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Site-directed mutagenesis of the active site cysteine in Klebsiella aerogenes urease.

Cysteine 319 in the large subunit of Klebsiella aerogenes urease was identified as an essential catalytic residue based on chemical modification studies (Todd, M.J., and Hausinger, R.P. (1991) J. Biol. Chem. 266, 24327-24331). Through site-directed mutagenesis, this cysteine has been changed independently to alanine, serine, aspartate, and tyrosine. None of these mutations (C319A, C319S, C319D, and C319Y, respectively) affected the size or level of synthesis of the urease subunits as monitored by polyacrylamide gel electrophoresis. The wild type enzyme and each of the mutant proteins was purified and their properties were compared. The C319Y protein possessed no detectable activity, while activity was reduced in C319A, C319S, and C319D to 48, 4.5, and 0.03% of wild type levels under normal assay conditions. All of the active mutants had a small increase in Km when compared to the wild type value. The active mutants displayed a greatly reduced sensitivity to inactivation by iodoacetamide in comparison to the wild type enzyme, confirming our previous assignment of the essential cysteine to this residue based on active site peptide mapping. In contrast to the wild type enzyme, inactivation of the mutant proteins was not affected by the presence of the competitive inhibitor phosphate, suggesting that the remaining slow rate of iodoacetamide inactivation is due to modification away from the active site. The pH dependence of urease activity was substantially altered in the active mutants with C319S and C319D showing a pH optimum near 5.2, and C319A near 6.7, compared to the pH 7.75 optimum of wild type urease. These data are consistent with Cys-319 facilitating catalysis at neutral and basic pH values by participating as a general acid.

Base Sequence↗

[Study of immobilization and properties of urease for creation of a biosensor based on semiconductor structures].

Many-sided investigations of urease immobilization methods were carried out to create the biosensor devices on the base of semiconductor structures. Special attention was concentrated on the biomembrane formation by means of urease and bovine serum albumin (BSA) cross-linking by gaseous glutaraldehyde. Optimal conditions for the formation process were selected which preserve about 20% of total urease activity after the cross-linking. The properties of enzyme immobilized by the above-mentioned method have been comprehensively studied. They included the urease activity dependence on pH, ionic strength, incubation buffer capacity as well as the enzyme stability during its functioning, storing and thermoinactivation. As was shown, for immobilized ureas Km value for urea at pH 7.0 and 20 degrees C is 1.65 time less than for free enzyme. In the presence of EDTA (1 mM) the enzyme activity in the biomembrane is practically unchanged under a month storing. Biomembrane possesses good adhesion to silicon surface and its swelling level under different conditions does not exceed 35%. The conclusion is made about the prospects of the used method of biomembrane formation for biosensor technology based on semiconductor structures.

Enzyme Stability↗

[The preparation and application of cross-linked urease aggregates].

Urease was immobilized in a simple and effective way by physical aggregation using a precipitant-ammonium sulfate, followed by chemical cross-linking using a bifunctional reagent-glutaraldehyde to form insoluble Cross-linked urease aggregates (CLUAs). The optimum pH, optimum temperature and Km of CLUAs were 8.0, 70 degrees C and 0.021 mol/L respectively. Compared with that of free urease, the thermal stability, storage stability and resistance of cross-linked urease aggregates to the exogenous proteolysis were enhanced. The efficacy of CLUAs for the treatment of rats with chronic renal failure was also studies. The rats with chronic renal failure caused by adenine were divided into 3 groups randomly:the control group (fed with 10 mL water /kg per day), Coated Aldehyde Oxystarch (CAO) group (fed with 20 g CAO /kg and 10 mL water /kg per day) and CLUAs + CAO group (fed with 20 g CAO /kg and 10 mL CLUAs /kg per day) in which CAO was used to absorb the ammonia produced from urea. The contents of BUN and Scr in serum before and after 2 weeks treatment were determined. In three groups, the level of Scr decreased slightly (P = 0.922, 0.972 and 0.225 > 0.05 respectively) after treatment. The level of BUN was not changed (P = 0.211 > 0.05) in the control group, but decreased greatly BUN in both CAO group and CLUAs + CAO group (P = 0.004 < 0.05 and P < 0.001 respectively). Furthermore, the decrease of the BUN level after treatment in the CLUAs + CAO group was more remarkable than that in the CAO group (P = 0.016 < 0.05), which showed that the CLUAs + CAD system was more efficient than the CAO system for the removal of urea in serum.

Adenine↗

[X-ray microanalysis of the activity of immobilized urease on chitosan membrane].

