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Ab initio study of the role of entropy in the kinetics of acetylene production in filament-assisted diamond growth environments.

We present a new theoretical strategy, ab initio rate constants plus integration of rate equations, that is used to characterize the role of entropy in driving high-temperature/low-pressure hydrocarbon chemical kinetics typical of filament-assisted diamond growth environments. Twelve elementary processes were analyzed that produce a viable pathway for converting methane in a feed gas to acetylene. These calculations clearly relate the kinetics of this conversion to the properties of individual species, demonstrating that (1) loss of translational entropy restricts addition of hydrogen (and other radical species) to unsaturated carbon-carbon bonds, (2) rotational entropy determines the direction of the rate-limiting abstraction reactions, and (3) the overall pathway is enhanced by high beta-scission reaction rates driven by translational entropy. These results suggest that the proposed strategy is likely applicable to understand gas-phase chemistry occurring in the systems of combustion and other chemical vapor depositions.

Alkynes↗

Role of projectile and surface temperatures in the energy transfer dynamics of protonated peptide ion collisions with the diamond {111} surface.

The effects of temperature on energy transfer during collisions of protonated diglycine ions, Gly(2)-H(+), with a diamond {111} surface were investigated by chemical dynamics simulations. The simulations were performed for a collision energy of 70 eV and angle of 0 degrees with respect to the surface normal. In one set of simulations the initial surface temperature, T(surf), was varied from 300 to 2000 K, while the Gly(2)-H(+) vibrational and rotational temperatures were maintained at 300 K. For the second set of simulations the Gly(2)-H(+) vibrational temperature, T(vib), was varied from 300 to 2000 K, keeping both the Gly(2)-H(+) rotational and surface temperatures at 300 K. Increasing either the surface temperature or Gly(2)-H(+) vibrational temperature to values as high as 2000 K has, at most, only a negligible effect on the partitioning of the incident collision energy to the surface and to the vibrational and rotational modes of Gly(2)-H(+). To a good approximation, the initial surface and peptide ion energies are nearly adiabatic during the collisional energy transfer. This adiabaticity of the initial peptide ion energy agrees with experiments (J. Phys. Chem. A 2004, 108, 1). A more quantitative analysis of the effects of T(vib) and T(surf) shows there are small, but noticeable, effects on the energy transfer efficiencies. Namely, increasing the vibrational or surface temperature results in a near-linear decrease in the energy transfer to the degrees of freedom associated with this temperature.

Diamond↗

Investigation of electro-oxidation of methanol and benzyl alcohol at boron-doped diamond electrode: evidence for the mechanism for fouling film formation.

Boron-doped diamond (BDD) and glassy carbon (GC) electrodes are compared for electrochemical oxidation of methanol and benzyl alcohol. Cyclic voltammograms reveal that BDD electrode produces good oxidation signals for both methanol and benzyl alcohol, while GC produces no significant oxidation signal for either methanol or benzyl alcohol. Amperometric measurement of oxidation of methanol and benzyl alcohol on BDD shows development of a fouling film for benzyl alcohol but not for methanol. Prolonged (24 h) polarization of the BDD electrode at +2.0 V in benzyl alcohol generated enough fouling film for investigation by AFM, SEM, Raman, and FTIR techniques. AFM and SEM microscopy images confirm a fouling film confined to the low-lying regions of the polycrystallite BDD surface, indicating that the active sites of benzyl alcohol oxidation are located within these low-lying regions. The fouling material generated in the process of benzyl alcohol oxidation was identified from Raman and FTIR spectroscopy as polyester. Experiments confirm the fouling film can be removed and the electrode surface reactivated by brief polarization at +3.0 V. Amperometric results of concentration dependence confirm the BDD electrode is well suited for quantitative analysis applications of methanol and benzyl alcohol, with recognizable oxidation currents at micromolar concentration levels.

Alcohols↗

Are diamond nanoparticles cytotoxic?

Finely divided carbon particles, including charcoal, lampblack, and diamond particles, have been used for ornamental and official tattoos since ancient times. With the recent development in nanoscience and nanotechnology, carbon-based nanomaterials (e.g., fullerenes, nanotubes, nanodiamonds) attract a great deal of interest. Owing to their low chemical reactivity and unique physical properties, nanodiamonds could be useful in a variety of biological applications such as carriers for drugs, genes, or proteins; novel imaging techniques; coatings for implantable materials; and biosensors and biomedical nanorobots. Therefore, it is essential to ascertain the possible hazards of nanodiamonds to humans and other biological systems. We have, for the first time, assessed the cytotoxicity of nanodiamonds ranging in size from 2 to 10 nm. Assays of cell viability such as mitochondrial function (MTT) and luminescent ATP production showed that nanodiamonds were not toxic to a variety of cell types. Furthermore, nanodiamonds did not produce significant reactive oxygen species. Cells can grow on nanodiamond-coated substrates without morphological changes compared to controls. These results suggest that nanodiamonds could be ideal for many biological applications in a diverse range of cell types.

