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PubMed1979

Haemoglobin and erythrocytic glucose-6-phosphate dehydrogenase variants among selected tribes in Western Saudi Arabia.

638 subjects from six tribes in Western Saudi Arabia were tested for haemoglobin and G-6-PD variants. In the bedouins of Harbi and Sahafi tribes there was no sickling but a low frequency of both G-6-PD deficiency (1.7%) and the Gd A+ variant (1.7%) in Harbi. In Mograbi and Mowallad tribes who immigrated recently from Africa, the frequency of Hb S was 4.1 and 3.5%, G-6-PD deficiency 7.5 and 8.5% and the Gd A+ variant 15.1 and 8.5% respectively, which are higher than in bedouins. In Ghamid tribe 4% had Hb S and there was a low frequency of both G-6-PD deficiency (4.8%) and Gd A+ variant (1.6%). However a new B slow variant is common among the Ghamid (16.1%). Hb S frequency in Zahran tribe was 2.6%. Six of the 12 g-6-PD deficient (screening) were found to be positive on starch gel electrophoresis.

Erythrocytes↗
PubMed1981

The frequency of private electrophoretic variants and indirect estimates of mutation rate in scheduled tribes from South India.

Data on private electrophoretic variants for 18 Scheduled Tribe populations from south India have been utilized to estimate mutation rate by two indirect procedures. The values of mu for the total pooled data are 0.150 x 10(-6) and 0.264 x 10(-6)/locus per generation by the methods of Kimura and Ohta30 and Nei44 respectively. Three different groups of these tribes yield the unweighted average values of mu as 0.193 x 10(-6) and 0.410 x 10(-6)/locus per generation by the two methods given above. The estimates on individual populations, however, show a wide variability, even if only the non-zero results are considered. The unweighted average of these individual tribe estimates is an order of magnitude higher than the estimates obtained for the total populations of all the 18 tribes. The problems involved in estimating mutation rate from protein data using indirect methods in tribal populations of India are considerable because of their levels of detribalization and acculturation. The validity of the low values of mu in these tribes, in comparison with the much higher estimates for the populations from the other parts of the world, is discussed.

Electrophoresis↗
PubMedDate not supplied

Fertility and family planning among Jenu Kuruba and Kadu Kuruba tribes of Karnataka.

Fertility is higher among the Kadu Kuruba tribe than the Jenu Kuruba tribe. Women who married at the age of 12 years have higher fertility than the women who married at the age of 16 years. The differences between two tribes in terms of fertility levels in age group are large. The practice of induced abortions or spontaneous ones are common among them. Most of the women who terminate pregnancy either before or after marriage, use only indigenous medicines. Among the Jenu Kuruba tribe more women are using indigenous medicines for preventing pregnancies, while among the Kadu Kurubas more women are using modern methods of contraceptives. The women who are using indigenous medicines to prevent pregnancies have lower fertility.

Abortion, Induced↗
PubMed1995

Beta-globin gene cluster haplotype distribution in five Brazilian Indian tribes.

Haplotypes derived from five polymorphic restriction sites in the beta-globin gene cluster were investigated in 139 individuals from five different Brazilian Indian tribes by the polymerase chain reaction (PCR). Eight haplotypes were identified. Haplotypes 2 ((+)----) and 6 (-)++(-)+) were the most frequent and were common to all tribes. Their prevalences ranged from 60% to 93% and from 3% to 18%, respectively. Average heterozygosity measured by the Gini-Simpson index is markedly reduced among these Brazilian Indians when compared with Europeans (56%), but much less (8%) in relation to Asiatics, suggesting the absence of an important bottleneck effect in the early colonization of South America. The coefficient of gene differentiation (GST') was estimated as 0.082 among six Brazilian Indian tribes, but when only three Tupi-Mondé-speaking tribes were considered, this estimate was reduced to 0.030.

Base Sequence↗
PubMed1999

Phylogenetic placement and circumscription of tribes Inuleae s. str. and Plucheeae (Asteraceae): evidence from sequences of chloroplast gene ndhF.

