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PubMed2003

Some entomological observations on temporal and spatial distribution of malaria vectors in three villages in northwestern Thailand using a geographic information system.

This spatial and temporal heterogeneity in the distribution of Anopheles mosquitos were studied during August 2001 to December 2002 in three villages Ban Khun Huay, Ban Pa Dae, and Ban Tham Seau, in northwestern Thailand in Mae Sot district, Tak Province. The three Karen villages are located about 20 km east of the city of Mae Sot near the Myanmar border. Twenty-one species were collected on human collections during 68 nights of 17 months. Anopheles minimus comprised of 86% of the specimens biting man. An. minimus was implicated as a vector based on the detection of sporozoite infections using enzyme-linked immunosorbent assays for Plasmodium falciparum and P. vivax. Seasonal comparison of vectorial capacity and entomological inoculation rate was calculated. An. dirus was rarely encountered and probably played little part in transmission in these three villages during the period of study. Information is provided on nightly biting activity, parity rate, infectivity, and adult and larval bionomics. Spatial and temporal comparisons among the collections were displayed on different satellite images including the Normalized Difference Vegetation Index data from on the National Oceanographic and Atmospheric Administration satellites (NOAA/NDVI), the LANDSAT satellite Thematic Mapper (spatial resolution 30x30 m) and the IKONOS satellite (spatial resolution 1x1 m) in a Geographical Information System (GIS).

Animals↗
PubMedDate not supplied

Trends in the temporal and spatial distribution of visceral and cutaneous leishmaniasis in the state of Bahia, Brazil, from 1985 to 1999.

Temporal and spatial trends in the geographical distribution of 12,413 cases of American visceral leishmaniasis (AVL) and of 48,138 cases of American cutaneous leishmaniasis (ACL) notified from 1985 to 1999 in the State of Bahia, Brazil, were analysed. The emergence of new endemic municipalities indicated an increasing trend for AVL and ACL. In the years 1985, 1990 and 1996, AVL was endemic in 7% (n = 31), 18% (n = 73) and 30% (n = 123), and ACL was endemic in 13% (n = 54), 27% (n = 112) and 34% (n = 140), of 415 municipalities. New trends were identified, and the relation with the ecoepidemiology of both diseases is discussed.

Brazil↗
PubMed2001

Spatial distribution of Eucalyptus roots in a deep sandy soil in the Congo: relationships with the ability of the stand to take up water and nutrients.

Spatial statistical analyses were performed to describe root distribution and changes in soil strength in a mature clonal plantation of Eucalyptus spp. in the Congo. The objective was to analyze spatial variability in root distribution. Relationships between root distribution, soil strength and the water and nutrient uptake by the stand were also investigated. We studied three, 2.35-m-wide, vertical soil profiles perpendicular to the planting row and at various distances from a representative tree. The soil profiles were divided into 25-cm2 grid cells and the number of roots in each of three diameter classes counted in each grid cell. Two profiles were 2-m deep and the third profile was 5-m deep. There was both vertical and horizontal anisotropy in the distribution of fine roots in the three profiles, with root density decreasing sharply with depth and increasing with distance from the stump. Roots were present in areas with high soil strength values (> 6,000 kPa). There was a close relationship between soil water content and soil strength in this sandy soil. Soil strength increased during the dry season mainly because of water uptake by fine roots. There were large areas with low root density, even in the topsoil. Below a depth of 3 m, fine roots were spatially concentrated and most of the soil volume was not explored by roots. This suggests the presence of drainage channels, resulting from the severe hydrophobicity of the upper soil.

Calcium↗
PubMed1992

[Land planning in Zaire through the spatial distribution of the population].

"Land planning in Zaire is examined through the analysis of population distribution by density and potential. The difference between these two techniques is that the calculation of population potential takes into account a genuinely geographical element, which is the distance between one given place and the other places within the area under consideration.... Taking potential as a criterion leads to developing an axis of communication from one end of the country to the other through densely populated, high-potential areas. Population density leads to a limited axis in each of the two regions with a high density of human occupation. In conclusion, the contribution of distance in land planning is to facilitate access for larger numbers of people and increase potential exchanges and contacts with other territories." (SUMMARY IN ENG)

Africa↗
PubMed1975

An analysis of the spatial distribution of ciliary units in a ciliate, Euplotes minuta.