Carbon↗

Biosensing properties of diamond and carbon nanotubes.

The biochemical properties of boron-doped diamond (BDD), carbon nanofiber, fullerene, and multiwalled carbon nanotube (MWCNT) electrodes have been investigated comparatively. Physiochemical factors which affect the biosensing properties such as surface hydrophobicities, effective surface area, and intrinsic material properties are studied. Voltammetric responses of the as-grown thin film electrode and surface-modified electrode to biomolecules such as L-ascorbic acid (L-AA), dopamine (DA), and uric acid are examined. As-grown MWCNT electrodes exhibit selective voltammetric responses to the different biomolecules and faster electron-transfer kinetics compared to BDD. The selective response is due to the considerably lower anodic potential of L-AA on MWCNT (-48 mVvs Ag/AgCl compared to 575 mV on BDD). This electrocatalytic response can be replicated on a nonselective carbon nanofiber electrode by coating it with gold nanoparticles. BDD has no intrinsic selective response to L-AA, and surface modification by anodic polarization is necessary for resolving L-AA and DA.

Ascorbic Acid↗

Use of zirconium-phosphate-carbonate chemistry to immobilize polycyclic aromatic hydrocarbons on boron-doped diamond.

We report on the formation of monomolecular layers of perylene- and pyrene-alkanoic acids on boron-doped diamond (BDD) substrates. The carboxylic acid layers are bound by coordination to zirconium phosphate (ZP) functionalities on the BDD substrate surface. The resulting Zr-phosphate-carbonate (ZPC) linkages between the substrate and the adlayer are asymmetric, of the form -(OPO3(2-) Zr4+-O2C-R)+ X-. Pyrene and perylene are well-established optical probes of polarity and viscosity at interfaces. We have used electrochemical and steady-state fluorescence techniques to study the loading density and behavior of these monomolecular films, allowing comparison of BDD and indium-doped tin oxide (ITO) substrates. Electrochemical data suggest that the pyrene chromophores are positioned roughly at the same distance from the surface, regardless of the length of the anchoring alkanoic acid chain, a finding that can be explained by the pyrene lying on the substrate surface. Such a conformation is plausible given the surface coverage (5 x 10(-11) mol/cm2, ca. 0.1 monolayer) we measure for these systems.

Boron↗

Synthetic nanocrystalline diamond as a third-generation biosensor support.

Horseradish peroxidase (HRP) has been immobilized on the surface of functionalized nanocrystalline diamond (NCD) thin films. The structure of the modified NCD surface as well as the electrochemical behavior of the whole system was characterized by impedance spectroscopy and cyclic voltammetry. The proximity of HRP heme groups to the NCD surface allowed direct electron transfer between them, resulting in two separated one-electron-transfer peaks at 0.05 V and 0.29 V vs Ag/AgCl, corresponding to the cathodic and anodic process, respectively. The heterogeneous electron-transfer constant for both processes was calculated to be 0.066 s(-1), the charge-transfer coefficient alpha = 0.49, and the immobilized enzymatic layer about 2.10(-10) mol/cm2. The modified NCD electrode was used as a third-generation biosensor for hydrogen peroxide determination showing a linear response in the 0.1-45 mM H2O2 range, at +0.05 V vs Ag/AgCl.

Biosensing Techniques↗

Thermal conductivity of diamond nanorods: Molecular simulation and scaling relations.

Thermal conductivities of diamond nanorods are estimated from molecular simulations as a function of radius, length, and degree of surface functionalization. While thermal conductivity is predicted to be lower than carbon nanotubes, their thermal properties are less influenced by surface functionalization, making them prime candidates for thermal management where heat transfer is facilitated by cross-links. A scaling relation based on phonon surface scattering is developed that reproduces the simulation results and experimental measurements on silicon nanowires.

Computer Simulation↗

Cavity QED with diamond nanocrystals and silica microspheres.

Normal mode splitting is observed in a cavity QED system in which nitrogen vacancy centers in diamond nanocrystals are coupled to whispering gallery modes in a silica microsphere. The composite nanocrystal-microsphere system takes advantage of the exceptional spin properties of nitrogen vacancy centers as well as the ultrahigh quality factor of silica microspheres. The observation of the normal mode splitting indicates that the dipole optical interaction between the relevant nitrogen vacancy center and whispering gallery mode has reached the strong coupling regime of cavity QED.

