diagnosis of ophthalmic and internal carotid arterial disorders using the statistical features as inputs. To improve diagnostic accuracy, the second-level networks were trained using the outputs of the first-level networks as input data. The combined neural network models achieved accuracy rates which were higher than that of the stand-alone neural network models.

Adult↗

On-line simulations of models for backward masking.

Five simulations of quantitative models of visual backward masking are available on the Internet at http://www.psych.purdue.edu/-gfrancis/Publications/BackwardMasking/. The simulations can be run in a Web browser that supports the Java programming language. This article describes the motivation for making the simulations available and gives a brief introduction as to how the simulations are used. The source code is available on the Web page, and this article describes how the code is organized.

Computer Simulation↗

VentSim: a simulation model of cardiopulmonary physiology.

VentSim is a quantitative model that predicts the effects of alternative ventilator settings on the cardiopulmonary physiology of critically ill patients. VentSim is an expanded version of the physiologic model in VentPlan, an application that provides ventilator-setting recommendations for patients in the intensive care unit. VentSim includes a ventilator component, an airway component, and a circulation component. The ventilator component predicts the pressures and airflows that are generated by a volume-cycled, constant-flow ventilator. The airway component has anatomic and physiologic deadspace compartments, and two alveolar compartments that participate in gas exchange with two pulmonary blood-flow compartments in the circulatory component. The circulatory component also has a shunt compartment that allows a fraction of blood flow to bypass gas exchange in the lungs, and a tissue compartment that consumes oxygen and generates carbon dioxide. The VentSim model is a set of linked first-order difference equations, with control variables that correspond to the ventilator settings, dependent variables that correspond to the physiologic state, and one independent variable, time. Because the model has no steady state solution, VentSim solves the equations by numeric integration, which is computation intensive. Simulation results demonstrate that VentSim predicts the effects of a variety of physiologic abnormalities that cannot be represented in less complex models such as the VentPlan model. For a ventilator-management application, the time-critical nature of ventilator-setting decisions limits the use of complex models. Advanced ventilator-management applications may include a mechanism to select patient-specific models that balance the trade-off of benefit of model detail and cost of computation delay.

Computer Simulation↗

Confirmation of the rat model of chronic, moderately elevated intraocular pressure.

We have confirmed the usefulness of the rat model of chronic, moderately elevated intraocular pressure (IOP) for studying loss of retinal ganglion cells, and as a model for pharmacological neuroprotection studies that may be relevant to treating human glaucoma. By unilaterally cauterizing three episcleral vessels, as described previously in the literature by another laboratory, we observed an approximately 1.6-fold increase in IOP compared to the contralateral eye (18.6 vs 11.5 mm Hg, respectively). Elevated IOP persisted for 6 months without re-treatment. Cupping of the optic disk was observable by examination, in vivo. In 6 months, there was an approximately 40% loss of retinal ganglion cells in the peripheral retina. This model provides a reproducible and quantitative model for pharmacological experiments using neuroprotective agents.

Animals↗

A minimal limit-cycle model of hand kinematics in basket-ball-bouncing.

Using dynamical modelling tools, our objective was to derive a minimal dynamical model of hand movement in basket-ball-bouncing, and to evaluate the necessary adjustments in the model when height constraints are experimentally varied. Ten right-handed subjects performed four series of 30 balls bouncing with the feet at 0, 30, 60 and 90cm above the ground. Increasing height led to an increase in hand amplitude, cycle time and contribution of non-linear terms to the motion. Qualitative analyses of hand kinematics portrayed in phase and Hooke plane suggested a Van der Pol+Duffing limit-cycle model. Quantitative analyses revealed that this model was adequate and remained invariant when height was varied.

Adult↗

Adverse reproductive outcomes among male painters with occupational exposure to organic solvents.

OBJECTIVES: To assess the risks of reproductive disorders and birth defects in offspring of male painters with exposure to organic solvents, and to determine the shape of the dose-response relationship. METHODS: Random samples of painters and carpenters were drawn from workers affiliated with the Dutch Trade Union for Construction Workers, the Netherlands, 2001. Information on reproductive outcomes, occupational exposures, and lifestyle habits was retrospectively obtained through self-administered questionnaires filled in by 398 painters exposed to organic solvents in paints, thinners, and cleansers in the period of three months before the last pregnancy, and 302 carpenters with little or no exposure to solvents. A statistical model was used to estimate quantitative exposure measures. RESULTS: Workers employed as painters at three months before pregnancy had an increased risk (odds ratio 6.2, 95% CI 1.4 to 27.9) of congenital malformations in offspring compared to carpenters. There was a positive exposure-response trend with increasing exposure to organic solvents based on quantitative model predicted exposure estimates using toluene as a marker. There was some indication of an increased risk of functional developmental disorders in offspring among painters with intermediate and high model predicted exposure. The risk of low birth weight children seemed to be slightly increased among painters as well. Results for other reproductive outcomes (time to pregnancy, spontaneous abortion, and preterm birth) did not show increased risks. CONCLUSION: This study showed a positive association between paternal occupational exposure to organic solvents and congenital malformations in offspring. However, the small numbers of cases, especially when examining different exposure levels, as well as the self-reported nature of exposure and outcome variables, may hamper interpretation of the results.