Six to eleven longitudinal ciliary rows are arrayed over the dorsal surface of the ciliate Euplotes minuta. Forty-two to 129 ciliary units are distributed among these rows. The number of rows depends on genotype, clonal age, and vegetative ancestry, while the total number of units is controlled partly by the number of rows and also by the separate action of genetic and environmental factors. 2. The pattern of distribution of units among different rows of non-dividing cells can be analysed on the basis of the percentage of the total unit complement of the cell that is found in each individual row. If the assumption is made that ciliary rows are uniformly spaced over a dorsal field whose width is independent of the number of rows, then it can be shown that units are distributed among rows according to a relatively invariant spatial pattern. The form of this pattern remains the same in the face of variation in the absolute number of rows and of units. 3. Prior to cell division new units develop anterior and posterior to old units situated within the equatorial zone of each row. About one-half of the original units are included within this zone. The cell fission line develops within this zone such that the total number of units passed to the anterior and posterior division products are about equal. 4. The pattern according to which units of different zones (proliferating and non-proliferating) are distributed among different rows has been mapped in cells that have completed the process of proliferation of units but have not yet completed cell division. The results of this mapping show that the pattern of distribution of units in the equatorial zone at the conclusion of proliferation is not the same as the overall pattern in non-dividing cells. Further analysis indicates that the geometry of proliferation can be most simply represented as a result of two superimposed processes, one of which is the recruitment of old units into the zone of proliferation, while the other is the intensity of proliferation, i.e. the number of new units formed adjacent to each old unit. Both recruitment and intensity have constant values in the central region of the dorsal field, while recruitment is higher and intensity lower near both margins. The recruitment and intensity distributions are mutually nearly reciprocal, with slight asymmetries that formally account for the more dramatic asymmetry of the pattern of non-dividing cells. 5. A dualistic hypothesis is formulated for the control of the formation of new ciliary units within ciliary rows. The position of each new unit is largely controlled locally in relation to pre-existing units, while the decision of whether or not new units will develop at all, and how many will be formed, depends on superimposed positional systems operating within the context of the entire dorsal surface.

Cell Division↗
PubMed2004

Temporal and spatial distribution of pectin epitopes in differentiating anthers and microspores of fertile and sterile sugar beet.

We studied the possible involvement of several pectin epitopes in anther differentiation and microsporogenesis in fertile and cytoplasmically male sterile sugar beets. The spatial and temporal distribution of five structural motifs were traced with a panel of monoclonal antibodies in six stages: premeiosis, meiotic prophase, young and mature tetrads, young and expanding microspores. The composition of the walls of sporogenous cells and meiocytes differed than that in the tapetum, as evidenced by the presence of alpha-Fuc(1-->2)-beta-Gal and alpha-(1-->5)-L-Ara epitopes binding CCRC-M1 and LM6 antibodies. At meiotic prophase, the meiocyte walls were additionally marked by the appearance of poorly methyl-esterified domains of homogalacturonan and of (1-->4)-beta-Gal residues, detected by JIM5 and LM5. Some constituents of the meiocyte wall which reacted with JIM5 and JIM7 persisted on the surface of the special callose sheath during tetrad development. In newly formed primexine and exine layers of tetrads and microspores, epitopes that were bound by JIM5, JIM7 and LM5 were abundant. No differences in the deposition or relative abundance of pectins were found between fertile and sterile anthers until microspore release from the callose. Later, at the time of abortion, sterile microspores had much larger amounts of epitopes detected by JIM5 than their fertile counterparts.

Antibodies, Monoclonal↗
PubMed2001

Spatial distribution of vital and dead microorganisms in dental biofilms.