DNA sequences from chloroplast gene ndhF were investigated in 15 species in tribes Inuleae Cass. s. str., Plucheeae (Benth.) A. Anderb., and Gnaphalieae Benth. (Asteraceae) and combined with 90 ndhF sequences from GenBank to evaluate the circumscription of the putative sister tribes Inuleae and Plucheeae. The data were subjected to phylogenetic analysis using parsimony jackknifing. The results are presented in a cladogram and discussed in comparison to previous analyses of both molecular and morphological data. The interpretations of specific diagnostic characters are also discussed. The majority of genera from Inuleae s. str. and Plucheeae comprise a monophyletic group, sister to the Heliantheae s. l. -Blepharispermum-Athroisma group. The genera of the Gnaphalieae belong to a different monophyletic group within the family that also includes tribes Anthemideae, Astereae, and Calenduleae. Within the Inuleae-Plucheeae complex, two well-supported subclades were identified, one corresponding to the Inuleae s. str. and the second to the Plucheeae. Three genera, Antiphiona, Pegolettia, and Geigeria, were outside of both tribes and were part of an unresolved polytomy at the base of the Inuleae-Plucheeae clade. Anisopappus, hitherto considered a member of Inuleae s. str., was found to be part of the Heliantheae-Athroisma-Blepharispermum clade. As discussed, the results of previous phylogenetic analyses, presenting Anisopappus as the basalmost taxon of Inuleae s. str., may be due to inadequate sampling.

Asteraceae↗
PubMed2000

Molecular phylogeny and biogeography of tribe anthemideae (Asteraceae), based on chloroplast gene ndhF.

Anthemideae (Asteraceae) is primarily a north temperate, Old World tribe of 109 genera and approximately 1740 species. We sequenced a 1200-bp portion of chloroplast gene ndhF for representative genera and subtribes and constructed a phylogeny for the tribe. There is support for monophyly of subtribes Chrysantheminae and Gonosperminae and for portions of some subtribes. However, our molecular phylogeny differs significantly from traditional classifications and from previously published morphological phylogenies of the tribe. Many South African genera from several different subtribes form a basal grade, indicating multiple, relictual lineages. Eurasian genera form a recently derived clade that includes the Mediterranean genera of the Iberian Peninsula and North Africa. There is little resolution or support for the placement of eastern Asian genera. Apparently, the tribe originated in the Southern Hemisphere, presumably in Africa, with the Eurasian and Mediterranean members being derived from a common ancestor.

Asteraceae↗
PubMed1977

Genetic studies of the Macushi and Wapishana Indians. II. Data on 12 genetic polymorphisms of the red cell and serum proteins: gene flor between the tribes.

Blood samples from 509 Macushi (3 villages) and 623 Wapishana (11 villages) of Northern Brasil and Southern Guyana have been analyzed with respect to the phenotype and gene frequencies at the following 12 polymorphic loci: ABO, Kell-Cellano, MNSs, Rh, P, Duffy, Kidd, Diego, Lewis, Group-specific component, and the immunoglobulin allotypes of the Gm and Inv systems. The data suggest that 5-6% of the Wapishana gene pool is derived from non-Indians but only 1-2% of the Macushi. Inter- and intratribal genetic distances between villages are calculated for these data in an effort to understand gene flow between the tribes and to account for the unusual distribution of a newly-discovered genetic polymorphism of erythrocyte esterase A thus far limited to these 2 tribes (Neel et al., 1977). The data are puzzling and consistent with the possibility that both the Carib-speaking Macushi and the Arawak-speaking Wapishana have derived the esterase A allele in question from some third group now extinct or thus far undiscovered. Intertribal genetic distances based on gene frequencies at 6 loci are derived for 20 Amerindian tribes (including these 2); the "central" position of these 2 tribes can in part be explained by the active migration matrix connecting them.

ABO Blood-Group System↗
PubMed1996

Effectiveness of a consultation intervention to promote tobacco control policies in Northwest Indian tribes: integrating experimental evaluation and service delivery.

A quasi-experimental replication of an intervention for promoting tobacco control policies in Northwest Indian tribes is described and the process of intervention including issues of collaboration among research institutions and Indian organizations is discussed. The policy intervention was evaluated using a pretest-posttest design wherein 20 tribes that had served as wait-list controls now received the intervention. The intervention comprised a tribal representative attending a kickoff orientation; follow-up visits to the tribes; distribution of tobacco policy workbooks; and phone call consultations. Policy status and stringency were assessed by means of telephone interviews with two key contacts per tribe, and by a count of enacted policies. There were significant pre-post changes in the primary outcome measure, a composite summary score of tobacco policy stringency, and changes were also reflected in enacted policies. The intervention effects observed were similar to those found in the prior randomized trial and suggest a robust, disseminable intervention. Much of the success achieved was attributed to the role of an Indian organization in planning the project and implementing the intervention and evaluation protocols.

Follow-Up Studies↗
PubMed2005

Structural and distributional variation of mitochondrial rps2 genes in the tribe Triticeae (Poaceae).

