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PubMed2001

Southern Mexican minnows of the genus Notropis (Actinopterygii, Cyprinidae): genetic variation, phylogenetic relationships and biogeographical implications.

Allozyme analyses were performed to determine patterns of genetic variation and phylogenetic relationships within the genus Notropis in southern Mexico. Products of 28 gene loci were resolved in 24 geographic samples belonging to four putative species. These species represent the southern limit of the Cyprinidae in North America. Five loci were found monomorphic and 11 were diagnostic among species when the outgroup, Phoxinus phoxinus, was not taken into account. Four groups were identified, but these do not correspond perfectly to the four nominal species. Notropis sallaei was identified by allozyme analyses being the most basal among southern Mexican Notropis and the most genetically divergent. Notropis imeldae, was also diagnosed on the basis of allozymic variation, however a population sample representing the Balsas drainage was genetically divergent and is considered as an undescribed new species (N. n. sp.). No genetic differences were found between the samples of N. boucardi and N. moralesi. Therefore, we recommend that N. moralesi should be considered as a junior synonym of N. boucardi. A broad geographic sampling strategy was employed across all the distribution range of N. boucardi representing rivers from three different drainages, which cover both Mexican slopes. The slight divergence found among the headwater populations of N. boucardi permitted us to predict a model of paleohydrographic relationships of these three drainages. Two alternative hypotheses are postulated to explain the current distribution pattern of populations of N. boucardi in southern Mexico.

Journal Article↗
PubMed2002

Cloning and sequences of beta-actin genes from Rhodeus notatus and the silver carp Hypophthalmichthys molitrix (cyprinidae) and the phylogeny of Cyprinid fishes inferred from beta-actin genes.

Complete beta-actin genes from Rhodeus notatus and Hypophthalmichthys molitrix (silver carp) were amplified by polymerase chain reaction and cloned into pCRII vector for further characterization. The beta-actin genes of these two fishes were 1718 and 1755 bp in sequence length, respectively, and both of them contained 5 exons and 4 introns. The exon and intron boundaries were identified with the GT/AG rule. The phylogenetic implications of beta-actin gene in the family Cyprinidae were shortly discussed.

Actins↗
PubMed2023

The complete mitogenome of Paratanakia chii (Cypriniformes; Cyprinidae).

Paratanakia chii is a bitterling fish of the genus Paratanakia, subfamily Acheilognathinae and family Cyprinidae. The mitochondrial DNA sequence of P. chii is reported in this paper. The complete mitochondrial genome of P. chii is 16,575 bp in length, including 13 protein-coding genes (PCGs), 2 rRNA genes, 22 tRNA genes, and 1 displacement loop (D-loop). The genome sequence is consistent with those of most other carp. The majority of PCGs have AT- (Met) start codons and TA- end codons. The A + T contents of the genome, PCGs, transfer RNAs (tRNAs), and ribosomal RNAs (rRNAs) are 56.92%, 58.07%, 56.34%, and 54.21%, respectively. Phylogenetic analysis showed that P. chii is most closely related to Tanankia himantegus. These data will benefit relative ecological and phylogenetic studies.

Acheilognathinae↗
PubMed1994

THE RELATIONSHIP BETWEEN THE LENGTH OF THE CUPULAE OF FREE NEUROMASTS AND FEEDING ABILITY IN LARVAE OF THE WILLOW SHINER GNATHOPOGON ELONGATUS CAERULESCENS (TELEOSTEI, CYPRINIDAE)