To examine the spatial structure of dental biofilms a vital fluorescence technique was combined with optical analysis of sections in a confocal laser scanning microscope (CLSM). Enamel slaps were worn in intraoral splints by three volunteers for five days to accumulate smooth-surface plaque. After vital staining with fluorescein diacetate and ethidium bromide the specimens were processed for CLSM examination. Optical sections 1 microm apart were analysed in the z-axis of these dental biofilms. One of the films was 15 microm high, sparse and showed low vitality, i.e. <16%, while the others were taller (25 and 31 microm) and more vital, i.e. up to 30 and 69%, respectively. In all instances the bacterial vitality increased from the enamel surface to the central part of the plaque and decreased again in the outer parts of the biofilm. The spatial arrangement of the microorganisms in the biofilm showed voids outlined by layers of vital bacteria, which themselves were packed in layers of dead material.

Biofilms↗
PubMed2005

Polycyclic aromatic hydrocarbons in bivalves from the San Francisco estuary: Spatial distributions, temporal trends, and sources (1993-2001).

Bivalve tissue samples were examined over a range of spatial and temporal scales (1993-2001) to determine PAH distributions, trends, and possible sources. Mussels (Mytilus californianus), oysters (Crassostrea gigas), and clams (Corbicula fluminea) were deployed for three months in the estuary at stations remote from known point source discharges. The range of summation operatorPAH detected in bivalves was oysters 184-6899 microg/kg dry wt (mean 678 microg/kg dry wt), mussels 21-1093 microg/kg dry wt (mean 175 microg/kg dry wt), and clams 78-720 microg/kg dry wt (mean 323 microg/kg dry wt). Linear regression analysis showed no statistically significant (p>0.05) temporal trends in clam and mussel summation operatorPAH at any of the deployment stations or estuary segments. On the other hand, a statistically significant (p<0.05) decreasing trend was found in summation operatorPAH in oysters at the Petaluma River station, and in the North Estuary segment. PAH isomer pair ratios applied as diagnostic indicators suggested that the bioaccumulated PAH were derived primarily from petroleum combustion, with lesser amounts derived from biomass and coal combustion, and unburned petroleum.

Animals↗
PubMed2004

Polycyclic aromatic hydrocarbons in the San Francisco Estuary water column: sources, spatial distributions, and temporal trends (1993-2001).

The composition of PAH in surface waters was examined over a range of spatial and temporal scales to determine distributions, trends, and possible sources. Water samples were collected from 1993 to 2001. PAH in organic extracts were analyzed by gas chromatography-mass spectrometry (GC-MS) and 25 individual target PAH summed to get the total PAH concentration in each water sample. The distribution of median total PAH concentration by estuary segments was Extreme South Bay (120 ng l(-1)) > South Bay (49 ng l(-1)) > North Estuary (29 ng l(-1)) > Central Bay (12 ng l(-1)) > Delta (7 ng l(-1)). Overall, total PAH concentrations were significantly higher in the Extreme South Bay compared to all other segments, and the Central Bay and Delta were significantly lower than all other segments (Kruskal-Wallis, H = 157.27, df = 4, p < 0.0005). This distribution reflects the large urbanized and industrialized areas that border the southern portions of the estuary and the less populated and rural areas that surround the Delta. Temporal trend analysis showed a statistically significant temporal trend in total PAH concentration at only one of the 18 sampling stations situated throughout the estuary (San Jose, significant decrease, p = 0.031, r(2) = 0.386, n = 12). PAH isomer pair ratio analysis showed that PAH in estuary waters were derived primarily from combustion of fossil fuels/petroleum (possible PAH source contributors include coal, gasoline, kerosene, diesel, No. 2 fuel oil, and crude oil) and biomass (possible contributors include wood and grasses), with lesser amounts of PAH contributed from direct petroleum input.

California↗
PubMed2000

Determination of the spatial distribution of major elements in the rat brain with X-ray fluorescence analysis.