The localization of the activity of immobilized urease on chitosan membrane was studied by X-ray microanalysis. BaCl2 and urea were selected as the capture and substrate respectively. The substrate was hydrolyzed by immobilized urease to produce NH3 and CO2 in Tris-HCl buffer (pH 7.0), and the latter was captured by BaCl2 to form precipitate. The precipite was deposited on the active site of immobilized urease. It is shown that the method is practicable and reliable. The optimum condition for the localization of activity of immobilized urease was studied.

Ammonia↗

Urease activity in the contents and tissues of the sheep, pig and chicken gastrointestinal apparatus.

Urease activity, expressed as mg N-NH3/g dry weight per 30 min at 25 degrees C, was determined in the various parts of the sheep, chicken and pig digestive apparatus. The results were as follows. Sheep: contents--rumen 1.25"/-0.09, reticulum 0.78+/-0.02, omasum 0.44+/-0.02, abomasum 0.002+/-0.001, duodenum 0.003+/-0.001, jejunum 0.18+/-0.03, ileum 0.42+/-0.03, caecum 1.34+/-0.11, colon 0.76+/-0.08, walls-rumen 0.88+/-0.16, reticulum 0.38+/-0.04, omasum 0.11+/-0.02, abomasum 0.01+/-0.002, ileum 0.092+/-0.01, caecum 0.14+/-0.03, colon 0.16+/-0.02. Chicken: contents--jejunum 0.028+/-0.009, ileum 0.043+/-0.013, caecum 0.17+/-0.03, colon and cloaca 0.04+/-0.013. Pigs: contents--jejunum 0.02+/-0.01, ileum 0.14+/-0.08, caecum 0.62+-0.12, colon 0.43+/-0.06. No urease activity was found in the walls of the digestive apparatus or the contents of the duodenum in chickens, or in the walls of the stomach and intestine and the contents of the duodenum in pigs. The results show that urease activity in the digestive apparatus of pigs and poultry is lower than in sheep. Inadequate urease activity in the digestive apparatus explains why chickens and pigs are significantly less capable than ruminants of utilizing urea nitrogen as a substitute for some of the protein in the diet.

Abomasum↗

[Comparative characteristic of activity of urease, incorporated into polysiloxane hydrogels and xerogels, obtained by sol-gel technique].

Polysiloxane hydrogels with incorporated urease (degree of immobilization is 79-88%) that retains fermentative activity at the level of 56-84% were obtained by sol-gel technique. An influence of polysiloxane matrix functionalization on a degree of incorporation, activity retention and a factor of efficiency of urease immobilization was studied. Polysiloxane matrix functionalization with methyl groups causes decreasing a degree of ferment immobilization and a factor of immobilization efficiency. Functionalization of polysiloxane matrix with 3-aminopropyl groups leads to practically quantitative incorporation of the enzyme. And the highest degree of urease activity retention and maximal factor of its immobilization were observed at 3-aminopropyl groups content in polysiloxane matrix equals 2-5% (mol.). Transformation of hydrogels into xerogels via vacuum drying causes decreasing urease fermentative activity on nearly 2 orders.

Enzymes, Immobilized↗

[Urease test for rapid demonstration of Helicobacter pylori in biopsies from the pyloric antrum].

Helicobacter pylori (HP) is an important etiological factor in chronic gastritis and duodenal ulceration. Demonstration of HP by means of culture and histological examination is relatively time-consuming. The object of this investigation was to assess the validity of two rapidly read chemical tests: the buffered urease reagent (BR) and the unbuffered urease reagent (UBR) in demonstration of HP among patients referred for gastroscopy on account of upper abdominal dyspepsia. In 230 sets of biopsies investigated for HP by culture and histology, the following results were obtained by reading of the BR test three hours later at room temperature: Nosographic sensitivity 0.54, nosographic specificity 0.97, PVpos 0.93 and PVneg 0.71. In another material consisting of 57 sets of biopsies, both BR and UBR were performed. Reading of UBR after 15 minutes yielded the following results: Nosographic sensitivity 0.56, nosographic specificity 1.00, PVpos 1.00 and PVneg 0.61. It is concluded that positive results of the urease tests indicate the presence of HP. If the urease tests are negative, supplementary culture and/or histological examination for HP should be performed. UBR is preferable rather than BR.

Bacteriological Techniques↗

[Lactic acid production and urease activity in strains of Enterococcus faecium found in the rumen and their genetic stability].