The mitochondrial rps2 gene from barley, like that of rice, wheat, and maize, has an extended open reading frame (ORF) at the 3'-region when compared to that from lower plants. However, the extended portions are variable among these cereals. Since barley and wheat belong to the same tribe (Triticeae), it would be interesting to know when and where the two types of rps2 were generated during evolution. To determine this, we utilized the mitochondrial (mt) DNA sequence to examine variations of the rps2 genes in the tribe Triticeae. By means of the variable 3'-region, the distribution of barley (B)-type and wheat (W)-type rps2 sequences was studied in 19 genera of the tribe. The B-type sequence was identified in 10 of the 19 genera, whereas the W-type sequence was present in all 19 genera. Thus, ten of the examined genera have both types of rps2 sequences due to the presence of two copies of the gene. The W-type sequence was also present in the tribe Bromeae and the B-type sequence was also found in Aveneae and Poeae. Phylogenetic trees based on the B-type and W-type sequences were different from those based on other molecular data. This suggests that the mitochondrial genome in Triticeae has a unique evolutionary history.

Amino Acid Sequence↗
PubMed2005

Evolutionary relationships of the limnochromini, a tribe of benthic deepwater cichlid fish endemic to Lake Tanganyika, East Africa.

Lake Tanganyika harbors an enormous diversity of cichlid fish that stem from eight distinct ancestral lineages, which colonized the lake after its formation 9 to 12 million years ago. Six of twelve currently described tribes are assigned to the "H-lineage," an assemblage of exclusively mouthbrood-ing cichlids, all of which evolved during a short period of time during the course of the primary radiation of lacustrine species. Our study focuses on the deepwater tribe Limnochromini, comprising bi-parental mouthbrooders, and is based on phylogenetic analysis of two mitochondrial gene segments. We confirm the polyphyletic origin of the Limnochromini as they are defined to date, in that Gnathochromis pfefferi is placed among the Tropheini, whereas the genus Benthochromis is presented as an independent lineage. The remaining nine species were unambiguously resolved as monophyletic and should be redefined as the tribe Limnochromini. Concerning generic assignments, the genus Greenwoodochromis appeared as monophyletic, Limnochromis as paraphyletic, and the genera Reganochromis and Baileychromis as monophyletic sister genera. The linearized tree analysis and the comparison of average sequence divergences to that of the remaining tribes of the H-lineage revealed a relatively recent but simultaneous proliferation of the Limnochromini, suggesting that the same environmental changes triggered the radiation of particular deepwater, benthic, pelagic, and littoral lineages. By using a preliminary calibration of a molecular clock based on gamma-corrected amino acid distances of the NADH2 gene, the diversification of the Limnochromini could tentatively be dated to 2.9-3.5 MYA, coinciding with a period of aridification in East Africa between 2.5 and 3 MYA. The lack of geographic color morphs and the structural uniformity and resource scarcity of deepwater habitats suggest that competition and resource partitioning leading to differential trophic specialization promoted speciation within the Limnochromini, rather than an allopatric model.

Animals↗
PubMed2005

Ancient divergence in bathypelagic lake tanganyika deepwater cichlids: mitochondrial phylogeny of the tribe bathybatini.

The cichlid species flock of Lake Tanganyika represents a polyphyletic assemblage of eight ancestral lineages, which colonized the emerging lake independently. Our study is focused on one of these lineages, the Bathybatini, a tribe of specialized piscivorous cichlids of the deep pelagic zone. By analyzing three mtDNA gene segments of all eight species of the tribe and two species of the closely related Trematocarini, we propose on the basis of a linearized tree analysis that the Bathybatini comprise two distinct lineages, the genera Hemibates and Bathybates, that seeded the primary lacustrine Tanganyika radiation independently. The genus Hemibates is likely to represent a distinct lineage that emerged simultaneously with the tribe Trematocarini and the genus Bathybates and should be therefore treated as a distinct tribe. Within the genus Bathybates, B. minor clearly represents the most ancestral split and is likely to have diverged from the remaining species in the course of the "primary lacustrine Tanganyika radiation" during which also the radiations of the Lamprologini and the H-lineage took place. The remaining "large" Bathybates species also diversified almost simultaneously and in step with the diversification of other Tanganyikan lineages-the Limnochromini and Cyprichromini-with B. graueri occupying the most ancestral branch, suggesting that these were induced by the same environmental changes. The lack of geographic color morphs suggests that competition and resource partitioning, rather than allopatric speciation, promoted speciation within the genus Bathybates.

Animals↗
PubMedDate not supplied

Kala-azar in western Upper Nile province in the southern Sudan and its spread to a nomadic tribe from the north.

