Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “Terminology as Topic”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 595 records · Page 33Linked to original sources

Terminological reference of a knowledge-based system: the data dictionary.

The development of open and integrated knowledge bases makes new demands on the definition of the used terminology. The definition should be realized in a data dictionary separated from the knowledge base. Within the works done at a reference model of medical knowledge, a data dictionary has been developed and used in different applications: a term definition shell, a documentation tool and a knowledge base. The data dictionary includes that part of terminology, which is largely independent of a certain knowledge model. For that reason, the data dictionary can be used as a basis for integrating knowledge bases into information systems, for knowledge sharing and reuse and for modular development of knowledge-based systems.

Artificial Intelligence↗

[Correct use of anatomic nomenclature in selected Czech professional journals].

The objective was to assess in a qualitative study how correctly anatomical terms are used in four selected Czech medical journals (Acta Chirurgiae Orthopaedicae and Traumatologicae Cechoslovaca, Ceská gynecology, Ceská radiology and Rozhledy v chirurgii, 1990-1996). A total of 1200 articles were evaluated where 145 anatomical terms were detected which differed from P.N.A. and from Nomina Anatomica valid at present. Of these 25 were terms from B.N.A. (4) and from I.N.A. (21). Approximately twice as frequent were anatomical and clinical eponyms (52). The highest ratio (71) was formed by incorrect terms (36 Latin and 35 Czech). The authors feel that in the improvement of the standard of exact anatomical terminology in clinical medicine as well as in the professional literature in future a part should be played by better teaching at medical faculties within the framework of the new curriculum and by higher demands on the standard of manuscripts accepted by editors of professional journals.

Anatomy↗

Text mining and ontologies in biomedicine: making sense of raw text.

The volume of biomedical literature is increasing at such a rate that it is becoming difficult to locate, retrieve and manage the reported information without text mining, which aims to automatically distill information, extract facts, discover implicit links and generate hypotheses relevant to user needs. Ontologies, as conceptual models, provide the necessary framework for semantic representation of textual information. The principal link between text and an ontology is terminology, which maps terms to domain-specific concepts. This paper summarises different approaches in which ontologies have been used for text-mining applications in biomedicine.

Abstracting and Indexing↗

Biomedical signal processing (in four parts). Part 1. Time-domain methods.

This is the first of a series of four tutorial papers on biomedical signal processing. It provides an introduction to terminology and basic ideas for testing for randomness and trend, and for the determination of basic signal properties in the time domain, given the uncertainties associated with the estimation process. Techniques outlined in the paper are: the coherent average, cross-correlation and covariance, autocorrelation and phase-shift averaging.

Biomedical Engineering↗

"Meta-analysis: statistical alchemy for the 21st century": discussion. A plea for a more balanced view of meta-analysis and systematic overviews of the effect of health care interventions.

The paper discusses some of the most common criticisms to meta-analysis presented by Professor Feinstein in this Conference. As many of the points raised in his contributions are not new, a critique to them is presented in the context of the type of contribution given by systematic reviews (meta-analysis) to the analysis of the effects of health care interventions. After discussing some terminological issues, the paper challenges Feinsteins' arguments indicating that meta-analysis is inherently faulted on four grounds: (a) reproducibility, (b) precision, (c) suitable extrapolation, (d) fair comparison. Each point is discussed providing examples drawn from the published literature with a view to indicate that--despite their current limitations--systematic reviews are a necessary step to synthesize information, orient clinical research and help produce practice guidelines.

Bias↗

Statistics in orthopaedic papers.

Although the importance of sound statistical principles in the design and analysis of data has gained prominence in recent years, biostatistics, the application of statistics to the analysis of biological and medical data, is still a subject which is poorly understood and often mishandled. This review introduces, in the context of orthopaedic research, the terminology and the principles involved in simple data analysis, and outlines areas of medical statistics that have gained prominence in recent years. It also lists and provides an insight into some of the more common errors that occur in published orthopaedic journals and which are frequently encountered at the review stage in papers submitted to the Journal of Bone and Joint Surgery.

Biometry↗

If ontology is the solution, what is the problem?

