Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “FLUORENES”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 595 records · Page 33Linked to original sources
PubMed1999

Foliar modifications induced by inhibition of polar transport of auxin.

The effects of auxin polar transport inhibitors, 9-hydroxy-fluorene-9-carboxylic acid (HFCA); 2, 3, 5-triiodobenzoic acid (TIBA) and trans-cinnamic acid (CA) on leaf pattern formation were investigated with shoots formed from cultured leaf explants of tobacco and cultured pedicel explants of Orychophragmus violaceus, and the seedlings of tobacco and Brassica chinensis. Although the effective concentration varies with the inhibitors used, all of the inhibitors induced the formation of trumpet-shaped and/or fused leaves. The frequency of trumpet-shaped leaf formation was related to the concentration of inhibitors in the medium. Histological observation of tobacco seedlings showed that there was only one main vascular bundle and several minor vascular bundles in normal leaves of the control, but there were several vascular bundles of more or less the same size in the trumpet-shaped leaves of treated ones. These results indicated that auxin polar transport played an important role on bilateral symmetry of leaf growth.

Biological Transport↗
PubMed2003

Quantification of 2-hydroxyfluorene in human urine by column-switching high performance liquid chromatography with fluorescence detection.

A high performance liquid chromatographic (HPLC) method for the quantification of 2-hydroxyfluorene (2-OHF) in normal human urine was established using deuterated 2-hydroxyfluorene (2-OHF-d9) as an internal standard with column-switching and fluorescence detection. The 2-OHF-d9 was synthesized by the metabolism of deuterated fluorene with cytochrome P450. The analytes were cleaned up on an ODS pre-column, via column-switching, and separated on an alkylamide-type reversed phase column. The internal standard eluted immediately prior to non-deuterated 2-OHF on the HPLC system and had nearly the same fluorescence characteristics as the non-deuterated 2-OHF. The detection limit was 0.03 nmol l(-1) (S/N = 3) and the calibration range of urine sample was from 0.2 to 50 nmol l(-1). The urine sample treatment involved enzymatic hydrolysis followed by solid phase extraction using a Sep-Pak C18 cartridge. 2-OHF was observed in the form of conjugates such as glucuronide and/or sulfate in human urine, and urinary metabolites were completely hydrolyzed for 2 h with beta-glucuronidase/aryl sulfatase. The proposed method was used to determine urinary 2-OHF in smokers and non-smokers, and showed that the urinary concentrations of 2-OHF in smokers were significantly higher than those in non-smokers (P < 0.01). Thus, the data suggest that urinary 2-OHF might be a sensitive and specific biological marker for the assessment of the exposure to polycyclic aromatic hydrocarbons.

Biomarkers↗
PubMed2006

Static and dynamic solution properties of monodisperse oligofluorenes.

Dynamic light scattering techniques were employed for the study of molecular and collective properties of newly synthesized oligomers (n = 3-7) of the polyfluorene in toluene solutions. At low concentrations, the molar mass, interaction parameter, optical anisotropy and the transport coefficients for translational and rotational diffusion provide a consistent description using a rigid rod model with thickness b = 0.6 nm and length L = nl (l = 0.75 nm). This description is in agreement with the persistence length (6-7 nm) reported for the fluorene polymers. In the non-dilute regime, the estimated concentration for the lyotropic transition further supports the proposed molecular shape and the second slow process in the intermediate scattering function relates to the formation of almost spherical clusters above about 30%.

Anisotropy↗
PubMed2003

Degradation of straight-chain aliphatic and high-molecular-weight polycyclic aromatic hydrocarbons by a strain of Mycobacterium austroafricanum.