Diamond↗

Mechanical wear behavior of nanocrystalline and multilayer diamond coatings on temporomandibular joint implants.

We used microwave plasma chemical vapor deposition to deposit nanocrystalline and multilayer (nanocrystalline/microcrystalline/nanocrystalline) diamond thin films on Ti-6AI-4V substrates imitating the condyle and fossa components of the temporomandibular joint. We tested the condyle/fossa pairs for wear in a mandibular movement simulator for an equivalent of two years of clinical use. Analysis of the wear surfaces by optical microscopy, scanning electron microscopy (SEM), and Raman spectroscopy showed that damage in both the films was minimal, no loss of film occurred and the wear performance was superior for the multilayer film. Comparisons with an uncoated condyle/fossa pair showed that the coated temporomandibular joint pairs had improved wear performance.

Diamond↗

Diamond-coated sonic tips are more efficient for open debridement of molar furcations. A comparative manikin study.

BACKGROUND/AIMS: The aim of this study was to compare the efficacy of open debridement of class II and III furcations by a new diamond-coated sonic instrument tip (Sonicparo) with a conventional sonic insert (Sonicrecall) and hand instruments (Gracey curettes). METHOD: Open debridement was simulated using a manikin head and standardised plastic teeth. The efficacy of debridement was examined by 3 parameters: residual root surface marker, 'tooth' weight loss and time taken for debridement. The teeth used were 1st and 2nd upper and lower molars. Upper left and lower right molars were chosen to represent class II furcation involvements and upper right and lower left molars class III furcation involvements. Each tooth was debrided 4 times with each instrument for both class of furcations. RESULTS: The results of this study showed significantly less residual marker area comparing Sonicparo with Gracey curettes (mean difference 2.52 mm2, p<0.001). However, no significant differences in marker removal were observed between Sonicrecall inserts and the other instruments. Sonicparo inserts also took significantly less time to debride the furcation than Gracey curettes (mean difference 98.3 s, p<0.001) or Sonicrecall instruments (mean difference 74.3 s, p<0.001). However no significant differences were found between instruments concerning weight loss of the plastic teeth. CONCLUSIONS: It was concluded from this in-vitro study that the Sonicparo insert was a more efficient instrument for open molar furcation debridement than Sonicrecall and hand instruments (Gracey curettes) when considering both marker removal and debridement time.

Analysis of Variance↗

Ten novel Diamond-Blackfan anemia mutations and three polymorphisms within the rps19 gene.

INTRODUCTION: A total of 25% of patients presenting with Diamond-Blackfan anemia (DBA) carry mutations in the rps19 gene, which encodes protein RPS19 of the small ribosomal subunit. The other DBA cases carry mutations in other, unknown gene(s). MATERIALS AND METHODS: We searched mutations in 48 DBA families or isolated patients based on PCR of exons of the rps19 gene and automatic sequencing. We also studied three novel intronic polymorphisms in 85 persons (most of the patients and their relatives, when the latter could be investigated). RESULTS: We identified 10 new mutations within the rps19 gene. We found no obvious correlation between the clinical expression and the nature of the mutation. Besides, we found three polymorphisms within the rps19 gene. Polymorphisms a, b and c were (i) a one-base insertion (+c at position +79) in intron 2, (ii) the g-->c substitution at position +89 also in intron 2 and (iii) the g-->a substitution at position +14 in intron 4. Inheritance studies showed that the polymorphisms were transmitted en bloc, thus defining the --- haplotypes (changes absent) and the +++ haplotypes (changes present). The percentages of each haplotype were about 50% in families and isolated persons with DBA, as well as in controls. CONCLUSION: For the 10 novel mutations found in the rps19 gene, there were no obvious genotype-phenotype correlations. The transmission of the polymorphisms was en bloc and the studies did not suggest any clinical correlates at this stage.

Anemia, Diamond-Blackfan↗

Sono-cathodic stripping voltammetry of manganese at a polished boron-doped diamond electrode: application to the determination of manganese in instant tea.

Ultrasonically assisted cathodic stripping voltammetry at a boron-doped diamond electrode was developed for the detection of manganese. Differential-pulse voltammetry was used to give the analytical signal from a cathodic strip of electrodeposited MnO2; linearity was observed from 10(-11) M to at least 3 x 10(-7) M, with 10(-11) M being the detection limit for a 2 min deposition. The procedure involves both ultrasonic-anodic deposition of MnO2 and ultrasonic-cathodic stripping. This novel analytical tool is robust, reproducible, mercury free, oxygen insensitive and highly specific towards manganese. The differential-pulse sono-cathodic stripping voltammetric technique was used to determine successfully the manganese content of two instant tea samples, giving excellent agreement with independent AAS analyses.