An energy dispersive X-ray fluorescence analysis was applied for determining the spatial (two-dimensional) distribution of elemental concentrations in rat brain sections. Freeze-dried brain sections prepared from normal and ischemic rats with middle cerebral artery occlusion were scanned with a collimated X-ray beam (0.18 mm in diameter, 50-kV acceleration voltage). The fluorescent Kalpha X-rays of P, S, Cl, and K were detectable, so that the two-dimensional distribution of fluorescent X-ray intensities could be determined for these elements. Furthermore, quantitative determination was possible for P and K by using the fundamental parameter technique. However, the accurate determination of Na and Ca was difficult, because of the low energy of Kalpha X-ray of Na, and the interference of K-Kbeta with Ca-Kalpha. The change in elemental concentrations in ischemic tissue, including the decrease in K concentration and increase in Cl concentration, was demonstrated by this method as a two-dimensional contour map. Since it is possible to obtain a pictorial representation of the elemental concentration in tissue sections, this method may be useful to evaluate the ionic changes in injured brain tissue in relation to histological or autoradiographical observations.

Animals↗
PubMed1995

Temporal and spatial distributions of yeast nucleoside diphosphate kinase activities and its association with the Cdc8p.

Nucleoside diphosphate kinase (E.C. 2.7.4.6.) is a broad substrate-specific enzyme that catalyzes the phosphorylation of nucleoside diphosphates to the corresponding triphosphates in nucleic acid biosynthesis. In this report, we investigate its spatial and temporal distributions in yeast to understand how the enzyme exerts its gene function(s). Our results show that the enzyme is predominantly cytoplasmic. A substantial amount of enzyme activity (40-50%) may be associated with the cell membrane. Less than 1% of total activity was detected in the nuclear fraction. Approximately 3% was found in the mitochondrial fraction. When yeast cultures were synchronized, we found that Saccharomyces cerevisiae nucleoside diphosphate kinase did not show cell cycle periodicity, as Schizosaccharomyces pombe enzyme did. To explore its link with DNA synthesis, we investigated its relationship with the Cdc8p (dTMP kinase). We demonstrated a physical interaction between these proteins in vitro, as evidenced that the GST:Cdc8p protein affinity column could retain a subpopulation of nucleoside diphosphate kinase activity from yeast crude extract. Furthermore, when GST:Cdc8p protein was expressed in yeast, the protein could bind to the glutathione-agarose, along with nucleoside diphosphate kinase, suggesting that there is an interaction between GST:Cdc8p and nucleoside diphosphate kinase in vivo. Our results provide evidence for at least a two-enzyme complex that may well facilitate nucleotide channeling in the cell.

Cell Cycle↗
PubMed1985

Gene density over the chromosome of Escherichia coli: frequency distribution, spatial clustering, and symmetry.

Published studies of gene density (the number of genetic loci per unit of length on the linkage map) for Escherichia coli report a nonrandom frequency distribution and indicate notable symmetry in spatial clustering of gene density. We reexamined these results and found that gene density is a random variable with a frequency distribution that is lognormal. That is, the logarithm of gene density is a normally distributed random variable. Furthermore, comparison of the observed E. coli map and computer-generated random maps showed that symmetries in the spatial clustering of gene density are not exceptional; these features arise naturally among genes (or loci) whose density has this frequency distribution. These results are discussed along with other related examples that illustrate the emerging importance of statistical inference in molecular genetics.

Bacterial Proteins↗
PubMed1999

Spatial distribution and habitat characterization of anopheline mosquito larvae in Western Kenya.

