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PubMed2005

The role of phosphorus in chemical evolution.

In this tutorial review we consider the role of phosphorus and its compounds within the context of chemical evolution in galaxies. Following an interdisciplinary approach we first discuss the position of P among the main biogenic elements by considering its relevance in most essential biochemical functions as well as its peculiar chemistry under different physicochemical conditions. Then we review the phosphorus distribution in different cosmic sites, such as terrestrial planets, interplanetary dust particles, cometary dust, planetary atmospheres and the interstellar medium (ISM). In this way we realize that this element is both scarce and ubiquitous in the universe. These features can be related to the complex nucleosynthesis of P nuclide in the cores of massive stars under explosive conditions favouring a wide distribution of this element through the ISM, where it would be ready to react with other available atoms. A general tendency towards more oxidized phosphorus compounds is clearly appreciated as chemical evolution proceeds from circumstellar and ISM materials to protoplanetary and planetary condensed matter phases. To conclude we discuss some possible routes allowing for the incorporation of phosphorus compounds of prebiotic interest during the earlier stages of solar system formation.

Cosmic Dust↗
PubMed2006

Hydrogen cyanide polymers, comets and the origin of life.

Hydrogen cyanide polymers--heterogeneous solids ranging in colour from yellow to orange to brown to black--could be major components of the dark matter observed on many bodies of the outer solar system including asteroids, moons, planets and, especially, comets. The presence on cometary nuclei of frozen volatiles such as methane, ammonia and water subjected to high energy sources makes them attractive sites for the ready formation and condensed-phase polymerization of hydrogen cyanide. This could account for the dark crust observed on Comet Halley in 1986 by the Vega and Giotto missions. Dust emanating from its nucleus would arise partly from HCN polymers as suggested by the Giotto detection of free hydrogen cyanide, CN radicals, solid particles consisting only of H, C and N, or only of H, C, N, O, and nitrogen-containing organic compounds. Further evidence for cometary HCN polymers could be expected from in situ analysis of the ejected material from Comet Tempel 1 after collision with the impactor probe from the two-stage Deep Impact mission on July 4, 2005. Even more revealing will be actual samples of dust collected from the coma of Comet Wild 2 by the Stardust mission, due to return to Earth in January 2006 for analyses which we have predicted will detect these polymers and related compounds. In situ results have already shown that nitriles and polymers of hydrogen cyanide are probable components of the cometary dust that struck the Cometary and Interstellar Dust Analyzer of the Stardust spacecraft as it approached Comet Wild 2 on January 2, 2004. Preliminary evidence (January 2005) obtained by the Huygens probe of the ongoing Cassini-Huygens mission to Saturn and its satellites indicates the presence of nitrogen-containing organic compounds in the refractory organic cores of the aerosols that give rise to the orange haze high in the atmosphere of Titan, Saturn's largest moon. Our continuing investigations suggest that HCN polymers are basically of two types: ladder structures with conjugated -C=N- bonds and polyamidines readily converted by water to polypeptides. Thermochemolysis GC-MS studies show that cleavage products of the polymer include alpha-amino acids, nitrogen heterocycles such as purines and pyrimidines, and provide evidence for peptide linkages. Hydrogen cyanide polymers are a plausible link between cosmochemistry and the origin of informational macromolecules. Implications for prebiotic chemistry are profound. Following persistent bolide bombardment, primitive Earth may have been covered by water and carbonaceous compounds, particularly HCN polymers which would have supplied essential components for establishing protein/nucleic acid life.

Cosmic Dust↗
PubMed2006

Separation of samarium and neodymium: a prerequisite for getting signals from nuclear synthesis.

(146)Sm (T(1/2) = 10(8) y) is a long-lived radionuclide which has been produced in significant amounts during burning in a supernova (SN). Detection of this SN produced long-lived radionuclide on Earth may be helpful for getting information on nuclear synthesis at the time of our solar system's formation. Only accelerator mass spectrometry (AMS) can determine such minute traces of (146)Sm still expected in the Earth's crust. However, the villain of (146)Sm measurement through AMS is its naturally occurring stable isobar (146)Nd which is a million times more abundant than the trace amount of (146)Sm. Therefore an efficient method for the separation of samarium and neodymium is required to measure (146)Sm through AMS. A simple liquid-liquid extraction (LLX) based method for separation of samarium and neodymium has been developed using radiometric simulation. Di-(2-ethylhexyl)phosphoric acid (HDEHP) has been used as the organic reagent. A very high separation factor ( approximately 10(6)) can be achieved when a solution containing samarium and neodymium is reduced by hydroxylamine hydrochloride followed by extraction with 0.1% HDEHP diluted in cyclohexane from 0.025 M HCl solution.