Free mechanosensory neuromasts of larval fishes have been described as playing a complementary role to vision in feeding behaviour (Disler, 1971; Iwai, 1972a,b). In certain species or under limited conditions, free neuromasts play a major role in detecting prey. The larvae of mottled sculpin Cottus bairdi can feed on Artemia in the dark by using free neuromasts (Jones and Janssen, 1992). Artificially blinded surface-feeding Aplocheilus lineatus can detect insects on the water surface by means of free neuromasts (Muller and Schwarts, 1982; Tittel et al. 1984; Bleckmann, 1988; Bleckmann et al. 1989). Furthermore, vibrations produced by swimming crustaceans are known to be a potent natural stimulus for the lateral line system in the Antarctic fish Pagothenia borchgrevinki (Montgomery and Macdonald, 1987; Montgomery, 1989). We found that larvae of a plankton feeder, the willow shiner Gnathopogon elongatus caerulescens (Sauvage) (Cypriniformes, Cyprinidae), fed on nauplii of Artemia in complete darkness. Ototoxic compounds, such as streptomycin, have been shown to disturb the function of the lateral line organ or free neuromasts (Kaus, 1987; Blaxter and Fuiman, 1989; Janssen, 1990; Jones and Janssen, 1992). Willow shiner larvae treated with streptomycin sulphate no longer feed on Artemia in the dark (Y. Mukai, in preparation). The willow shiner inhabits calm lakes and feeds on zooplanktonic prey (Nakamura, 1949). The larvae show a high sensitivity to minute water displacements. From these observations and from our findings, it appears that larval willow shiner must feed on zooplankton by using free neuromasts in the dark. In larval willow shiner, the vane-like cupulae of the free neuromasts protrude from the body surface and the long cupulae are 100-250 microm in length (Mukai and Kobayashi, 1991). The prey is detected by the free neuromasts as a result of a slight bending of the cupula in response to local water movements. The shape of the cupula, especially its length, must therefore be related to the sensitivity of the free neuromast, as inferred from the results of Coombs and Janssen (1989) and van Netten and Kroese (1989).

Journal Article↗
PubMed2002

Immunohistochemical study of the endocrine cells in the pancreas of the carp, Cyprinus carpio (Cyprinidae).

The regional distribution and relative frequency of some endocrine cells in the pancreas of the carp, Cyprinus carpio Linnaeus, belonging to the family Cyprinidae in the order Cypriniformes, were observed using specific mammalian antisera against insulin, glucagon, somatostatin and human pancreatic polypeptide (hPP) by peroxidase antiperoxidase (PAP) method. The pancreas was divided into four regions (principal and secondary islets, exocrine and pancreatic duct regions). In addition, the pancreatic islet regions were further subdivided into three regions (central, mantle and peripheral regions) and the pancreatic duct regions were subdivided into two regions (epithelial and subepithelial regions). Spherical to spindle or occasionally round to oval shaped immunoreactive (IR) cells were demonstrated in the pancreatic islets, exocrine and pancreatic duct. In the principal islet regions, some cells were also detected in the other regions, most of insulin- and somatostatin-IR cells were located in the central regions, and glucagon- and hPP-IR cells were situated in the peripheral regions. In this regions, insulin-IR cells were most predominant cell types and then, glucagon, somatostatin and hPP in that order. In the secondary islet regions, the regional distribution and relative frequency of these four types of endocrine cells were quite similar to those of the principal islets except for cell clusters consisted of hPP-IR cells that were situated in the peripheral to mantle regions. In the pancreatic duct regions, all four major pancreatic endocrine cells were demonstrated in the inter-epithelial cells and/or basal regions of the epithelial linning. In addition, cell clusters composed of numerous insulin-, moderate glucagon- and somatostatin-IR cells of low frequency were also observed in the subepithelial regions of the pancreatic duct. In the exocrine regions, insulin-, glucagon-, somatostatin- and hPP-IR cells were located in the inter-acinus regions with rare, a few, moderate and moderate frequencies, respectively. In conclusion, the regional distribution and relative frequency of four major pancreatic endocrine cells, insulin-, glucagon-, somatostatin- and hPP-IR cells, in the pancreas of the carp showed general patterns which were observed in other stomachless teleost. However, some species- dependent different distributional patterns and/or relative frequencies were also demonstrated.

Animals↗
PubMed2004

Simultaneous production of triploid and haploid eggs by triploid Squalius alburnoides (Teleostei: Cyprinidae).