Studies were conducted to characterize larval habitats of anopheline mosquitoes and to analyze spatial heterogeneity of mosquito species in the Suba District of western Kenya. A total of 128 aquatic habitats containing mosquito larvae were sampled, and 2,209 anopheline and 10,538 culicine larvae were collected. The habitats were characterized based on size, pH, distance to the nearest house and to the shore of Lake Victoria, coverage of canopy, surface debris, algae and emergent plants, turbidity, substrate, and habitat types. Microscopic identification of third- and fourth-instar anopheline larvae did not yield any Anopheles funestus or other anophelines. A total of 829 An. gambiae s.l. larvae from all habitats were analyzed further by rDNA-polymerase chain reaction to identify individual species within the An. gambiae species complex. Overall, An. arabiensis was the predominant species (63.4%), and An. gambiae was less common (31.4%). The species composition of An. gambiae s.l. varied significantly among the sampling sites throughout Suba District. The larval habitats in the southern area of the district had a higher proportion of An. gambiae than in the northern area. Multiple logistic analysis did not detect any significant association between the occurrence of anopheline larvae and habitat variables, and principal component analysis did not identify key environmental factors associated with the abundance of An. gambiae. However, significant spatial heterogeneity in the relative abundance of An. gambiae within the Suba district was detected. When the effect of larval habitat locality was considered in the analysis, we found that the distance to the nearest house and substrate type were significantly associated with the relative abundance of An. gambiae. Future studies integrating detailed water chemistry analysis, remote sensing technology, and the ecology of predators may be required to further elucidate the mechanisms underlying the observed spatial variation of anopheline larval distribution.

Animals↗
PubMed1989

The development of spatial distributions of CFU-S and in-vitro CFC in femora of mice of different ages.

The radial distributions of spleen colony forming units (CFU-S) and in-vitro colony forming cells (in-vitro-CFC) were measured in the diaphyseal marrow cavity of femora removed from 3-, 5- and 11-week-old mice. The distributions observed in 11-week-old mice confirm earlier findings that the highest concentrations of CFU-S exist near bone surfaces whereas the concentration of in-vitro-CFC increases to a peak value approximately 300 microns from the femoral axis with a low value at the bone surface. The gradients of the distributions in all three age groups are very similar suggesting that spatial organization in marrow is established by 3 weeks at the latest and, as the marrow cavities grow, so the distributions extend into the new space following their respective gradients. The peak of CFU-S concentration at the bone surfaces in all age groups coincides with increased rates of DNA synthesis and a low self-renewal capacity. Conversely, CFU-S nearer the centre of the cavity maintain a low turnover but have a high self-renewal capacity. Measurements made on 1-week-old mice show that the marrow contains a lower average concentration of CFU-S in the femoral cavity compared to older mice. However, these CFU-S have both a high rate of turnover and a high self-renewal capacity. It appears that these better quality CFU-S remain in a central location while the rest of the population ages and expands in association with growing bone regions.

Aging↗
PubMed2005

Spatial distribution and temporal variation of Microcystis species composition and microcystin concentration in Lake Biwa.

Spatial and temporal variation in Microcystis species composition and microcystin concentration, quantified by enzyme-linked immunosorbent assay and high-performance liquid chromatography, were investigated during a 3-year period (1998-2000) in the Northern Basin of Lake Biwa. The Northern Basin generally had a concentration of 5 microg L(-1) or less, except at station 1 (Nagahama Bay) from July to October during the study period. The maximum concentration at station 1 was 22.7, 35.9, and 22.0 microg L(-1) in October of 1998, 1999, and 2000, respectively. Eleven species of cyanobacteria were observed: Microcystis aeruginosa, M. ichthyoblabe, M. novacekii, M. wesenbergii, Oscillatoria raciborskii, Anabaena oumiana, A. affinis, A. flos-aquae, A. ucrainica, A. smithii, and A. crassa. Of these, M. aeruginosa and M. wesenbergii were the main components observed. A high concentration of microcystin in the lake water was mostly a result of variation in the relative amount of toxic M. aeruginosa rather than of the total Microcystis cell number. This was supported by the analytical results for isolated strains. Microcystis spp. cell density in the Northern Basin appeared to increase gradually over the course of the study. This is the first study to have surveyed the Northern Basin of Lake Biwa, which supplies drinking water to 14 million people and is the largest lake in Japan.

Chromatography, High Pressure Liquid↗
PubMed1998

Prostatic intraepithelial neoplasia and atypical adenomatous hyperplasia. Relationship to pathologic parameters, volume and spatial distribution of carcinoma of the prostate.