Boron↗

Electrochemical analysis of nucleic acids at boron-doped diamond electrodes.

Highly conductive boron-doped diamond (BDD) electrodes are well suited for performing electrochemical measurements of nucleic acids in aqueous solution under diffusion-only control. The advantageous properties of this electrodic material in this context include reproducibility and the small background currents observed at very positive potentials, along with its robustness under extreme conditions so offering promising capabilities in future applications involving thermal heating or ultrasonic treatment. tRNA, single and double stranded DNA and 2'-deoxyguanosine 5'-monophosphate (dGMP) have been studied and well defined peaks were observed in all cases, directly assignable to the electro-oxidation of deoxyguanosine monophosphate.

Boron↗

Selective amperometric detection of dopamine using OPPy-modified diamond microsensor system.

Highly boron-doped diamond microfiber electrodes (BDDMF) were fabricated and characterized by the use of Scanning Electron Microscopy (SEM), Raman spectroscopy, and cyclic voltammetry. Amperometric detection of dopamine (DA), a neurotransmitter was achieved at pH 7.0, using BDDMF electrodes. The interferences from ascorbic acid (AA) and DOPAC were efficiently eliminated by using overoxidized polypyrrole-modified BDDMF electrodes, which also increased the sensitivity for the detection of dopamine. The limit of detection (S/N = 3) for dopamine was 0.1 nM, which is one order lower than that observed for carbon microfiber electrodes (CMFE), and the linear dynamic range was obtained from 0.5 nM to 100 microM (r2 = 0.997). The amperometric response for 0.5 nM dopamine has shown high stability with an RSD of 5.4% (n = 5). Highly reproducible results were obtained with an RSD of 6.2% for 10 measurements of 1 nM DA taken during 10 h and also remained the same, during measurements for 7 days, with no variation in efficiency for rejection of AA and DOPAC.

Cardiotonic Agents↗

Plasma electrochemistry: potential measured at boron doped diamond and platinum in gaseous electrolyte.

Premixed hydrogen/oxygen flame doped with ionisable alkali metals was considered as a dilute electrolyte. Two identical premixed flames which were in physical contact, served as a two compartment flame electrolyte cell. Five different electrochemical cells were studied, each containing a different combination of three alkali metals, Li, K and Cs. Pairs of boron doped diamond (BDD) and platinum electrodes were used to measure the overall zero current cell potential. The total potential measured across the cell was shown to be the sum of the mixed potential, dependent on the identity of ionised species present in the flame, and the diffusion potential originating at the junction between the two flames. Classical kinetic molecular theory and electrochemical theory of mixed potentials have been applied to account for the potential difference measured across these gas phase electrochemical cells. The relative merits of both models are discussed in the context of the experimental results obtained.

Boron↗

Localized electropolymerization on oxidized boron-doped diamond electrodes modified with pyrrolyl units.

This paper describes the functionalization of oxidized boron-doped diamond (BDD) electrodes with N-(3-trimethoxysilylpropyl)pyrrole (TMPP) and the influence of this layer on the electrochemical transfer kinetics as well as on the possibility of forming strongly adhesive polypyrrole films on the BDD interface through electropolymerization. Furthermore, localized polymer formation was achieved on the TMPP-modified BDD interface using the direct mode of a scanning electrochemical microscope (SECM) as well as an electrochemical scanning near-field optical microscope (E-SNOM). Depending on the method used polypyrrole dots with diameters in the range of 1-250 microm are electrogenerated.

Boron↗

Bone marrow failure in Shwachman-Diamond syndrome does not select for clonal haematopoiesis of the paroxysmal nocturnal haemoglobinuria phenotype.

Bone marrow failure is believed to be the underlying condition that drives the expansion of the paroxysmal nocturnal haemoglobinuria (PNH) clone. Indeed, circulating PNH blood cells have been identified in patients with acquired aplastic anaemia and with hypoplastic myelodysplasia. Whether PNH blood cells are also present in patients with inherited aplastic anaemia has not been reported. We screened a large group of patients diagnosed with Shwachman-Diamond Syndrome (SDS) for PNH blood cells. None of the patients analysed had detectable circulating PNH blood cells, indicating that bone marrow failure in SDS does not select for PNH progenitor cells.

Adolescent↗