The hybrid minnow Squalius alburnoides comprises diploid and polyploid forms with altered modes of reproduction. In the present paper, we report a cross where a triploid female generated both large, triploid and small, haploid eggs simultaneously, which were fertilized with S. pyrenaicus sperm. Although the large eggs were rarer (15%), they originated offspring with higher survivorship, so that tetraploids were dominant among the surviving siblings. The cross yielded apparently all female progeny. Inheritance patterns were inferred using four microsatellite markers and NORs (Nucleolus Organizer Regions) phenotypes, and suggested that haploid eggs were probably produced by an atypical hybridogenesis, in which the elimination of the unmatched genome permitted random segregation and recombination between the homospecific genomes, while the triploid eggs were clonal. The present results suggest that the occurrence of triploid unreduced eggs may be a new route for the natural tetraploidization in the complex.

Animals↗
PubMed1993

Seasonal changes in plasma levels of steroid hormones in an asynchronous fish the gudgeon Gobio gobio L. (Teleostei, Cyprinidae).

Annual changes in plasma of estradiol-17 beta, testosterone, and 17,20 beta-dihydroxy-4-pregnen-3-one concentrations were measured, by radioimmunoassay, in female gudgeon Gobio gobio a fish which has an asynchronous-type ovary containing oocytes at various stages of development and spawns several times during the reproductive period. The gonadosomatic index and the relation between stages of maturity and steroid concentrations were also followed during the reproductive cycle. Plasma levels of estradiol-17 beta, testosterone, and 17,20 beta-dihydroxy-4-pregnen-3-one were low from October to April and increased rapidly in May to reach 0.61 +/- 0.31; 2.3 +/- 0.42; and 3.17 +/- 0.68 ng/ml, respectively. Elevated levels were maintained during spawning when vitellogenic oocytes are present alongside oocytes in final maturation. Histological analysis of the ovary indicated that an important number of spawnings has occurred since the proportion of oocytes in final maturation stage was very low (less than 1%). Fish in the regressive phase also presented high steroid levels. The vitellogenic oocytes in preovulatory atresia and the postovulatory follicles may be responsible for these events.

Animals↗
PubMed1993

A molecular perspective on the phylogenetic relationships of the barbeled minnows, historically assigned to the genus Hybopsis (Cyprinidae: Cypriniformes).

Allozyme products of 32 gene loci were compared for the North American cyprinid fishes Campostoma oligolepis, Cyprinella galactura, Cyprinella monacha, Erimystax cahni, E. dissimilis, E. insignis, E. x-punctatus, Hybopsis amblops, H. labrosa, H. rubriforns, H. zanema, Macrhybopsis aestivalis, M. gelida, M. meeki, Nocomis biguttatus, Phenacobius uranops, Platygobio gracilis, and P. storeriana. Triose-phosphate isomerase was found to be duplicated in all species examined. Parsimony analysis revealed that Hybopsis sensu lato did not form a monophyletic group. Cyprinella monacha was found to be the sister species to members of the genus Cyprinella and was excluded from the genus Erimystax. A clade of four species of Erimystax was identified although relationships among the four species could not be resolved. Phenacobius was identified as the sister group to Erimystax. The genus Macrhybopsis was expanded to include M. aestivalis. Macrhybopsis gelida was identified as the sister to M. meeki and M. aestivalis as the sister to the former two species. The genus Platygobio was expanded to include P. storeriana. Hybopsis labrosa and H. zanema were found to be more closely related to members of the genus Hybopsis sensu stricto than to members of Cyprinella.

Animals↗
PubMed1998

Phylogenetic relationships of the western North American phoxinins (Actinopterygii: Cyprinidae) as inferred from mitochondrial 12S and 16S ribosomal RNA sequences.

Parsimony analysis of the mitochondrial 12S and 16S rRNA sequences of North American phoxinin taxa indicated the existence of three major clades, the Western Clade, the Creek Chub Clade, and the Open Posterior Myodome Clade. The monophyletic Western Clade identified in this paper contained fewer taxa than that identified by previous authors. This clade contained species restricted to drainages west of the Continental Divide, such as Gila, Acrocheilus, Relictus, Eremichthys, Siphateles, Ptychocheilus, Lavinia, and Orthodon, and the wide-ranging genus Phoxinus found in eastern North America and Eurasia. Within this Western Clade Phoxinus was the basal sister group. Gila was recognized as a monophyletic group exclusive of Siphateles and Snyderichthys, clades traditionally recognized as subgenera of Gila. The genus Gila was most closely related to the genus Acrocheilus and together these formed the sister group to the genus Relictus. These relationships were supported independent of weighting schemes used in analyses. Identification of Phoxinus as the basal sister taxon of the Western clade implies that other major clades of North American Phoxinins likely have Asian or European relatives.