In this paper we show the usefulness of an ontological approach for solving some problems arising in medicine. We point out the relevance of terminological ontologies for disambiguating polysemous terms, for re-organizing very large corpora and detecting possible inconsistencies and for managing a catalog of bio-medical equipments. We also put in evidence the fundamental role played by ontologies when integration and interoperability of heterogeneous knowledge sources is needed, in particular in the field of clinical guidelines and evidence-based medicine.

Biomedical Engineering↗

Historical terminology of eating disorders.

Using a wide range of rare, early printed sources, including literary material, some of the first English language dictionaries, medical lexicons and medical texts, the historical origins, development and application of five terms relating to eating abnormalities are investigated. It is demonstrated that four of these, which are in current psychiatric usage, exhibited notable consistency of meaning and application over many centuries.

Feeding and Eating Disorders↗

The professional standard of care in clinical negligence.

Clinical guidelines are important healthcare quality management tools which have become more widely known and accepted in the NHS today. There are some problems with the terminology used regarding clinical guidelines and sometimes they are confused with protocols. Clinical guidelines have a number of legal implications and they could be influential in determining the standard of care to be expected in a particular case. The Bolam case shows that a number of care approaches are acceptable as long as they are reasonable. The developers of clinical guidelines should develop an audit trail of their work and build in review dates.

Guideline Adherence↗

Bioinformatics in proteomics: application, terminology, and pitfalls.

Bioinformatics applies data mining, i.e., modern computer-based statistics, to biomedical data. It leverages on machine learning approaches, such as artificial neural networks, decision trees and clustering algorithms, and is ideally suited for handling huge data amounts. In this article, we review the analysis of mass spectrometry data in proteomics, starting with common pre-processing steps and using single decision trees and decision tree ensembles for classification. Special emphasis is put on the pitfall of overfitting, i.e., of generating too complex single decision trees. Finally, we discuss the pros and cons of the two different decision tree usages.

Computational Biology↗

Common methodological terms in health services research and their synonyms [correction of symptoms].

OBJECTIVE: Health services researchers use methods and terminology from a variety of disciplines to understand individual and organizational behavior related to health, health care, and health insurance. Although this diversity benefits the process of research, the resulting differences in terminology can occasionally lead to confusion among even the most experienced researchers. The purpose of this paper is to clarify different methodological terms used to represent common study designs and statistical concepts in health services research. METHOD: Faculty from the departments of Health Services, Biostatistics and Epidemiology at the University of Washington were asked to provide a list of terms commonly used in health services research that had one or more methodological terms with the same or similar meaning. Consistent with the Delphi method, the initial list was then circulated to internal and external methodologists and additional terms were added for completeness. Terms related to study designs, equation specification, and estimation problems with synonymous terminology were included. RESULTS: A "methodological thesaurus" is developed and described in this paper. Many terms were found which described essentially identical concepts. In other cases, terms had slight but important differences in meaning across disciplines, leading to potential confusion in their use. CONCLUSION: In light of these differences in terminology, it is not surprising that health services researchers with a particular disciplinary orientation currently find literature within their own discipline entirely readable and literature from another discipline considerably less accessible. The "methodological thesaurus" presented in this paper should be of value to health services researchers who are interested in exploring the full array of methods developed to address a particular problem. Teachers and students of health services research should also find this article of use in relating similar concepts across disciplines in quantitative health services research publications.

Bias↗

Clinicopathological staging for colorectal cancer: an International Documentation System (IDS) and an International Comprehensive Anatomical Terminology (ICAT).