Lactic acid production, urease activity and genetic stability were investigated in five selected rumen strains of Enterococcus faecium. The average value of urease activity in the tested strains was 16.5 +/- 0.953 nkat per ml, two strains were urease-negative. The values of E. faecium strains produced lactic acid ranged from 1.087 +/- 0.134 to 1.787 +/- 0.213 mmol per 1 l. Cultivation of the strains in ethidium bromide (EB) eliminated urease activity of these strains already in the first subculture, but the elimination effects of sodium dodecyl sulphate (SDS) and acridine orange (AO) were manifested later on (1-8 subcultures). Lactic acid production was eliminated in all strains from 1st to 8th subculture after cultivation in SDS, EB and also AO.

Animals↗

Production of murine hybrid-hybridomas secreting bispecific monoclonal antibodies for use in urease-based immunoassays.

To produce bispecific antibodies (BiAbs) for enzyme immunoassay (EIA) to replace antibody-enzyme conjugates, we developed a panel of 8-azaguanine/ouabain-resistant anti-urease variant hybridoma cell lines for use in hybridoma-hybridoma fusions. These variants represent mouse immunoglobulin subclasses IgM, IgG1, IgG2a, and IgG2b and have growth rates equal to those of the parental hybridomas. We fused an anti-urease-secreting variant hybridoma with an anti-human choriogonadotropin (hCG)-secreting hybridoma (both of IgG1 subclass) and selected the desired product with growth media containing hypoxanthine-aminopterin-thymidine (HAT) and ouabain. Over 95% of the resulting hybrids secreted anti-urease, and 60% of these secreted anti-hCG. The bispecific nature of secreted antibodies was demonstrated in a simultaneous EIA where BiAbs, hCG, and urease (EC 3.5.1.5) were incubated together in anti-hCG-coated microwells. As little as 25 int. units of hCG per liter could be reliably detected, which is equivalent to that for antibody-enzyme conjugates in EIA.

Animals↗

[Urease activity of bacteria in urine].

Urea splitting bacteria are related to the formation of struvite or apatite. We investigated the urease activity of bacteria by two methods; the direct measurement of urease activity of viable bacteria and sonicated bacteria from amounts of ammonia by the indophenol method, and the measurement of urease activity by alkalization of infected urine. Proteus mirabilis and Pseudomonas aeruginosa had moderate activity of urease, and Morganella morganii and Staphylococcus epidermidis had the most powerful activity. P. mirabilis caused the strongest alkalization in infected urine.

Humans↗

Urease activity in the genus Bifidobacterium.

The urease activity of 414 strains representing 21 species of the genus Bifidobacterium was surveyed. The strongest ureolytic strains belong mostly to the species B. suis and only a few to B. breve, B. magnum and "subtile" homology group. The study of some strongly ureolytic strains showed that urea and organic nitrogen concentration did not influence urease production. The high urease activity found also in the absence of urea suggested that this enzyme is not inducible. An ammonia concentration of 14 mM did not repress urease activity.

Actinomycetaceae↗

Impact of Escherichia coli on urine citrate and urease-induced crystallization.

Escherichia coli (E. coli) is usually not a urease producer. It is, however, often cultured in urinary phosphate containing calculi including ammonium magnesium phosphate stones. This suggests the possibility that E. coli might be involved in stone forming process. The effect of E. coli on urine citrate and urease-induced crystallization in human urine has been studied in vitro. E. coli was found to strongly reduce urine citrate (after 48 hours). In the E. coli inoculated samples, the urease-induced crystallization was increased. There was a strong correlation, r = 0.8, between the citrate decrease and the increase in calcium precipitation. The results indicate that E. coli and the reduced urine citrate influences urease-induced crystallization in vitro.

Citrates↗

Copper-induced changes in the urea uptake and urease activity in the cyanobacteria Anabaena doliolum and Anacystis nidulans: interaction with sulphur containing amino acids.

Copper-induced changes in the urea uptake and urease activity have been investigated in the cyanobacteria Anabaena doliolum and Anacystis nidulans. Copper, at and above 5 mumol/L concentration, inhibited urea uptake and urease activity systems in both the cyanobacteria in a concentration dependent manner. However, the urea uptake and urease activity systems in A. nidulans appeared slightly more tolerant to copper than than of A. doliolum. The inhibitory effect of copper on urea uptake and urease activity was mitigated by sulphur containing amino acids (cystine and cysteine), however, methionine could not do so, indicating the involvement of sulfhydryl (-SH) groups in the assimilation of urea in cyanobacteria.

Amino Acids, Sulfur↗

A biopsy urease test in the detection of Helicobacter pylori: comparison of antral and body specimens.

