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PubMed2002

ATP sulfurylase from the hyperthermophilic chemolithotroph Aquifex aeolicus.

ATP sulfurylase from the hyperthermophilic chemolithotroph Aquifex aeolicus is a bacterial ortholog of the enzyme from filamentous fungi. (The subunit contains an adenosine 5'-phosphosulfate (APS) kinase-like, C-terminal domain.) The enzyme is highly heat stable with a half-life >1h at 90 degrees C. Steady-state kinetics are consistent with a random A-B, ordered P-Q mechanism where A=MgATP, B=SO4(2-), P=PP(i), and Q=APS. The kinetic constants suggest that the enzyme is optimized to act in the direction of ATP+sulfate formation. Chlorate is competitive with sulfate and with APS. In sulfur chemolithotrophs, ATP sulfurylase provides an efficient route for recycling PP(i) produced by biosynthetic reactions. However, the protein possesses low APS kinase activity. Consequently, it may also function to produce PAPS for sulfate ester formation or sulfate assimilation when hydrogen serves as the energy source and a reduced inorganic sulfur source is unavailable.

Amino Acid Sequence↗
PubMed2002

Use of a biomimetic chromatographic stationary phase for study of the interactions occurring between inorganic anions and phosphatidylcholine membranes.

A liquid chromatographic method for the study of ion-membrane interactions is reported. A phosphatidylcholine biomimetic stationary phase was established by loading dimyristoylphosphatidylcholine (DMPC) onto a reversed-phase octadecylsilica packed column. This column was then used to study the interaction of some inorganic anions with the stationary phase by UV and conductivity detection. Ten inorganic anions were selected as model ions and were analyzed with the proposed chromatographic system. Anion-DMPC interactions of differing magnitudes were observed for all of the model anions. Perchlorate-DMPC interactions were strongest, followed by thiocyanate-DMPC, iodide-DMPC, chlorate-DMPC, nitrate-DMPC, bromide-DMPC, chloride-DMPC, fluoride-DMPC, and then sulfate-DMPC. Cations in the eluent, especially H(+) ions and divalent cations such as Ca(2+), showed strong effects on anion-DMPC interactions. The chromatographic data suggest that DMPC interacts with both the anions and the cations. Anion-DMPC interactions were dependent on the surface potential of the stationary phase: at low surface potentials anion-DMPC interactions were predominantly solvation dependent in nature whereas at more positive surface potentials anion-DMPC interactions were predominantly electrostatic in nature. Cation-DMPC interactions served to raise the surface potential, causing the anion-DMPC interactions to vary from solvation dependent to electrostatic. The chromatographic data were used to provide quantitative estimates of the enthalpies of the anion-DMPC interactions.

Anions↗
PubMed2002

Determination of trace level bromate and perchlorate in drinking water by ion chromatography with an evaporative preconcentration technique.

A simple sample preconcentration technique employing microwave-based evaporation for the determination of trace level bromate and perchlorate in drinking water with ion chromatography is presented. With a hydrophilic anion-exchange column and a sodium hydroxide eluent in linear gradient, bromate and perchlorate can be determined in one injection within 35 min. Prior to ion chromatographic analysis, the drinking water sample was treated with an OnGuard-Ag cartridge to remove the superfluous chloride and concentrated 20-fold using a PTFE beaker in a domestic microwave oven for 15 min. The recoveries of the anions ranged from 94.6% for NO2- to 105.2% for F-. The detection limits for bromate, perchlorate, iodate and chlorate were 0.1, 0.2, 0.1 and 0.2 microg/l, respectively. The developed method is applicable for the quantitation of bromate and perchlorate in drinking water samples.

Bromates↗
PubMed2002

Detection of multiple anions by thin-layer chromatography.

A novel detection method for 21 different anions by thin-layer chromatography is presented. Anions on the target plate form salts with amine in a developing solvent and are visualized after staining with citric acid-acetic anhydride reagent as white spots contrasting against a pale red-pink background. This method has particularly high sensitivity for anions of chlorate, sulfate, phosphate, chromate and dichromate (0.02-0.05 microg). The method is demonstrated to efficiently detect toxic arsenite in curry sauce as an example application. The proposed method offers highly efficient indirect detection for a wide range of anions, and serves as a purification procedure for the preparation of anionic sample solutions for other analytical methods.

Anions↗
PubMed1998

Analysis of oxyhalides in water by ion chromatography-ionspray mass spectrometry.