AIMS: Our goal was to characterize a newly isolated strain of Mycobacterium austroafricanum, obtained from manufactured gas plant (MGP) site soil and designated GTI-23, with respect to its ability to degrade polycyclic aromatic hydrocarbons (PAHs). METHODS AND RESULTS: GTI-23 is capable of growth on phenanthrene, fluoranthene, or pyrene as a sole source of carbon and energy; it also extensively mineralizes the latter two in liquid culture and is capable of extensive degradation of fluorene and benzo[a]pyrene, although this does not lead in either of these cases to mineralization. Supplementation of benzo[a]pyrene-containing cultures with phenanthrene had no significant effect on benzo[a]pyrene degradation; however, this process was substantially inhibited by the addition of pyrene. Extensive and rapid mineralization of pyrene by GTI-23 was also observed in pyrene-amended soil. CONCLUSIONS: Strain GTI-23 shows considerable ability to mineralize a range of polycyclic aromatic hydrocarbons, both in liquid and soil environments. In this regard, GTI-23 differs markedly from the type strain of Myco. austroafricanum (ATCC 33464); the latter isolate displayed no (or very limited) mineralization of any tested PAH (phenanthrene, fluoranthene or pyrene). When grown in liquid culture, GTI-23 was also found to be capable of growing on and mineralizing two aliphatic hydrocarbons (dodecane and hexadecane). SIGNIFICANCE AND IMPACT OF THE STUDY: These findings indicate that this isolate of Myco. austroafricanum may be useful for bioremediation of soils contaminated with complex mixtures of aromatic and aliphatic hydrocarbons.

Alkanes↗
PubMed2005

Optical properties of low band gap alternating copolyfluorenes for photovoltaic devices.

In a joint experimental and theoretical work the optical response and excited-state character of two novel conjugated polymers for photovoltaic applications are studied. The polymers, alternating polyfluorene (APFO) Green 1 and APFO Green 2, are both copolymers of fluorene, thiophene, and electron accepting groups. The band gaps are extended into the red and near infrared with onsets of 780 and 1000 nm, respectively, due to alternating donor and acceptor moieties along the polymer chain. Spectroscopic ellipsometry and subsequent modeling made it possible to extract the dielectric function in the range of 260-1200 nm. Semiempirical quantum chemical calculations (ZINDO) revealed the character of the main electronic transitions in the studied spectral region. The spectral band just above 400 nm was assigned to a delocalized pi-pi* transition for both polymers. The red band lying at 622 and 767 nm in the two polymers corresponds to an electronic state mainly occupying the acceptor units and having a strong charge-transfer character. We show that the ZINDO transition energies are valuable input to the application of Lorentz oscillators in modeling of the dielectric function of the polymer material.

Caprylates↗
PubMed2004

Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.

The carcinogen 2-acetylaminofluorene forms two major DNA adducts: N-(2'-deoxyguanosin-8-yl)-2-acetylaminofluorene (dG-AAF) and its deacetylated derivative, N-(2'-deoxyguanosin-8-yl)-2-aminofluorene (dG-AF). Although the dG-AAF and dG-AF adducts are distinguished only by the presence or absence of an acetyl group, they have profoundly different effects on DNA replication. dG-AAF poses a strong block to DNA synthesis and primarily induces frameshift mutations in bacteria, resulting in the loss of one or two nucleotides during replication past the lesion. dG-AF is less toxic and more easily bypassed by DNA polymerases, albeit with an increased frequency of misincorporation opposite the lesion, primarily resulting in G --> T transversions. We present three crystal structures of bacteriophage T7 DNA polymerase replication complexes, one with dG-AAF in the templating position and two others with dG-AF in the templating position. Our crystallographic data suggest why a dG-AAF adduct blocks replication more strongly than does a dG-AF adduct and provide a possible explanation for frameshift mutagenesis during replication bypass of a dG-AAF adduct. The dG-AAF nucleoside adopts a syn conformation that facilitates the intercalation of its fluorene ring into a hydrophobic pocket on the surface of the fingers subdomain and locks the fingers in an open, inactive conformation. In contrast, the dG-AF base at the templating position is not well defined by the electron density, consistent with weak binding to the polymerase and a possible interchange of this adduct between the syn and anti conformations.

2-Acetylaminofluorene↗
PubMed1974

Chemical carcinogens as frameshift mutagens: Salmonella DNA sequence sensitive to mutagenesis by polycyclic carcinogens.