BACKGROUND: This study was to compare the difference of positive rate and reaction time between the antrum and the body specimens in duodenal ulcer (n = 124) and non-duodenal ulcer (n = 181) patients. METHODS: A total of 305 subjects with positive urease test were evaluated. During endoscopy each biopsy specimen from the greater curvature side of the antrum and the body was immediately incubated in a thermostatically controlled 37 degrees C waterbath and examined regularly in the first 6 h, and if there was no response, reexamined after 24 hours. A change from orange to pinkish red was considered positive. RESULTS: There was no difference in the positive rate of urease test between the antrum and the body in patients with duodenal ulcer (95.2% vs. 94.4%); whereas, the positive rate was higher in the body specimens than in the antral specimens in patients without duodenal ulcer (p < 0.05, 97.8% vs. 89%). Antral specimens had more rapid color change of urease test than the body specimens patients with duodenal ulcer; whereas no such difference was found in patients without duodenal ulcer. In the antral specimens of patients without duodenal ulcer who were less than 60 years old, the color change was more rapid than in those older than 60 (median 1.0 hr vs. 1.5 hr, p < 0.05). CONCLUSIONS: For better detection of H. pylori colonization using a urease test, it is critical to choose a suitable biopsy site. In non-duodenal ulcer disease, biopsy of the greater curve of the body has a higher detection rate than that of the antrum. In duodenal ulcer disease, biopsy of the antrum is better than that of the body for its quicker reaction.

Adolescent↗

[An enzyme-linked immunosorbent assay for the detection of IgG antibodies against urease of Helicobacter pylori].

We have developed an enzyme-linked immunosorbent assay (ELISA) for the detection of IgG antibodies against Helicobacter pylori (HP) using purified HP urease as an antigen. The urease was purified from ultrasonicated extract of HP by NaCl linear gradient system on DEAE-Sepharose 4B chromatography. Two molecular weight bands, 65kD and 27kD were observed on a SDS-PAGE gel in the purified urease sample. The urease antigen did not crossreact to rabbit antibodies prepared against Campylobacter coli and Campylobacter jejuni. Out of 93 gastric biopsy patients, sixty nine patients (74.2%) were positive in HP culture test. Serum HP antibody titers (AU: arbitrary unit) of HP culture positive and negative patients were 42.9 +/- 47.4 and 16.7 +/- 25.7 (mean +/- SD), respectively (p < 0.05). The ELISA system have sensitivity of 72.5% and specificity of 70.8%. We believe that the ELISA system is useful for diagnosis and monitoring of HP infection.

Adolescent↗

[Urease test].

In order to elucidate bacterial infection, as a rule, isolated and cultured bacteria of a specimen are identified by their morphologies or biochemical characteristics. However, the culture of Helicobacter pylori (H. pylori) is difficult and takes, much time. Therefore, favorable test results are currently obtained by combining the culture method, histopathologic method, urease test and sero-immunologic test. The merits of the urease test are that judgement is available immediately after endoscopy and that the test is inexpensive. The demerits are that the existence of H. pylori is diagnosed only by estimation that endoscopy is indispensable for the test. When compared with the culture method, the urease test has 91.8% sensitivity and 94.7% specificity and when compared with the histopathologic method, it has 94.4% sensitivity 88.4% specificity. In the future, the clinical requirement will increase for quick investigation on the evidence of H. pylori-induced infection. These results show that urease test is useful because it is simple and allows quick judgement.

Ammonia↗

Inhibition of Helicobacter pylori urease activity by ebrotidine.

Helicobacter pylori is considered a primary factor in the pathogenesis of gastric disease, and the successful mucosal colonization is linked to its urease activity. In this study, we assessed the effect of antiulcer agent, ebrotidine, on the in vitro activity of H. pylori urease. The results of assays showed a dose-dependent inhibition of the urease activity. A maximum inhibition (77%) in H. pylori urease activity occurred at 2.1 microM ebrotidine. A known H2-blocker, ranitidine, in a parallel experiment gave a maximal inhibition of 73% at a considerably higher concentration (6.4 microM). The results demonstrate that ebrotidine with its combined acid suppressant and anti-H. pylori activities offers an excellent choice in the treatment of H. pylori associated gastric disease.

Anti-Ulcer Agents↗

[Possiblity of using immobilized urease for degradation of urea in blood plasma].

As revealed the velocities of urea decomposition in the citrate donor plasma with soluble urease and urease immobilized by addition to carboxymethyl ester of cellulose, 2-(3'-amino-4'-methoxyphenyl)-sulphonylethyl ester of cellulose, diethylaminoester of cellulose, stained with dichlortriazine stain, or graft copolymere of cellulose and polyglycidylmetacrylate were sufficiently close to one another. Preparations of immobilized urease can be repeatedly used for urea decomposition in the citrate donor blood. Periodical treatment of the mentioned preparations with cystein solution led to a lesser decrease of enzymatic activity of the immobilized urease after repeated use.

Blood Preservation↗