A sensitive method for analyzing chlorite, chlorate, bromate and iodate in water by ion chromatography (IC) coupled with ionspray tandem mass spectrometry (IS-MS-MS) has been developed. Prior to analysis, samples were subjected to off-line sample clean-up with Ba, Ag and H-form resins to remove sulfate, chloride and hydrogencarbonate, respectively. Oxyhalides in the purified samples were concentrated and separated on a short, high-performance anion-exchange column. An eluent consisting of ammonium nitrate in methanol-water (9:1, v/v) was found to be suitable for separating the analytes, while providing enhanced detector sensitivity. The coupling of IC with IS-MS-MS allows for the identification of the four oxyhalides mentioned above in a single run with very high specificity and sensitivity.

Drinking↗
PubMed1998

Determination of trace level bromate in drinking water by direct injection ion chromatography.

Disinfection byproduct anions such as bromate, chlorite and chlorate pose significant health risks, even at low microgram/l levels in drinking water. A direct injection, ion chromatographic method was developed using a Dionex AS9-HC anion-exchange column with a carbonate eluent and suppressed conductivity detection for the determination of these disinfection byproduct anions, and bromide, at low microgram/l levels in drinking water. No additional sample pretreatment, other than filtration, is required. The method is linear for the oxyhalides and bromide over the typical concentration range expected for these analytes in drinking water; and quantitative recoveries were obtained for drinking water samples spiked at 10 micrograms/l. This ion chromatographic method, based on the recently developed AS9-HC column, is applicable for the quantitation of bromate in finished drinking water at the 10 micrograms/l maximum contaminant level currently being proposed by the US EPA.

Bromates↗
PubMed1999

Critical comparison of retention models for the optimisation of the separation of anions in ion chromatography. II. Suppressed anion chromatography using carbonate eluents.

Seven theoretical retention models, namely the linear solvent strength model (using the dominant equilibrium approach and competing ion effective charge approach), the dual eluent species model, the Kuwamoto model, the extended dual eluent species model, the multiple species eluent/analyte model and the empirical end-points model, were used to describe the retention behaviour of anions in suppressed ion chromatography (IC). An extensive set of experimental retention data was gathered for 24 anions (fluoride, formate, bromate, chloride, hexanesulfonate, bromide, chlorate, nitrate, iodide, thiocyanate, perchlorate, sulfite, succinate, sulfate, tartrate, selenate, oxalate, tungstate, phthalate, molybdate, chromate, thiosulfate and phosphate) on a Dionex AS4A-SC column using carbonate eluents of varying concentration and HCO3-:CO3(2-) ratios. Statistical comparison of the predicted and experimentally obtained retention factors showed that the performance of the theoretical models improved with the complexity of the model. However the empirical model (in which a linear relationship is assumed between the logarithm of retention factor and the logarithm of eluent strength, but the slope is determined empirically) gave the most consistent performance across the widest range of anions. The empirical end-points model was also shown to be the most satisfactory model due to its low knowledge requirements and easy solution. Compared with non-suppressed IC (see Part I), the retention behaviour in suppressed IC was found to be easier to model by all retention models.

Anions↗
PubMed1999

Analysis of low-molecular-mass inorganic and organic anions by ion chromatography-atmospheric pressure ionization mass spectrometry.

Different nonvolatile mobile phases have been tested for the combination of ion-exchange chromatography combined with mass spectrometric detection of anions and organic acids. Buffer systems based on carbonate, sulfate, oxalate and citrate as the eluting species have been used. Among these, citrate proved to be the most versatile eluent allowing the separation of anions with absolute detection limits between 0.4 and 0.7 ng and of organic acids with detection limits between 0.4 and 4 ng in the non-suppressed mode. In the suppressed eluent mode iodate, bromate and chlorate could be separated using sodium carbonate as the mobile phase resulting in detection limits of 50 pg. The method was applied to the analysis of water samples containing oxyhalides originating from ozonization. Additionally, organic acids were separated by chromatographic separation techniques like reversed-phase, ion-pair or ion-exclusion chromatography and the compatibility with mass spectrometry was investigated with special respect to sensitivity of this detection mode.

Anions↗
PubMed2001

Changes in macroalgal communities in the vicinity of a Mediterranean sewage outfall after the setting up of a treatment plant.

Benthic macroalgal communities of the upper rocky sublittoral were studied in 1995-1996 in the vicinity of the Marseille (Mediterranean, France) sewage outfall, 8 years after the setting up of a wastewater treatment plant and compared to a previous study carried out in 1972-1974. The number of taxa has increased, a clear stational and seasonal gradient of differentiation of the vegetation appeared, and a turf of ephemeral species is taking place of Corallina elongata at sites close to the outfall. These changes may be due to a decrease in pollutant load, the discharge of ferric chlorates used in the treatment process. However, the overall change is much less conspicuous than that described for deeper soft bottom communities, in particular the Cystoseira amantacea community is not still restored. Biological traits of this species (short distance dispersal) and the nature of most pollutants removed from the effluent (solids and organic matter) may explain this phenomenon.