Since the start in 1988 of the present epidemic of kala-azar (visceral leishmaniasis) in western Upper Nile state in southern Sudan, the epidemiology of the disease in all parts of the Sudan where kala-azar has been reported was reassessed by the Leishmaniasis Research Group in Khartoum. In this paper, the spread of the epidemic is described among a nomadic tribe originating from southern Kordofan state, who migrate every year with their cattle to the Bentiu area in western Upper Nile state where the epidemic is still raging. 200 cases from this tribe were seen in Khartoum; another 56 cases were found during a field trip to the area. In addition, the Bentiu area was visited, where 301 cases were under treatment and another 52 of 1120 individuals screened were confirmed parasitologically. 20 cases of post-kala-azar dermal leishmaniasis were found. Parasites isolated from the nomadic tribe were of the same zymodeme as parasites isolated previously from the Nuer in western Upper Nile. The epidemiological findings in each state are discussed in relation to the tribes that were affected and the ecology of the area.

Adolescent↗
PubMed1989

Differential alcohol-related mortality among American Indian tribes in Oklahoma, 1968-1978.

Tribal differences in alcohol-related mortality were examined among 11 Indian tribes living in Oklahoma. Data on alcohol-related deaths from 1968 to 1978 were compiled and assigned to various tribes on the basis of population distributions by county. Results showed significant differences in alcohol-related mortality among the various tribes. Of the 267,238 total deaths in Oklahoma during the study period, 9.3% of Indian deaths were alcohol-related while only 3.2% of those among blacks and 2.4% of those among whites were classified as such. Indian males and females are far more likely to die of alcohol-related deaths than their black and white counterparts. Cheyenne-Arapaho, Comanche and Kiowa areas (located in the western++ part of the state) have higher alcohol-related deaths than Cherokee, Choctaw, Creek, Seminole and Pawnee areas (located in eastern Oklahoma). Indian residents of the Seminole area have the lowest percentage of deaths identified as alcohol-related. The patterns which emerge may be due to different cultural and historical factors among the Indian tribes.

Adult↗
PubMed2000

Molecular phylogenetic study of the tribe Trypetini (Diptera: Tephritidae), using mitochondrial 16S ribosomal DNA sequences.

Monophyly and intratribal relationships of the tribe Trypetini were tested using mitochondrial 16S ribosomal RNA gene from 16 species of Trypetini, six tephritid outgroups, and two non-tephritid outgroups. The number of aligned sites was 1279 bp, but 1165 bp were used for analysis after excluding sites with missing data or gaps. Among these 1165 sites, 447 sites were variable and 305 were informative for parsimony analysis. Phylogenetic information was extracted from this data set using neighbor-joining and maximum parsimony methods and compared to a phylogenetic hypothesis proposed from the morphological literature. My molecular data suggest: (1) monophyly of the tribe Trypetini; (2) monophyly of the Chetostoma group; (3) monophyly of the Trypeta group; and (4) non-monophyletic nature of the previous concept of Hemilea. I suggest that more sensitive genetic markers with less A+T bias are needed to bring about finer resolution within the tribe Trypetini, and additional tephritid lineages should be sampled to identify the sister-group relationship of the tribe Trypetini.

Journal Article↗
PubMed2003

Adverse childhood exposures and alcohol dependence among seven Native American tribes.

BACKGROUND: Alcohol abuse and alcoholism are leading causes of death among Native Americans. Little is known about the impact of negative childhood exposures, including parental alcoholism, childhood maltreatment, and out-of-home placement, on risk of lifetime DSM-IV (Diagnostic and Statistical Manual of Mental Disorders, 4th edition) diagnosis of alcohol dependence in this population. METHODS: Face-to-face interviews were conducted with 1660 individuals from seven Native American tribes from 1998 to 2001. Logistic regression was used to estimate the impact of specific types and number of different adverse childhood experiences on alcohol dependence. Relationships between tribe-specific cultural characteristics and alcohol dependence were also examined. RESULTS: There were significant tribal differences in rates of alcohol dependence and several adverse childhood exposures. Lifetime prevalence of alcohol dependence was high among all tribes (men: 21%-56%, women: 17%-30%), but one (men: 1%, women: 2%). High prevalence rates were documented for one or more types of adverse childhood experiences (men: 74%-100%; women: 83%-93%). For men, combined physical and sexual abuse significantly increased the likelihood of subsequent alcohol dependence (odds ratio [OR]=1.58; 95% confidence interval [CI], 1.10-2.27). For women, sexual abuse (OR=1.79; 95% CI, 1.21-2.66) and boarding school attendance increased the odds of alcohol dependence (OR=1.57; 95% CI, 1.03-2.40). Two separate patterns of dose-response relationships were observed for men and women. Significant inter-tribal differences in rates of alcohol dependence remained after accounting for tribe-specific cultural factors and geographic region. CONCLUSIONS: Effects of childhood exposures on high-risk behaviors emphasize screening for violence in medical settings and development of social and educational programs for parents and children living on and near tribal reservations.