Abnormalities, Drug-Induced↗

[Quantitative analysis on Radix Salviae miltiorrhizae by NIR].

OBJECTIVE: Rapid nondestructive determination of salvianolic acid B and tanshinone IIA in Radix Salviae Miltiorrhizae with near-infrared reflectance spectroscopy. METHOD: A quantitive model was built up with near-infrared diffuse reflectance spectroscopy. RESULTS: The RMSEP in quantitative calibration model for salvianolic acid B and tanshinone IIA were 0.259 and 0.0232 respectively. CONCLUSION: NIR technique can dispose the samples without complicated pretreatment. You can achieve the results rapidly and correctly. It owns many remarkable advantages that cannot be displayed by traditional analysis methods. It is qualified to rapidly analyze traditional Chinese medicine whose components are complex. NIR can control the quality in production process of traditional Chinese medicine.

Abietanes↗

Fluxes and metabolic pools as model traits for quantitative genetics. I. The L-shaped distribution of gene effects.

The fluxes through metabolic pathways can be considered as model quantitative traits, whose QTL are the polymorphic loci controlling the activity or quantity of the enzymes. Relying on metabolic control theory, we investigated the relationships between the variations of enzyme activity along metabolic pathways and the variations of the flux in a population with biallelic QTL. Two kinds of variations were taken into account, the variation of the average enzyme activity across the loci, and the variation of the activity of each enzyme of the pathway among the individuals of the population. We proposed analytical approximations for the flux mean and variance in the population as well as for the additive and dominance variances of the individual QTL. Monte Carlo simulations based on these approximations showed that an L-shaped distribution of the contributions of individual QTL to the flux variance (R(2)) is consistently expected in an F(2) progeny. This result could partly account for the classically observed L-shaped distribution of QTL effects for quantitative traits. The high correlation we found between R(2) value and flux control coefficients variance suggests that such a distribution is an intrinsic property of metabolic pathways due to the summation property of control coefficients.

Enzymes↗

Restricted ocular motility after orbital trauma--studies with an animal model.

OBJECTIVE: Our purpose was to develop a quantitative model of restricted ocular motility (fat adherence syndrome) in the pig orbit to facilitate research into pathogenesis and treatment. METHODS: Twenty eyes of 10 pigs were used in an attempt to create a fibrous adhesion between either the inferior rectus or the medial rectus muscle and the adjacent periorbita. Quantitative forced ductions were performed preoperatively and 6 weeks postoperatively with an electronic force gauge. RESULTS: Forced ductions displayed a linear relationship to displacement over the range tested, both preoperatively and postoperatively. Although increased resistance to forced ductions was produced in 10 of the 20 (50%) eyes, the average changes were not statistically significant. The absolute change in force (Postoperative--Preoperative) was linearly related to the amount of ocular rotation. Reproducibility of measurements was markedly improved by the use of a motorized forced duction apparatus compared with manual rotation. CONCLUSIONS: The results from this study, and those from previous work, suggest that the classic fat adherence syndrome is an uncommon event, even after significant soft tissue injury in the orbit. Further studies are needed to more completely define the risk factors and pathogenesis of the fat adherence syndrome and the suitability of the pig orbit as a model.

Adipose Tissue↗

A psychophysically motivated model for two-dimensional motion perception.

A quantitative model is developed to predict the perceived direction of moving two-dimensional patterns. The model incorporates both a simple motion energy pathway and a "texture boundary motion" pathway that incorporates response squaring before the extraction of motion energy. These pathways correspond to Fourier and non-Fourier motion pathways and are hypothesized to reflect processing in the V1-MT and V1-V2-MT pathway, respectively. A cosine-weighted sum of these pathways followed by competitive feedback inhibition accurately predicts the perceived direction for patterns composed of two cosine gratings at different orientations ("plaids"). The model also predicts direction discrimination, differences between foveal and peripheral viewing, changes in perceived direction with exposure duration, motion masking, and motion transparency.

Computer Simulation↗

A model of visible persistence and temporal integration.

A quantitative model of temporal integration and visible persistence is described and tested. The model treats visible persistence as resulting from processing activity within sustained visual channels whose temporal response is modelled using a second-order control system. Temporal integration of two successive stimuli is assumed to be enabled by the overlap between the two periods of activity and to be impaired by the non-overlapping activity. The model successfully predicts the effects of inter-stimulus interval and of stimulus duration on goodness of temporal integration.