Ecosystem↗
PubMed2001

The DeltauvrB mutations in the Ames strains of Salmonella span 15 to 119 genes.

The DeltauvrB mutations present in strains of Salmonella enterica Typhimurium used commonly in the Salmonella (Ames) mutagenicity assay were isolated independently for at least five different his mutants. These deletions all involved the galactose operon, biotin operon, nucleotide-excision-repair uvrB gene, and chlorate-resistance genes. Beyond this, the size of the deletions and the number and type of genes deleted have remained unknown for nearly 30 years. Here, we have used genomic hybridization to a Typhimurium microarray to characterize these five DeltauvrB deletions. The number of genes (and amount of DNA) deleted due to the DeltauvrB mutations are 15 (16kb) each in TA97 and TA104, 47 (50kb) in TA100, 87 (96kb) in TA1537, and 119 (125kb) in TA98, accounting for 0.3, 0.3, 1.0, 1.9, and 2.6% of the genome, respectively. In addition, TA97 and TA104 contain an identical three-gene deletion elsewhere in their genomes, and, most remarkably, TA104 contains a 282-gene amplification, representing 7% of the genome. Missing genes include mfdA and mdaA, encoding a multi-drug translocase and a major nitroreductase, respectively, both absent in TA98; dps, encoding a DNA-binding protein absent in TA1537 and TA98; and dinG, encoding a lexA-regulated repair enzyme, absent in three DeltauvrB lineages. Genes involved in molybdenum cofactor biosynthesis and a number of ORFs of unknown functions are missing in all DeltauvrB strains investigated. Studies in DeltauvrB strains of Escherichia coli have found that the enhanced mutagenesis of some base analogues was due to the deletion of genes involved in molybdenum cofactor biosynthesis rather than to deletion of uvrB. These discoveries do not diminish the value of the data generated in the Ames strains. However, absence of genes other than uvrB may account for the enhanced mutagenicity of some compounds in DeltauvrB Ames strains. In general, microarrays will be useful for characterizing the extent and nature of deletion and amplification mutations.

DNA Helicases↗
PubMed2003

Ozonation of drinking water: part II. Disinfection and by-product formation in presence of bromide, iodide or chlorine.

Ozone is an excellent disinfectant and can even be used to inactivate microorganisms such as protozoa which are very resistant to conventional disinfectants. Proper rate constants for the inactivation of microorganisms are only available for six species (E. coli, Bacillus subtilis spores, Rotavirus, Giardia lamblia cysts, Giardia muris cysts, Cryptosporidium parvum oocysts). The apparent activation energy for the inactivation of bacteria is in the same order as most chemical reactions (35-50 kJ mol(-1)), whereas it is much higher for the inactivation of protozoa (80 kJ mol(-1)). This requires significantly higher ozone exposures at low temperatures to get a similar inactivation for protozoa. Even for the inactivation of resistant microorganisms, OH radicals only play a minor role. Numerous organic and inorganic ozonation disinfection/oxidation by-products have been identified. The by-product of main concern is bromate, which is formed in bromide-containing waters. A low drinking water standard of 10 microg l(-1) has been set for bromate. Therefore, disinfection and oxidation processes have to be evaluated to fulfil these criteria. In certain cases, when bromide concentrations are above about 50 microg l(-1), it may be necessary to use control measures to lower bromate formation (lowering of pH, ammonia addition). Iodate is the main by-product formed during ozonation of iodide-containing waters. The reactions involved are direct ozone oxidations. Iodate is considered non-problematic because it is transformed back to iodide endogenically. Chloride cannot be oxidized during ozonation processes under drinking water conditions. Chlorate is only formed if a preoxidation by chlorine and/or chlorine dioxide has occurred.

Animals↗
PubMed2003

Formation of aldehydes upon ClO2 disinfection.

Carbonyl compounds are considered to be the most common ozonation by-products. Apart from well-known chlorites and chlorates, chlorine dioxide (ClO(2)) also generates organic by-products. The goal of this paper is an investigation into the influence of disinfection with ClO(2) on the aldehydes formation. Three types of waters were disinfected with different doses of ClO(2) at the various pH values. The results of size exclusion chromatography show that the reaction of ClO(2) with humic fraction of natural organic matter proceeds mainly on an aromatic part of the molecules. The results obtained indicate that the level of carbonyls concentration can significantly increase with the time of ClO(2) reaction with carbonyl precursors in treated water. There is no noticeable correlation between quantity of aldehydes and pH value of disinfected water. The range of "productivity" of aldehydes in water treated with chlorine dioxide is similar to the range estimated for the carbonyls formed upon ozonation.