Adult↗
PubMed1998

The JC and BK human polyoma viruses appear to be recent introductions to some South American Indian tribes: there is no serological evidence of cross-reactivity with the simian polyoma virus SV40.

In an effort to understand the unusual cytogenetic damage earlier encountered in the Yanomama Indians, plasma samples from 425 Amerindians representing 14 tribes have been tested for hemagglutination inhibition antibodies to the human JC polyoma virus and from 369 Amerinds from 13 tribes for hemagglutination inhibition antibodies to the human BK polyoma virus. There is for both viruses highly significant heterogeneity between tribes for the prevalence of serum antibody titers >/=1/40, the pattern of infection suggesting that these two viruses only relatively recently have been introduced into some of these tribes. Some of these samples, from populations with no known exposure to the simian polyoma virus SV40, also were tested for antibodies to this virus by using an immunospot assay. In contrast to the findings of Brown et al. (Brown, P., Tsai, T. & Gajdusek, D. C. (1975) Am. J. Epidemiol. 102, 331-340), none of the samples was found to possess antibodies to SV40. In addition, no significant titers to SV40 were found in a sample of 97 Japanese adults, many of whom had been found to exhibit elevated titers to the JC and BK viruses. This study thus suggests that these human sera contain significant antibody titers to the human polyoma viruses JC and BK but do not appear to contain either cross-reactive antibodies to SV40 or primary antibodies resulting from SV40 infection.

Adult↗
PubMed2003

Hepatitis B virus: predominance of genotype D in primitive tribes of the Andaman and Nicobar islands, India (1989-1999).

To understand the possible origin of hepatitis B virus (HBV), three of the four hyperendemic, primitive accessible tribes of the Andaman and Nicobar islands, India, were investigated. The Nicobarese tribe was investigated in 1989 and 1999. The S gene from 65 HBV isolates was amplified by PCR and sequenced. Genotyping and serotyping were carried out on the basis of phylogenetic and amino acid analyses of S gene. All 20 Nicobarese-89 isolates, nine Onges-99 isolates and the single Andamanese-99 HBV isolate were classified as genotype D. Of the Nicobarese-99 isolates, 32 (91.4 %) and three (8.6 %) were genotypes D and A, respectively. Per cent nucleotide identity between the S sequences representing different tribes varied from 98.06 to 98.59 % and varied from mainland isolates by 1.6-2.0 %. Although southeast Asian origin is postulated for the Nicobarese tribe, the presence of different genotypes suggests introduction of HBV after migration to these islands, probably from mainland India, 200 years back, when these islands became inhabited as a part of penal settlement during the British regimen.

Amino Acid Sequence↗
PubMed2005

The Duffy blood groups of Jarawas - the primitive and vanishing tribe of Andaman and Nicobar Islands of India.

Andaman and Nicobar Islands, union territory of India were inhabited by 14 aboriginal tribes. Some of these tribal populations have already become extinct, and the numbers of the existing ones are also dwindling. This group of islands being highly endemic for malaria, it was considered worthwhile to study the hunter-gatherer primitive tribe, Jarawas, for their Duffy blood group phenotype. Jarawas, the primitive tribe of Andaman Islands, inhabit the three jungle areas of South and one jungle area of Middle Andaman. Blood samples of 116 Jarawas were collected and tested for Duffy blood group and malarial parasite infectivity. The Duffy blood grouping was performed as per standard serological techniques, and peripheral smears were screened for malarial parasite and if present parasite density count was performed and the species identified. The results showed a total absence of both Fy(a) and Fy(b) antigens in two areas (Kadamtala and R.K. Nallah) and low prevalence of Fy(a) antigen in another two areas (Jirkatang and Tirur). There was absence of malarial parasite Plasmodium vivax infection though Plasmodium falciparum infection was present in 27.59% of cases. A very high frequency of Fy (a-b-) in the Jarawa tribe from all the four jungle areas of Andaman Islands along with total absence of P. vivax infections suggests the selective advantage offered to Fy (a-b-) individuals against P vivax infection.

Duffy Blood-Group System↗