Other investigators have shown that several polycyclic carcinogens are frameshift mutagens in Salmonella. Mutagenic potency of these compounds is assessed by ability to induce reversion of histidine-requiring frameshift mutants to prototrophy. One frameshift mutation in the histidinol dehydrogenase gene, hisD3052, is unusually sensitive to mutagenesis by certain polycyclic carcinogens. We find that the 3052 mutation is a - 1 deletion, probably loss of a G.C pair from a DNA repeat of [unk]. The polycyclic carcinogens tested (e.g., 2-nitroso-fluorene) revert 3052 by deleting a [unk] doublet from the DNA sequence [unk], which is close to the 3052 site. This rare mispairing-prone sequence represents the carcinogen-sensitive "hotspot" in 3052. The ICR compounds, noncarcinogenic intercalating agents, show a broader specificity of mutagenesis. Reversion with these mutagens occurs predominantly by two mechanisms: one identical to that of the polycyclic carcinogens, and the other by +1 additions in a third DNA tract narrowly separated from the 3052 site. The alkylating carcinogen N-methyl-N'-nitro-N-nitrosoguanidine appears to have a similar dual specificity. DNA base changes in 3052 revertants have been correlated with properties of histidinol dehydrogenase in crude extracts. This correlation of DNA base sequence with electrophoretic and other properties of the mutant proteins allows one to analyze easily the specificity of new mutagens that mutate this strain.

Acridines↗
PubMed1989

Excision of the imidazole ring-opened form of N-2-aminofluorene-C(8)-guanine adduct in poly(dG-dC) by Escherichia coli formamidopyrimidine-DNA glycosylase.

A polynucleotide containing N-(deoxyguanosine-8-yl)-2-aminofluorene residues (dGuo-C8-AF) was obtained by treatment of poly(dG-dC) with [3H]ring-N-hydroxy-2-amino-fluorene. This substrate was further treated under alkaline conditions to convert dGuo-C8-AF residues into their imidazole ring-opened derivative or 1-[6-(2,5-diamino-4-oxo-pyrimidinyl-N-6-deoxyribose]-3-(2-fluorenyl++ +)urea (iro-dGuo-C8-AF). The ring-opening of 50% of the dGuo-C8-AF residues occurs in 24 h at 37 degrees C in the presence of 0.1 N NaOH. This modified polynucleotide was used as substrate for the homogeneous formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosyase) of Escherichia coli. Analysis of the reaction products shows that Fapy-DNA glycosylase releases the imidazole ring-opened derivative (iro-G-C8-AF). In contrast the primary adduct (G-C8-AF) is not removed. These results show that the imidazole ring-opened form of guanine residue modified at the C8 position by a bulky adduct is a substrate for the formamidopyrimidine-DNA glycosylase of E. coli. These observations show that the formamidopyrimidine-DNA glycosylase has a broad substrate specificity including imidazole ring-opened purines either modified at N7 or C8 positions in DNA. Therefore, the Fapy-DNA glycosylase might be involved in the repair of minor lesions induced by many chemical carcinogens.

DNA-Formamidopyrimidine Glycosylase↗
PubMed1990

Role of DNA polymerase 3'----5' exonuclease activity in the bypass of aminofluorene lesions in DNA.

N-(Deoxyguanosin-8-yl)-2-(acetylamino)fluorene (AAF-G) adducts in the DNA of bacteriophage M13 can be converted to N-(deoxyguanosin-8-yl)-2-aminofluorene (AF-G) adducts in situ by treatment with 1.0 M NaOH for 45 min at room temperature. The conversion is accompanied by a dramatic increase in the transfection activity of the samples which is correlated with the measured deacetylation of the acetylaminofluorene adduct. The pair of substrates (AAF-G/AF-G) with adducts at identical places in the DNA has been used to study bypass synthesis catalyzed by T7 DNA polymerase, an altered T7 DNA polymerase from which the 3'----5' exonuclease has been genetically removed by an 84 nucleotide deletion (Sequenase 2), T4 DNA polymerase and Escherichia coli DNA polymerase I. All polymerases appear blocked at acetylaminofluorene lesions. Sequenase 2 is apparently able to add nucleotides opposite the acetylaminofluorene lesion but is unable to catalyze further elongation. T7 DNA polymerase, including thioredoxin and with an active 3'----5' exonuclease, is unable to bypass aminofluorene adducts, whereas Sequenase 2 bypasses the lesions readily. The data support the view that the elongation step is rate limiting in synthesis past lesions and that low 3'----5' exonuclease activity allows the priming nucleotide opposite the altered template site to remain in position long enough for elongation past particular adducts.