Aldehydes↗
PubMed2003

Chemical and microbial hypotheses explaining the effect of wastewater treatment plant discharges on the nitrifying communities in freshwater sediment.

Nitrification is a microbial key step of the nitrogen cycle, which performs the oxidation of ammonium to nitrate, via nitrite. In aquatic environments, it mainly takes place in the sediment or is associated with suspended particles. Wastewater treatment plant (WTP) discharges in rivers may disrupt sediment nitrification: this impact is related to nitrogen inputs (mainly NH(4)(+) and organic nitrogen) but could also depend on the nitrifying bacteria inputs which have been proved to survive downstream WTP discharge points. The aim of the present study was to assess the effect of NH(4)(+) and nitrifying bacteria inputs on the two steps of nitrification in freshwater sediments. To avoid natural sites constraints and to control the main environmental parameters, we used microcosms to simulate a river receiving different types of WTP discharges. These microcosms were composed of five glass dual-walls reactors (6 l) containing sediment and continuously filled (controlled flow) with river water and WTP effluent. Two types of effluents were tested: a non-nitrified one (high NH(4)(+) input, very few nitrifying bacteria) and a nitrified one (low NH(4)(+) input, more nitrifying bacteria), at different effluent/freshwater ratios (0/100, 20/80, 40/60 and 80/20). Changes in the ammonium- and nitrite-oxidizing communities were assessed by the Most Probable Number method, and changes in potential ammonium-oxidizing activity and potential nitrite-oxidizing activity were determined by incubations with specific inhibitors (sodium chlorate and allylthiourea). In most of the cases the presence of effluent induced significant changes of the nitrifying bacteria densities and potential activities in the sediment. This effect indicates generally a loss of specific potential activity and in most of the time is significant for a high effluent/river water ratio (40% to 80%). In our experimental conditions and in the case of a large WTP discharge, the nitrifying potential in freshwater sediments could thus be significantly modified.

Bacteria↗
PubMed1999

Evidence that FGF receptor signaling is necessary for endoderm-regulated development of precardiac mesoderm.

Endoderm cells in the heart forming region (HFR endoderm) of stage 6 chicken embryos are required to support the proliferation and terminal differentiation of precardiac mesoderm cells in vitro. The endoderm's effect can be substituted by growth factors, including members of the fibroblast growth factor (FGF) family. However, direct implication of FGFs in this process requires evidence that inhibition of FGF signaling interferes with proliferation and/or terminal differentiation. This report examines the consequences of treating endoderm/precardiac mesoderm co-explants with agents that inactivate FGF receptors. Using sodium chlorate, which prevents FGF ligand-receptor interaction, it was observed that the percentage of S-phase precardiac mesoderm cells was markedly reduced, suggesting that cell proliferation was inhibited. To more specifically affect FGF signaling, the explants were treated with an antibody that recognizes an extracellular domain of FGF receptor-1 (FGFR-1). This treatment similarly inhibited cell proliferation. Although both agents modestly delayed cardiac myocyte differentiation as indicated by the contractile function, expression of alpha-sarcomeric actin was not affected. These findings provide additional evidence that an intact FGF signaling pathway is required during heart development.

Animals↗
PubMed1981

Chlorine, is there a better alternative?

In brief, the current status of our present knowledge regarding alternatives to free chlorine is as follows: 1. Biocidal Capabilities - Ozone is the most potent biocide of those under consideration. Chlorine dioxide is about on a par with hypochlorous acid, the most efficient form of free residual chlorine. Chlorine dioxide, in contrast to free residual chlorine, increases in efficiency as pH increases above 6. Chloramine is a much weaker biocide than hypochlorite ion, the least inefficient form of free residual chlorine. 2. Health effects - All of the potential alternatives may cause some adverse health effects. Chlorite and chlorate, two of the reaction products of chlorine dioxide, have been shown to cause a subclinical apparently compensated hemolytic anemia in rats. On the other hand, according to very preliminary studies, chlorine and all of the alternatives except chlorine dioxide have been shown to produce reaction products from substances in water that can initiate tumors in mice. Actually, all disinfectants are reactive molecules capable of altering the chemical nature of organic substances present in the water. Thus, the alternative disinfectants question relates to other aspects of water treatment particularly the use of processes for organic precursor removal prior to disinfection. 3. Technology and Economics - The simplest and most economical conversion for many utilities, would be to the use of chloramines and the most difficult and expensive would be to the use of ozone. Conversion to chlorine dioxide would be intermediate in cost.