Journal Article↗
PubMed1994

Rossby solitary vortices, on giant planets and in the laboratory.

This is a review of laboratory experiments with a layer of shallow water having a free surface and rotating together with a vessel of parabolic form. Such a (rather original) setup has allowed one to create Rossby solitary vortex for the first time. The latter is an anticyclonic Rossby vortex not subjected to dispersive spread owing to its compensation by the nonlinearity of KdV type. By its structural, collisional, and other properties, including clear-cut cyclonic-anticyclonic asymmetry, it may be considered as a physical prototype of the large-scale long-lived anticyclonic Rossby vortices like the Great Red Spot of Jupiter or the Great Dark Spot of Neptune (this remarkable vortex was discovered by the spacecraft Voyager-2 during its farewell to the Solar System) and other vortices dominating in the atmospheres of giant planets and created by the unstable zonal flows. It has been shown that the vortex under study is a long-lived entity provided it satisfies "antitwisting condition," i.e., it has rather large amplitude (at which it rotates more quickly than it propagates and thereby carries the trapped fluid). In this case, it is not subjected to the "twisting" deformation and may be ascribed by the generalized Charney-Obukhov equation for Rossby vortices on shallow water with a free surface. The results of creating the vortex under consideration by the different methods have been compared with the results obtained by other authors in the experiments on shear-flow generation of Rossby vortices.

Journal Article↗
PubMed2006

Interferometric observations of large biologically interesting interstellar and cometary molecules.

Interferometric observations of high-mass regions in interstellar molecular clouds have revealed hot molecular cores that have substantial column densities of large, partly hydrogen-saturated molecules. Many of these molecules are of interest to biology and thus are labeled "biomolecules." Because the clouds containing these molecules provide the material for star formation, they may provide insight into presolar nebular chemistry, and the biomolecules may provide information about the potential of the associated interstellar chemistry for seeding newly formed planets with prebiotic organic chemistry. In this overview, events are outlined that led to the current interferometric array observations. Clues that connect this interstellar hot core chemistry to the solar system can be found in the cometary detection of methyl formate and the interferometric maps of cometary methanol. Major obstacles to understanding hot core chemistry remain because chemical models are not well developed and interferometric observations have not been very sensitive. Differentiation in the molecular isomers glycolaldehdye, methyl formate, and acetic acid has been observed, but not explained. The extended source structure for certain sugars, aldehydes, and alcohols may require nonthermal formation mechanisms such as shock heating of grains. Major advances in understanding the formation chemistry of hot core species can come from observations with the next generation of sensitive, high-resolution arrays.

Astronomy↗
PubMed2001

Nondestructive, in situ, cellular-scale mapping of elemental abundances including organic carbon in permineralized fossils.

The electron microprobe allows elemental abundances to be mapped at the microm scale, but until now high resolution mapping of light elements has been challenging. Modifications of electron microprobe procedure permit fine-scale mapping of carbon. When applied to permineralized fossils, this technique allows simultaneous mapping of organic material, major matrix-forming elements, and trace elements with microm-scale resolution. The resulting data make it possible to test taphonomic hypotheses for the formation of anatomically preserved silicified fossils, including the role of trace elements in the initiation of silica precipitation and in the prevention of organic degradation. The technique allows one to understand the localization of preserved organic matter before undertaking destructive chemical analyses and, because it is nondestructive, offers a potentially important tool for astrobiological investigations of samples returned from Mars or other solar system bodies.

Carbon↗
PubMed2001

1998 SM165: a large Kuiper belt object with an irregular shape.

The recent discovery of an ancient reservoir of icy bodies at and beyond the orbit of Neptune-the Kuiper belt-has opened a new frontier in astronomy. Measurements of the physical and chemical nature of Kuiper belt objects (KBOs) can constrain our ideas of the processes of planet formation and evolution. Our 1.8-m Vatican Advanced Technology Telescope and charge-coupled device camera observations of the KBO 1998 SM(165) indicate its brightness periodically varies by 0.56 magnitudes over a 4-h interval. If we assume a uniform albedo of 0.04, which is typical of values found in the literature for a handful of KBOs, and an "equator-on" aspect, we find 1998 SM(165) has axes of length 600 x 360 km. If our assumptions are correct, such dimensions put 1998 SM(165) among the largest elongated objects known in our solar system. Perhaps long ago, two nearly spherical KBOs of comparable size coalesced to form a compound object, or perhaps 1998 SM(165) is the residual core of a catastrophic fragmentation of a larger precursor.

Journal Article↗
PubMed1975

Condensation time of the solar nebula from extinct I in primitive meteorites.