Acetoxyacetylaminofluorene↗
PubMed1994

Aryl hydrocarbon (Ah) receptor-independent induction of Cyp1a2 gene expression by acenaphthylene and related compounds in B6C3F1 mice.

Treatment of B6C3F1 mice with acenaphthylene, acenaphthene, fluorene, phenanthrene, anthracene and dibenzofuran resulted in induction of hepatic microsomal methoxyresorufin O-deethylase (MROD) activity. Acenaphthylene was the most potent inducer of MROD, a Cyp1a2-dependent activity, and was utilized as a prototypical inducer for this group of tricyclic hydrocarbons. Acenaphthylene (300 mg/kg) caused a > 80-fold induction of hepatic microsomal MROD activity; no induction was observed in kidney or lung. Analysis of induced hepatic microsomes with antibodies to Cyp1a1 and Cyp1a2 showed that acenaphthylene induced immunoreactive Cyp1a2 but not Cyp1a1 proteins and subsequent mRNA analysis confirmed with a cDNA probe for Cyp1a1 and Cyp1a2 that acenaphthylene induced Cyp1a2 but not Cyp1a1 mRNA. Results from nuclear run-on experiments using hepatic nuclei showed that acenaphthylene caused an approximately 4-fold increase in the rate of Cyp1a2 gene transcription in B6C3F1 mice. Results of competitive binding studies indicated that the tricyclic hydrocarbons did not competitively displace [3H]2,3,7,8-tetrachlorodibenzo-p-dioxin or [3H]benzo[a]pyrene from the mouse hepatic cytosolic aryl hydrocarbon (Ah) receptor or 4S carcinogen binding protein respectively. The data indicate that acenaphthylene and related tricyclic hydrocarbons induce Cyp1a2 gene expression in B6C3F1 mice via an Ah receptor-independent pathway. Thus, tricyclic hydrocarbons induce Cyp1a2 without the co-induction of Cyp1a1 and therefore these relatively non-toxic compounds can be used to further probe the role of Cyp1a2 in the metabolism and metabolic activation of diverse chemical carcinogens.

Acenaphthenes↗
PubMed1996

In vivo formation of mutagens by intraperitoneal administration of polycyclic aromatic hydrocarbons in animals during exposure to nitrogen dioxide.

Consumption of fossil fuels has increased indoor and outdoor concentrations of polycyclic aromatic hydrocarbons (PAHs) and nitrogen dioxide (NO2). To study the combined effect of PAH administration and NO2 exposure on mutagenicity of urine from animals we injected 400 mg/kg body wt i.p. one of five kinds of PAH (pyrene, fluoranthene, fluorene, anthracene and chrysene) into ICR mice, Wistar rats, Syrian golden hamsters or Hartley guinea pigs after exposure to 20 p.p.m. NO2 gas for 24 h and then exposed the animals to NO2 gas for an additional 24 h. During the latter 24 h we collected the urine and assayed its mutagenicity with the Ames Salmonella strains after treatment with beta-glucuronidase and arylsulfatase and extraction with dichloromethane. The urine from mice treated with both PAH and NO2 showed high mutagenicity for Salmonella typhimurium strains TA98 and TA100, whereas the urine from mice treated with PAH and air showed almost no mutagenic activity. The mutagenicity was decreased in nitroreductase- and acetyltransferase-deficient strains TA98NR and TA98/1,8-DNP6 respectively. Treatment with a mixture of 20% of each of the five kinds of PAH and NO2 augmented the urinary mutagenicity of mice 1.5-fold. The urine from hamsters treated with pyrene or fluoranthene and NO2 was also highly mutagenic, but that from rats or guinea pigs was not very mutagenic. The mutagenicity was also decreased in strains TA98NR and TA98/1,8-DNP6. These results suggest that the urine contains nitro compounds and that the nitration of PAHs occurs in the body of animals under exposure to NO2 gas. Actually, the nitrated metabolites of pyrene, 1-nitro-6/8-hydroxypyrene and 1-nitro-3-hydroxypyrene, were detected in the urine from mice treated with pyrene under exposure to NO2 gas. To elucidate the mechanism of in vivo nitration, NO2 (20 p.p.m.) was bubbled through 50 mM Tris-HCl buffer (pH 7.4) or dichloromethane solution containing pyrene or 1-hydroxypyrene (10 microg/ml). Pyrene was not nitrated by NO2 in either aqueous or organic solutions. However, 1-hydroxypyrene was changed to nitrohydroxypyrenes by NO2 in the Tris-HCl buffer, but not in the organic solution. Ascorbic acid, alpha-tocopherol, glutathione oleic acid and hemoglobin were found to inhibit the nitration of 1-hydroxypyrene in aqueous solution. The urinary mutagenicity of mice treated with both pyrene and NO2 was also decreased by oral administration of ascorbic acid and alpha-tocopherol. These results suggest that 1-hydroxypyrene is nitrated by an ionic reaction in the animal body after hydroxylation of pyrene in the liver.