Chlorine↗
PubMed2001

The surface antigen SAG3 mediates the attachment of Toxoplasma gondii to cell-surface proteoglycans.

The attachment of Toxoplasma gondii to target cells is mediated by recognition of cellular heparan sulfate proteoglycans (HSPGs). The present study was performed to determine whether SAG1 and SAG3, two of the parasite surface antigens anchored to the membrane via glycosylphosphatidylinositol groups (GPIs), are involved in the tachyzoite binding to proteoglycans. The use of recombinant soluble forms of these proteins allowed us to demonstrate that SAG3, but not SAG1, interacts specifically with cellular HSPGs. Indeed, soluble recombinant SAG3 protein (recSAG3) was found to bind to immobilized heparin, whereas recSAG1 did not interact with this glycoaminoglycan. The specific adherence of recSAG3 to CHO cells was inhibited by soluble glycoconjugates, of which heparin, fucoidan and dextran sulfate were the most effective. Moreover, binding of recSAG3 to two HSPGs-deficient cell mutants was reduced by up to 80%. Proteoglycan sulfation was critical for SAG3 adherence to HSPGs as incubation of cells in the presence of sodium chlorate drastically reduced the recSAG3 binding. Finally, preincubation of CHO cells with recSAG3 blocked the adsorption of radiolabelled Toxoplasma tachyzoites. Taken together, these results indicate that SAG3 is a first glycoaminoglycan-binding protein associated with Toxoplasma, and SAG3-HSPGs interactions are involved in the parasite attachment to target cells.

Animals↗
PubMed1997

Detection of pathogenic Yersinia enterocolitica in milk and pork using a DIG-labelled probe targeted against the yst gene.

A PCR-amplified, digoxigenin (DIG)-labelled yst probe was evaluated in naturally and artificially contaminated pork and milk samples for its ability to detect and differentiate between pathogenic and nonpathogenic strains of Yersinia enterocolitica following enrichment in irgasan-ticarcillin-chlorate (ITC) enrichment broth. A total of 44 raw pork samples were obtained from one meat-processing factory and two local retail stores. Y. enterocolitica serogroup O:3/biovar 4 was isolated from 6 of the 44 (14%) pork samples tested. The hybridization results were in good agreement when compared with those from standard biochemical and serological tests. The lowest concentration detectable by a colony hybridization technique in the milk samples inoculated with Y. enterocolitica O:8 PA-A corresponded to 10 cfu/ml in the original sample. No pathogenic serovars were detected in 6 raw milk and 3 pasteurized milks tested. The results of this investigation demonstrate that the DIG-labelled yst probe is a reliable tool for rapid detection of pathogenic Y. enterocolitica in naturally and artificially contaminated food samples.

Animals↗
PubMed1999

Construction and characterization of an equine herpesvirus 1 glycoprotein C negative mutant.

An equine herpesvirus 1 (EHV-1) strain RacL 11 mutant was constructed that carries the Escherichia coli LacZ gene instead of the open reading frame encoding glycoprotein C (gC). The engineered virus mutant (L11(delta)gC) lacked codons 46-440 of the 1404 bp gene. On rabbit kidney cell line Rk13 and equine dermal cell line Edmin337, the L11(delta)gC virus grew to titers which were reduced by approximately 5- to 10-fold compared with wild-type RacL11 virus or a repaired virus (R-L11(delta)gC). However, when L11(delta)gC growth properties were analyzed on primary equine cells a decrease of viral titers was observed such that extracellular L11(delta)gC titers were reduced by 48- to 210-fold compared with those of wild-type or repaired virus. Heparin sensitive and heparin resistant attachment was assessed by binding studies using radiolabeled virion preparations. These studies revealed that EHV-1 gC is important for heparin sensitive attachment to the target cell. Similar results were obtained when cellular glycosaminoglycan (GAG) synthesis was inhibited by chlorate treatment or when cells defective in GAG synthesis were used. L11(delta)gC also exhibited significantly delayed penetration kinetics on Rk13 and primary equine cells. Infection of mice with L11(delta)gC did not cause EHV-1-related disease, whereas mice infected with either RacL11 or R-L11(delta)gC exhibited massive bodyweight losses, high virus titers in the lungs, and viremia. Taken together, EHV-1 gC was shown to play important roles in the early steps of infection and in release of virions, especially in primary equine cells, and contributes to EHV-1 virulence.

Animals↗