Mineral separates from five carbonaceous chondrites were dated by extinct 16 million year (129)I, in an attempt to establish the condensation time of the solar nebula. Two Fe(3)O(4) or Fe(3)O(4)-FeS samples from the Murchison and Orgueil meteorites are older than any other material dated thus far, and apparently formed within 2 x 10(5) years of each other. The great age, close isochronism, and primitive nature of the samples suggest that the event recorded was the condensation stage of the solar nebula. It provides a suitable zero point for the chronology of the early solar system. The (129)I/(127)I ratio during condensation of the nebula was (1.46 +/- 0.04) x 10(-4). The recrystallized C4 chondrite Karoonda began to retain (129)Xe 1.8 +/- 0.5 million years after the above event. This short cooling time implies rapid aceretion (</=1 million years) and a shallow origin (</=10 km) below the surface of its parent body.

Journal Article↗
PubMed1984

Periodicity of extinctions in the geologic past.

The temporal distribution of the major extinctions over the past 250 million years has been investigated statistically using various forms of time series analysis. The analyzed record is based on variation in extinction intensity for fossil families of marine vertebrates, invertebrates, and protozoans and contains 12 extinction events. The 12 events show a statistically significant periodicity (P less than 0.01) with a mean interval between events of 26 million years. Two of the events coincide with extinctions that have been previously linked to meteorite impacts (terminal Cretaceous and Late Eocene). Although the causes of the periodicity are unknown, it is possible that they are related to extraterrestrial forces (solar, solar system, or galactic).

Animals↗
PubMed1993

Scientific results from the Cosmic Background Explorer (COBE).

The National Aeronautics and Space Administration (NASA) has flown the COBE satellite to observe the Big Bang and the subsequent formation of galaxies and large-scale structure. Data from the Far-Infrared Absolute Spectrophotometer (FIRAS) show that the spectrum of the cosmic microwave background is that of a black body of temperature T = 2.73 +/- 0.06 K, with no deviation from a black-body spectrum greater than 0.25% of the peak brightness. The data from the Differential Microwave Radiometers (DMR) show statistically significant cosmic microwave background anisotropy, consistent with a scale-invariant primordial density fluctuation spectrum. Measurements from the Diffuse Infrared Background Experiment (DIRBE) provide new conservative upper limits to the cosmic infrared background. Extensive modeling of solar system and galactic infrared foregrounds is required for further improvement in the cosmic infrared background limits.

Journal Article↗
PubMed2005

Human liver proteome project: plan, progress, and perspectives.

The Human Liver Proteome Project is the first initiative of the human proteome project for human organs/tissues and aims at writing a modern Prometheus myth. Its global scientific objectives are to reveal the "solar system" of the human liver proteome, expression profiles, modification profiles, a protein linkage (protein-protein interaction) map, and a proteome localization map, and to define an ORFeome, physiome, and pathome. Since it was first proposed in April 2002, the Human Liver Proteome Project has attracted more than 100 laboratories from all over the world. In the ensuing 3 years, we set up a management infrastructure, identified reference laboratories, confirmed standard operating procedures, initiated international research collaborations, and finally achieved the first set of expression profile data.

Humans↗
PubMed1987

Radiogenic heating of comets by 26Al and implications for their time of formation.

The effect of radiogenic heating on the thermal evolution of spherical icy bodies with radii 1 km < R < 100 km was investigated. The radioisotopes considered were 26Al, 40K, 232Th, 235U, and 238U. Except for the 26Al abundance, which was varied, the other initial abundances were kept fixed, at values derived from those of chondritic meteorites and corresponding to a gas-to-dust ratio of 1. The initial models were homogeneous and isothermal (To = 10 K) amorphous ice spheres, in a circular orbit at 10(4) AU from the Sun. The main object of this study was to examine the conditions under which the transition temperature from amorphous into cubic ice (Ta = 137 K) would be reached. It was shown that the influence of the short-lived radionuclide 26Al dominates the effect of other radioactive species for bodies of radii up to approximately 50 km. Consequently, if we require comets to retain their ice in amorphous form, as suggested by observations, an upper limit of approximately 4 x 10(-9) is obtained for the initial 26Al abundance in comets, a factor of 100 lower than that of the inclusions in the Allende meteorite. A lower limit for the formation time of comets may thus be derived. The possibility of a coexistence of molten cometary cores and extended amorphous ice mantles is ruled out. Larger icy spheres (R > 100 km) reached Ta even in the absence of 26Al, due to the decay of the other radionuclides. As a result, a crystalline core formed whose relative size depended on the composition assumed. Thus the outermost icy satellites in the solar system, which might have been formed of ice in the amorphous state, have probably undergone crystallization and may have exhibited eruptive activity when the gas trapped in the amorphous ice was released (e.g., Miranda).