Animals↗
PubMed1999

Phylogenetic relationships of Greek cyprinidae: molecular evidence for at least two origins of the Greek cyprinid fauna.

A phylogeny of the main cyprinid species that live in Greece was based on the complete mitochondrial cytochrome b gene (1140 bp). The great diversity of the Greek cyprinid fauna, with at least 4 different lineages of barbins, 1 of gobionins, and 10 of leuciscinids, was confirmed. The validity and composition of the genera Tropidophoxinellus and Pachychilon were demonstrated. Likewise, the close phylogenetic relationships of genera Vimba, Blicca, and Abramis, as well as Telestes, Chondrostoma, and Phoxinellus, were established. Moreover, Pseudophoxinus beoticus was found to be closely related to Phoxinellus rather than to other Pseudophoxinus species. The most interesting outcome of our analyses was the existence of at least two different origins of the Greek cyprinid fauna. Most of the Greek cyprinids were directly related to the Danubian (i.e., central European) ichthyofauna. However, we found at least four cases of a close phylogenetic relationship between Greek and Iberian endemic species.

Animals↗
PubMed1999

Nested clade and phylogeographic analyses of the chub, Leuciscus cephalus (Teleostei, cyprinidae), in Greece: implications for Balkan Peninsula biogeography.

Phylogenetic relationships among Greek populations of the chub, Leuciscus cephalus, were investigated using 600 bp of the cytochrome b gene. The aim of this study was to test the assumption that the main difference in ichthyological composition between both sides of the Balkan Peninsula is directly linked to differences in the dispersion mechanisms used by fish in order to extend their distribution range. Phylogenetic and nested clade analyses clearly showed that populations in Greece are significantly differentiated. Greek populations were found to descend from three lineages in three geographical provinces: Western, Central, and Eastern Greece. The chub reached Western Greece at the beginning of the Pleistocene and Eastern Greece during the mid-Pleistocene. Chub dispersion occurred mainly by river confluence due to sea level lowering and river capture in Western Greece and sea dispersal with low-salinity conditions within the Aegean Sea in Eastern Greece. However, in Central Greece, the original mtDNA lineage has presumably been lost owing to a genetic introgression following a second invasion from the Danube during the final stage of the last glaciation. This study provides new elements for a better understanding of the composition of the contemporary ichthyofauna in Greece and highlights possible evolutionary mechanisms responsible for the high endemism rate in the Western Greek biogeographic province.

Animals↗
PubMed2000

Molecular phylogeny of north mediterranean freshwater barbs (genus Barbus: cyprinidae) inferred from cytochrome b sequences: biogeographic and systematic implications.

We investigated phylogenetic relationships among north Mediterranean species of the genus Barbus using sequences of the cytochrome b gene. Our results indicate that the species belong to two major clades that are consistent with those previously defined from morphological features. The first clade includes species ranging from France to the Black Sea. In this clade, there is a well-supported monophyletic group of large-sized fluvio-lacustrine barbs; however, the monophyly of the small-sized rheophilic species is not clear. The second clade comprises species found in Spain, Greece, and Asia Minor and probably represents the oldest group present in the north Mediterranean rivers. In general, there is good concordance between geography and phylogenetic relationships. These results are compared to those from previous morphological- and allozyme-based studies and demonstrate widespread discordance and polyphyly in the traditional taxonomy of the genus Barbus. This study is one of the first reporting the phylogenetic and biogeographic relationships of a genus that is widely distributed in European rivers and contains species that are a major component of the European ichthyofauna.

Animals↗
PubMed2001

Molecular systematics of Xenocyprinae (teleostei: cyprinidae): taxonomy, biogeography, and coevolution of a special group restricted in East Asia.