OBJECTIVE: To summarize studies that have investigated the morphologic, spatial and volumetric relationship between prostate cancer and its putative precursors, high grade prostatic intraepithelial neoplasia (HGPIN) and atypical adenomatous hyperplasia (AAH). METHODS: Studies addressing the relationship between morphologic parameters of prostate cancer (i.e., stage, grade, volume and anatomic distribution) and both HGPIN and AAH are reviewed. Similar data based on our institutional experience with surgical and autopsy series of step-sectioned, totally embedded prostate glands are also presented. RESULTS: Most investigators have demonstrated significant associations between HGPIN and carcinoma in terms of coexistence, "zonal" origin and physical proximity. The two lesions have a high tendency to be present simultaneously; both originate predominantly in the peripheral zone and are often found within the same microscopic field. Reports on the relationship between HGPIN and the stage of prostate cancer are less consistent, and the associations of this lesion with cancer grade and volume are exceedingly complex. HGPIN appears to be associated with moderately to poorly differentiated, smaller, often-multifocal tumors and is less frequent in large, high grade cancers. There are data suggesting a trend-of a reciprocal relationship between more extensive and diffuse HGPIN and large-volume prostate cancers. Conversely, there is a wide spectrum of volume distribution of the two lesions in glands harboring smaller tumors. Similar data concerning AAH are limited. CONCLUSION: There are strong and consistent data supporting various aspects of the morphologic associations between HGPIN and prostate cancer. The indications that glands harboring larger tumors tend to contain less extensive HGPIN could raise the hypothesis that as carcinoma becomes larger, it may replace areas of the gland previously occupied by HGPIN. Alternatively, prostate cancer can evolve from ducts with HGPIN and gradually overgrow their precursor. There is a relative dearth of similar information concerning AAH.

Adenoma↗
PubMedDate not supplied

[The scaling method of spatial distribution of keratinocytes in the basal layer of epidermis in norm and during the development of psoriatic lesion].

On the basis of the modern conceptions postulating that the growing layer of normal epidermis contains two populations of keratinocytes differing greatly in the rate of mitotic division (stem and transient cells), a hypothesis was proposed that explains the reason for the establishment of the portion of the proliferating fraction close to 60%. A relationship between this value and the distribution of keratinocytes of the basal layer in space was demonstrated, and formulae for its calculation were derived. Possible pathways of the transition from the normal spatial configuration to the distribution typical for the focal lesion in psoriasis were analyzed when all stem cells begin to divide vigorously, and the size of the population of transient cells is 100%.

Algorithms↗
PubMed2002

Trends and spatial distribution of deaths of children aged 12-60 months in São Paulo, Brazil, 1980-98.

OBJECTIVE: To describe trends in the mortality of children aged 12-60 months and to perform spatial data analysis of its distribution at the inner city district level in São Paulo from 1980 to 1998. METHODS: Official mortality data were analysed in relation to the underlying causes of death. The population of children aged 12-60 months, disaggregated by sex and age, was estimated for each year. Educational levels, income, employment status, and other socioeconomic indices were also assessed. Statistical Package for Social Sciences software was used for the statistical processing of time series. The Cochrane-Orcutt procedure of generalized least squares regression analysis was used to estimate the regression parameters with control of first-order autocorrelation. Spatial data analysis employed the discrimination of death rates and socioeconomic indices at the inner city district level. For classifying area-level death rates the method of K-means cluster analysis was used. Spatial correlation between variables was analysed by the simultaneous autoregressive regression method. FINDINGS: There was a steady decline in death rates during the 1980s at an average rate of 3.08% per year, followed by a levelling off. Infectious diseases remained the major cause of mortality, accounting for 43.1% of deaths during the last three years of the study. Injuries accounted for 16.5% of deaths. Mortality rates at the area level clearly demonstrated inequity in the city's health profile: there was an increasing difference between the rich and the underprivileged social strata in this respect. CONCLUSION: The overall mortality rate among children aged 12-60 months dropped by almost 30% during the study period. Most of the decline happened during the 1980s. Many people still live in a state of deprivation in underserved areas. Time-series and spatial data analysis provided indications of potential value in the planning of social policies promoting well-being, through the identification of factors affecting child survival and the regions with the worst health profiles, to which programmes and resources should be preferentially directed.

Brazil↗