Animals↗
PubMed1982

Identification of metabolites of benzo[b]fluoranthene.

The metabolism by rat liver 9000 x g supernatant of the environmental carcinogen benzo[b]fluoranthene was investigated. The major metabolites were identified, by comparison to synthetic samples, as 5- and 6-hydroxybenzo[b]fluoranthene and 4- and 7-hydroxybenzo[b]fluoranthene. The principal dihydrodiol metabolite formed under these conditions was trans-11,12-dihydro-11,12-dihydroxybenzo[b]fluoranthene, which was identified by comparison to the synthetic compound. 1,2-Dihydro-1,2-dihydroxybenzo[b]fluoranthene was identified, by its mass spectrum and by comparison if its u.v. spectrum to that of a synthetic model compound, 11-ethylidene-11H-benzo[b]fluorene. No evidence was obtained for the formation of 7b,8-dihydro-7,8-dihydroxybenzo[b]fluoranthene or trans-9,10-dihydro-9,10-dihydroxybenzo[b]fluoranthene. The latter would be the precursor to a bay region dihydrodiol epoxide of benzo[b]fluoranthene.

Animals↗
PubMed1986

2-Nitrofluoren-9-one: a unique mutagen formed in the photo-oxidation of 2-aminofluorene.

Exposure of solutions of 2-aminofluorene (2-AF, dissolved in dimethylsulfoxide) to near ultraviolet light (u.v.a. wavelengths of 320-400 nm) results in the formation of a variety of photo-products, several of which are direct-acting mutagens in the Ames/Salmonella standard-plate assay. Previously published results from our laboratory have described the chemical identification and kinetics of formation of two of these photo-induced mutagens, 2-nitrosofluorene and 2-nitrofluorene. In this report we present recent data concerning the isolation and chemical identification of another mutagenic photoproduct of u.v.a.-irradiated 2-AF, 2-nitrofluoren-9-one (2-NO2F-9-one). Data are also presented concerning the kinetics of phototransformation of 2-aminofluoren-9-one, an early-appearing and predominant photoproduct in u.v.a.-irradiated solutions of 2-AF, into 2-NO2F-9-one. It is well established that N-oxidation is a critical step in the biotransformations (i.e. enzymatic metabolism) of primary aromatic amines into proximate mutagens/carcinogens. In addition to u.v.a.-mediated N-oxidation of aromatic amines, selective ring photo-oxidation can also occur, resulting in, for example, the production of a carbonyl group at the 9-position of the fluorene molecule. The formation of mutagenic 2-NO2F-9-one in the photochemical oxidation of 2-AF appears to be unique to this process.

Chromatography, High Pressure Liquid↗
PubMed1986

Molecular structure of 1,8-dimethylfluoren-9-one.