The purpose of tumour staging for colorectal cancer (CRC) is to help define clinical management, facilitate communication between physicians, provide a basis for stratification and analysis of treatment results in prospective studies, and provide some prognostic information for patients and their families. The World Congresses of Gastroenterology, Digestive Endoscopy, and Coloproctology, Working Party on staging for CRC studied six commonly used systems to review their strengths and weaknesses. Although it was concluded that defining a new staging system was unnecessary, it was recognized that there is a need to define a terminology to describe the full anatomic extent of spread of CRC. Furthermore, we note that there are several additional features, derived from both clinical and pathology information, which have had prognostic significance shown by appropriately constructed multivariate analyses and which can be used to formulate a more accurate prognostic index than that provided by a description of anatomical tumour spread. Thus the Working Party came to two principal conclusions. First, a standard format should be adopted for the collection of the essential data required for prospective studies, and we recommend the 'International Documentation System (IDS) for CRC' for this purpose. Second, a nomenclature which describes the full anatomical extent of tumour spread and residual tumour status in CRC has been defined and should be adopted, from which all currently used staging systems can be derived. We have called this nomenclature the 'International Comprehensive Anatomical Terminology (ICAT) for CRC'. In the event that these recommendations are adopted, we envision that there will be improved clarity in the documentation of treatment outcome for patients with CRC and improved communication of results derived from prospective studies. Furthermore, an acceptance of IDS and ICAT would set the scene to develop a prognostic index for individual patients with CRC by the expansion of anatomical clinicopathology staging information to include additional factors which have independent prognostic significance.

Colorectal Neoplasms↗

Context-based task ontologies for clinical guidelines.

Evidence-based medicine relies on the execution of clinical practice guidelines and protocols. A great deal of effort has been invested in the development of tools which can automate the representation and execution of the recommendations contained within such guidelines, by creating Computer Interpretable Guideline Models (CIGMs). Context-based task ontologies (CTOs), based on standard terminology systems like UMLS, form one of the core components of such models. We have created DAML+OIL-based CTOs for the tasks referred to in the WHO guideline for hypertension management, drawing comparisons also with other, related guidelines. The advantages of CTOs include: contextualization of ontologies, tailoring of ontologies to specific aspects of the phenomena of interest, division of the complex tasks involved in creating ontologies into different levels, and provision of a methodology by means of which the task recommendations contained within guidelines can be integrated into the clinical practices of a health care set-up.

Humans↗

Emergency medicine terminology in the United Kingdom--time to follow the trend?

OBJECTIVE: To determine the frequency of use of the terms "accident and emergency" and "emergency medicine" and their derivatives in original articles in the Journal of Accident and Emergency Medicine. METHODS: Hand search of all articles in the Journal of Accident and Emergency Medicine from September 1995 to July 2000, categorising the first use of terminology in each original article to describe the specialty, its departments, or their staff into either accident and emergency or emergency medicine groups. RESULTS: There is a clear trend towards increasing use of the terms emergency medicine, emergency physician and emergency department, with decreasing use of the terms accident and emergency medicine, accident and emergency department and accident and emergency doctor, although the latter group still constitutes the majority. CONCLUSION: The use of emergency medicine to describe the specialty in the United Kingdom is increasing, although this may reflect the Journal's growing international standing. This trend should be taken into account in the debate over the specialty's name in this country.

Accidents↗

Identification of meta-analyses. The need for standard terminology.

Our efforts to identify published articles describing meta-analyses of clinical trials illustrate the need for standard terminology to facilitate retrieval. We found 119 articles describing meta-analyses and eligible for inclusion in MEDLINE, and yet when we searched MEDLINE, using strategies based on textwords and medical subject headings (MeSH), only 48% of the 119 articles were identified. Sixty-eight (57%) of the 119 articles contained at least one of the terms "meta-analysis," "pooling," or "overview" in the title or abstract. The importance of meta-analyses in the evaluation of medical treatments argues for more disciplined use of a specific term in order to facilitate identification of articles. The fact that the National Library of Medicine has started in 1989 to index articles describing meta-analyses using the MeSH META-ANALYSIS underscores this argument.

Clinical Trials as Topic↗

The definition of adequate care in externally sponsored clinical trials: the terminological controversy about the concept "standard of care".

The treatment of the control group in externally sponsored clinical trials is the issue of one of the most heated debates in international research ethics. The paradigmatic cases are the mother-to-child HIV-transmission trials that took place in 16 developing countries in 1997, where the control group received a placebo while proven treatment was available in industrialized countries. From this circumstance results the controversy as to whether the sponsor and researchers of externally sponsored trials have to supply a treatment that is usually not available in the host country. From the beginning of the debate the controversial level of treatment has been called "standard of care". However, besides the disagreement about the quality of the care that has to be supplied, there is as yet no widely accepted clear meaning of this concept. This article examines the fundamental ambiguity of the term and its formal function as an ethical criterion including suggestions on its further use.