Afterimage↗

Commentary: models of sleep regulation: successes and continuing challenges.

Quantitative models have been developed to describe salient aspects of human sleep regulation. The two-process model of sleep regulation and the thermoregulatory model of sleep control highlight the interaction between sleep homeostasis and circadian rhythmicity and the association between sleep and temperature regulation, respectively. These models have been successful and inspiring, but continuing progress remains dependent on rigorous testing of some of their basic assumptions. Whereas it has been established that EEG slow-wave activity is a marker of sleep homeostasis, its causal role in regulating the timing of sleep and wakefulness remains to be demonstrated conclusively. Likewise, the causal role of the temperature regulatory system in sleep timing requires further investigation. In both models, many parameters have yet to be associated with specific physiologic processes. This makes it challenging, at least within the framework of these models, to account for interindividual differences or age-related changes in such features as sleep duration and sleep timing, as well as changes in the phase angle between the sleep-wake cycle and accepted markers of the circadian pacemaker, such as the body temperature or melatonin rhythm. Although the models may describe adequately global sleep patterns and their circadian modulation, detailed modeling of the frequent short awakenings from, and the subsequent transitions back to, sleep, as well as the variation of the propensity to awaken across the ultradian non-REM-REM cycle, is not addressed. Incoporation of these aspects of sleep in mathematical models of sleep regulation may further our understanding of a key aspect of sleep regulation, that is, its timing.

Animals↗

Dynamical features of thermoregulatory model of sleep control.

We have developed a quantitative model of human sleep-wake rhythms based on a thermoregulatory feedback control mechanism modulated by two circadian oscillators. Homeostatic features of sleep regulation are realized through the heat memory which represents the history of the masking process associated with sleep-wake cycles: heat load during wake and heat loss during sleep. Simulations under entrained conditions showed that the model closely mimics well-known features of human sleep-wake rhythm, and that the homeostatic and the oscillatory aspects of the human circadian system are successfully integrated in our model. In this paper, parameter dependency of the model behavior is studied by simulations. Because of its physiology-based structure, the parameter dependency could show the possible underlying mechanism for the typical features of human sleep-wake rhythm. In addition, the model stability is analyzed by the linear system theory and the simulations, which establishes the stability condition and suggests that the presented simulation results are basically stable. These results are informative to apply our model to actual data of sleep-wake rhythms, and to interpret them from the physiological point of view.

Body Temperature Regulation↗

The ex-Wald distribution as a descriptive model of response times.

We propose a new quantitative model of response times (RTs) that combines some advantages of substantive, process-oriented models and descriptive, statistically oriented accounts. The ex-Wald model assumes that RT may be represented as a convolution of an exponential and a Wald-distributed random variable. The model accounts well for the skew, shape, and hazard function of typical RT distributions. The model is based on two broad information-processing concepts: (1) a data-driven processing rate describing the speed of information accumulation, and (2) strategic response criterion setting. These concepts allow for principled expectations about how experimental factors such as stimulus saliency or response probability might influence RT on a distributional level. We present a factorial experiment involving mental digit comparisons to illustrate the application of the model, and to explain how substantive hypotheses about selective factor effects can be tested via likelihood ratio tests.

Adolescent↗

Saturable repair models of radiation action in mammalian cells.

Most quantitative models of radiation action in mammalian cells make the implicit assumption that all relevant repair processes proceed in a dose-independent manner. Thus it is implicitly assumed that the repair processes (1) follow totally unsaturated kinetics, (2) are not themselves inactivated by the radiation, and (3) are not enhanced by the presence of radiation damage. Contradiction of any of these three assumptions could have important theoretical and practical implications. The possible relevance of (1) and (2) in mammalian cells is discussed by considering a selection of saturable repair (and related) models. Repair inactivation is improbable, but repair saturation provides a ready explanation of common radiobiological phenomena without the need for the existence of "sublethal" damage. Furthermore, such models can "explain" additional phenomena which appear as contradictions to some sublethal damage models. Recent experiments by Wheeler and Wierowski have demonstrated the existence of dose-dependent repair of DNA damage in mammalian cells.

Animals↗

Acyl-enzymes as thrombolytic agents in dog models of venous thrombosis and pulmonary embolism.

A quantitative model of venous thrombosis in the beagle dog is described. The model was adapted to permit ageing of isolated experimental clots in vivo. A model of acute pulmonary embolism in this species is also described. In the venous thrombosis model, infusion of streptokinase (SK) or SK-activated human plasmin gave significant lysis but bolus doses of SK. plasmin complex were ineffective. Active site anisoylated derivatives of SK. plasminogen complex, SK-activated plasmin and activator-free plasmin were all active when given as bolus doses in both models. At lytic doses, the acyl-enzymes caused fewer side-effects attributable to plasminaemia than the corresponding unmodified enzymes.

Animals↗