The molecular and crystal structure of the synthetic 1,8-dimethyl derivative of 9H-fluoren-9-one (F-9-one) has been determined by direct methods from X-ray diffractometric data and refined to an R index of 0.035 over 1216 independent reflections. With a mutual inclination between benzene rings of 178.6 degrees, the molecule is closely planar; of the non-hydrogen atoms, only the oxygen is as much as 0.08 A out of the plane defined by the ring-joining carbons C(10), C(11), C(12) and C(13). Neither the carbonyl bond nor the beach bond C(11)-C(12) differs significantly from the corresponding bonds in F-9-one and the 2,7-diamino compound; C-C bonds involving methyl carbons and the keto carbon are all very close to 1.50 A long (e.s.d. 0.003 A). The C-C(methyl) bonds are bent so that angles C(10)-C(1)-C(14) and C(13)-C(8)-C(15) are about 123 degrees, while the methyl groups are orientated with one hydrogen from each pointing away from the carbonyl group.

Crystallization↗
PubMed1987

Metabolism of the carcinogenic air pollutant 2-nitrofluorene in the rat.

After a single oral dose of 2-nitro [9-14C]fluorene to rats, radioactivity with associated mutagenic activity was rapidly excreted in both urine and faeces, urine being the major excretory route. The major part of the urinary mutagenicity was associated with the unconjugated fraction of metabolites which consisted of a range of hydroxylated acetylaminofluorenes in addition to a number of hydroxylated nitrofluorenes. The formation of hydroxylated acetylaminofluorenes supports the contention that 2-nitrofluorene, in vivo, enters the metabolic pathway of the well-known carcinogen 2-acetylaminofluorene. The single most mutagenic metabolite of 2-nitrofluorene was a hydroxylated nitrofluorene; the formation of this metabolite was markedly increased when the rats had been treated with beta-naphthoflavone. Finally, an alternative pathway is discussed for the formation of 1- and 3-hydroxyacetylaminofluorenes.

2-Acetylaminofluorene↗
PubMed1988

The role of the intestinal microflora in the formation of mutagenic metabolites from the carcinogenic air pollutant 2-nitrofluorene.

After a single oral dose of 2-nitro[9-14C]fluorene (NF) to germfree and conventional rats, radioactivity with associated mutagenic activity was rapidly excreted in both urine and feces. The mutagenicity excreted from germfree animals exceeded the mutagenicity excreted from conventional animals. Absence of the microflora resulted in lack of nitroreduction and excreted metabolites from germfree rats were mono- or dihydroxylated nitrofluorenes, as assessed by liquid chromatography/mass spectrometry (LC/MS). These hydroxy-NFs were associated with the high direct-acting mutagenicity that was excreted in germfree animals. Only traces of NF were found in urine from germfree rats and no NF was detected in urine from conventional animals. Thus, in contrast to a number of reports on other mutagenic compounds, these results would tend to indicate that the intestinal microflora causes a reduced excretion of mutagenic metabolites of NF.

Air Pollutants↗
PubMed1988

A spectroscopic study of the conformation of poly d(G-C).poly d(G-C) modified with the carcinogenic 2-aminofluorene.

The conformational properties of both the B- and Z-form helix of the 2-aminofluorene (AF) modified synthetic polynucleotide poly d(G-C).poly d(G-C) were extensively studied with a variety of optical techniques (UV absorbance, linear dichroism, circular dichroism and fluorescence spectroscopy). The spectroscopic results show, that: (i) the presence of the AF adduct in poly d(G-C).poly d(G-C) facilitates the conversion of the right-handed B-form polynucleotide to the left-handed Z-type poly d(G-C).poly d(G-C) duplex; (ii) in B- as well as in Z-form poly d(G-C).poly d(G-C)-AF the carcinogenic residue is situated in a specific and ordered complex with the DNA, in which the AF chromophore is significantly immobilized and the long axis of the fluorene ring system is positioned in a parallel mode to the DNA base planes; (iii) in B-type poly d(G-C).poly d(G-C)-AF the carcinogenic residue exhibits strong stacking interactions with the adjacent DNA bases, which are coupled to an important destabilization of the AF-containing B-duplex; (iv) in contrast to the B-form complex, the AF-containing Z-type DNA is highly stabilized and a remarkable reduction of the AF-base interactions is observed; (v) in Z-form poly d(G-C).poly d(G-C)-AF the AF chromophore resides at a medium-exposed position. The combined data support a conformational model, in which the planar AF is inserted in the B-type polynucleotide helix, while the carcinogenic residue in the Z-form poly d(G-C).poly d(G-C)-AF structure is placed in an outside position.

Carcinogens↗