Beneficence↗

Emerging role of epidemiologic literacy.

BACKGROUND: The ability to understand and apply epidemiology methods is a growing part of pharmacy practice, pharmacy accreditation standards, and evidence-based practice. OBJECTIVE: To examine the trends in epidemiology-related terminology used in the literature over the past 20 years. METHODS: The frequency of the use of epidemiology-related terminology in 3 representative pharmacy journals, 2 representative medical journals, and 1 public health journal from January through December 1984, 1994, and 2004 was recorded. The 3 pharmacy journals were the American Journal of Health-System Pharmacy (formerly American Journal of Hospital Pharmacy), The Annals of Pharmacotherapy (formerly Drug Intelligence and Clinical Pharmacy), and Pharmacotherapy. The 2 medical journals were the New England Journal of Medicine and The Journal of the American Medical Association (JAMA), and the public health journal was the American Journal of Public Health. The number of times an epidemiology-related term was used was summed for each year and each journal. RESULTS: For all the journals examined in this study combined, the proportion of epidemiologic terms used in the literature has increased over the past 20 years. In 1984, of the total articles published in the 6 journals, 7.02% contained epidemiologic terms increasing to 12.27% and 15.46% in 1994 and 2004, respectively. The most dramatic differences in the 20-year comparisons were noted for Pharmacotherapy (0 to 17.75%) and JAMA (7.32 to 26.72%). CONCLUSIONS: The increase in the use of epidemiology-related terms has implications for both curricular planning in schools and colleges of pharmacy, as well as for continuing education programs and effective interprofessional communication.

Epidemiology↗

Fitness for work: the SIMLII Health Surveillance Guidelines.

Italian legislation on prevention in occupational hygiene and safety, which is based largely on European Union Directives, requires health surveillance when risk assessment has identified a risk for workers' health. Health surveillance must be carried out by the occupational physician and concludes with the issue of a fitness for work certificate for the specific job. The guidelines produced by the "Italian Society of Occupational Medicine and Industrial Hygiene" (SIMLII), through the "Consortium for Accreditation and Updating in Occupational Medicine" founded by the "S. Maugeri Foundation of Pavia", Italy, focus firstly on the definition of judgment of fitness for a specific job. They outline the theoretical basis of the medico-legal terminology for fitness for work, which is founded on the concepts of suitability, fitness, capacity, ability, representing successive degrees of qualification and specific potential that the worker may attain during accomplishment of the tasks involved in the job. To assess fitness for a specific job, the occupational physician must consider whether the worker possesses the psycho-physical requisites normally needed to do the job, not the top levels of such requisites. The intrinsic characteristics of any judgment of fitness for work, namely its individual, probabilistic and time-dependent nature, are illustrated. The operative methodological model for making a judgment must include: assessment of the job and work environment, assessment of the worker through health surveillance, comparison and correlation of the two terms of the equation: human subject-work environment, the judgment thus made and the choice of any necessary measures and/or intervention. The methods for conducting the assessment process culminating in a judgement are presented, as stipulated in the pertinent legislation, and include the following conclusions: fitness, partial or total unfitness, temporary unfitness, fitness provided suitable prescriptions are observed,fitness provided some conditions are met. These definitions are analyzed in greater depth, especially the possible confusion between partial unfitness and fitness provided suitable prescriptions are observed. The employer or worker may lodge an appeal with the local health service inspection service against certain judgments of unfitness for work. Finally, as health surveillance is governed by different legal norms, the contents of which appear to be to some extent contradictory, even though aimed at safeguarding the dignity and freedom of the worker, the reasons why the occupational physician should take into account diseases apart from those of the organs exposed to specific risk are discussed. These should be borne in mind when issuing the specific fitness for work certificate at the end of preventive and periodical medical examinations.

Humans↗