We surveyed mitochondrial DNA (mtDNA) sequence variation in the subfamily Xenocyprinae from China and used these data to estimate intraspecific, interspecific, and intergeneric phylogeny and assess biogeographic scenarios underlying the geographic structure of lineages. We sequenced 1140 bp of cytochrome b from 30 individuals of Xenocyprinae and one putative outgroup (Myxocypris asiaticus) and also sequenced 297 bp of ND4L, 1380 bp of ND4, 68 bp of tRNA(His), and 69 bp of tRNA(Ser) from 17 individuals of Xenocyprinae and the outgroup (M. asiaticus). We detected high levels of nucleotide variation among populations, species, and genera. The phylogenetic analysis suggested that Distoechodon hupeinensis might be transferred to the genus Xenocypris, the taxonomic status of the genus Plagiognathops might be preserved, and species of Xenocypris and Plagiognathops form a monophyletic group that is sister to the genus Distoechodon and Pseudobrama. The introgressive hybridization might occur among the populations of X. argentea and X. davidi, causing the two species to not be separated by mtDNA patterns according to their species identification, and the process and direction of hybridization are discussed. The spatial distributions of mtDNA lineages among populations of Xenocypris were compatible with the major geographic region, which indicated that the relationship between Hubei + Hunan and Fujian is closer than that between Hubei + Hunan and Sichuan. From a perspective of parasite investigation, our data suggested that the fauna of Hexamita in Xenocyprinae could be used to infer the phylogeny of their hosts.

Animals↗
PubMed2002

Phylogeny and biogeography of the family Cyprinidae in the Middle East inferred from cytochrome b DNA- evolutionary significance of this region.

The phylogenetic relationships of cyprinid species from the Middle East and neighboring biogeographical areas were investigated using cytochrome b sequence variation in order to test hypotheses that consider the Middle Eastern area as an important interchange area or a center of speciation for the freshwater fauna. A total of 62 cyprinid species were analyzed over the complete cytochrome b fragment (1140 bp); 28 belong to the Leuciscinae subfamily and 34 to the Cyprininae. All the Leuciscinae lineage fish recorded in the Middle East are also found in Europe, which was interpreted as an important Palearctic influence in the Middle Eastern ichthyofauna consistent with the Lago Mare dispersion. However, it has also been suggested that several Danube species have their origins in the Middle East. In contrast, the Cyprininae subfamily showed three highly divergent lineages, one shared with the Euro-Mediterranean area (Barbus/Luciobarbus genus) relict of the Lago Mare dispersion, one shared with Africa (Carasobarbus/Varicorhinus subgenus), and the third shared with Asia (Garra genus). Furthermore, clades observed in the phylogenetic reconstructions are not consistent with morphometric or karyological data and disagree with previous taxonomic assumptions. Lastly, the dispersion history in the Middle East of this subfamily appears much more complicated and ancient than that of the Leuciscinae. However, taking into account Cyprininae and Leuciscinae distribution, the Middle East appears more like an important interchange area for the freshwater ichtyofauna than a center of speciation.

Animals↗
PubMed1987

A thermal denaturation study of genomic DNAs from North American minnows (Cyprinidae: Teleostei).

Base compositions and differential melting rate profiles of genomic DNAs from twenty species of North American cyprinid fishes were generated via thermal denaturation. Base pair composition expressed as % GC values ranged among the twenty species from 36.1-41.3%. This range is considerably broader than that observed at comparable taxonomic levels in other vertebrate groups. Both the range and average difference in base pair composition between species in the diverse and rapidly evolving genus Notropis were considerably greater than those between species in other North American cyprinid genera. This may indicate that genomic changes at the level of base pair composition are frequent and possibly important events in cyprinid evolution. Compositional heterogeneity and asymmetry values among the twenty species were uniform and low, respectively, suggesting that most of the species lacked DNA components in their genomes which differed substantially from their main-band DNAs in base pair composition. The melting rate profiles revealed a prominent and distinct heavy or GC-rich DNA component in the genomes of three species belonging to the subgenus Cyprinella of Notropis. These and other data suggest that the heavy melting component may reflect a large, comparatively GC-rich family of highly repeated or satellite DNA sequences common to all three genomes.

Animals↗