Aluminum↗
PubMed1993

Polycyclic aromatic hydrocarbons in the atmospheres of Titan and Jupiter.

Polycyclic aromatic hydrocarbons (PAHs) are important components of the interstellar medium and carbonaceous chondrites, but have never been identified in the reducing atmospheres of the outer solar system. Incompletely characterized complex organic solids (tholins) produced by irradiating simulated Titan atmospheres reproduce well the observed UV/visible/IR optical constants of the Titan stratospheric haze. Titan tholin and a tholin generated in a crude simulation of the atmosphere of Jupiter are examined by two-step laser desorption/multiphoton ionization mass spectrometry. A range of two- to four-ring PAHs, some with one to four alkylation sites are identified, with net abundance approximately 10(-4) g g-1 (grams per gram) of tholins produced. Synchronous fluorescence techniques confirm this detection. Titan tholins have proportionately more one- and two-ring PAHs than do Jupiter tholins, which in turn have more four-ring and larger PAHs. The four-ringed PAH chrysene, prominent in some discussions of interstellar grains, is found in Jupiter tholins. Solid state 13C NMR spectroscopy suggests approximately equal to 25% of the total C in both tholins is tied up in aromatic and/or aliphatic alkenes. IR spectra indicate an upper limit in both tholins of approximately equal to 6% by mass in benzenes, heterocyclics, and PAHs with more than four rings. Condensed PAHs may contribute at most approximately 10% to the observed detached limb haze layers on Titan. As with interstellar PAHs, the synthesis route of planetary PAHs is likely to be via acetylene addition reactions.

Ammonia↗
PubMed1997

The infrared spectra of nitriles and related compounds frozen in Ar and H2O.

We present the 2320-2050 cm-1 (4.31-4.88 micrometers) infrared spectra of 16 solid-state nitriles, isonitriles, and related compounds in order to facilitate the assignment of absorption features in a spectral region now becoming accessible to astronomers for the first time through the Infrared Space Observatory (ISO). This frequency range spans the positions of the strong C triple bond N stretching vibration of these compounds and is inaccessible from the ground due to absorption by CO2 in the terrestrial atmosphere. Band positions, profiles, and intrinsic strengths (A values) were measured for compounds frozen in Ar and H2O matrices at 12 K. The molecular species examined included acetonitrile, benzonitrile (phenylcyanide), 9-anthracenecarbonitrile, dimethylcyanamide, isopropylnitrile (isobutyronitrile), methylacrylonitrile, crotononitrile, acrylonitrile (vinyl cyanide), 3-aminocrotononitrile, pyruvonitrile, dicyandiamide, cyanamide, n-butylisocyanide, methylisocyanoacetate, diisopropylcarbodiimide, and hydrogen cyanide. The C triple bond N stretching bands of the majority of nitriles fall in the 2300-2200 cm-1 (4.35-4.55 micrometers) range and have similar positions in both Ar and H2O matrices, although the bands are generally considerably broader in the H2O matrices. In contrast, the isonitriles and a few exceptional nitriles and related species produce bands at lower frequencies spanning the 2200-2080 cm-1 (4.55-4.81 micrometers) range. These features also have similar positions in both Ar and H2O matrices, and the bands are broader in the H2O matrices. Three of the compounds (pyruvonitrile, dicyandiamide, and cyanamide) show unusually large shifts of their C triple bond N stretching frequencies when changing from Ar to H2O matrices. We attribute these shifts to the formation of H2O:nitrile complexes with these compounds. The implications of these results for the identification of the 2165 cm-1 (4.62 micrometers) "XCN" interstellar feature and the 4550 cm-1 (2.2 micrometers) feature of various objects in the solar system are discussed.

Argon↗
PubMed1998

Detection of water ice on Nereid.

We report the detection of the 1.5 and 2.0 micrometers absorption bands of water ice in the near-infrared reflection spectrum of Neptune's distant irregular satellite Nereid. The spectrum and albedo of Nereid appear intermediate between those of the Uranian satellites Umbriel and Oberon, suggesting a surface composed of a combination of water ice frost and a dark and spectrally neutral material. In contrast, the surface of Nereid appears dissimilar to those of the outer solar system minor planets Chiron, Pholus, and 1997 CU26. The spectrum thus provides support for the hypothesis that Nereid is a regular satellite formed in a circumplanetary environment rather than a captured object.

Astronomical Phenomena↗
PubMed1999

Cyanide Chemistry in Comet Hale-Bopp (C/1995 O1).

Observations of comet Hale-Bopp (C/1995 O1) have been carried out near perihelion (1997 March) at millimeter wavelengths using the NRAO 12 m telescope. The J=1-->0, 2-->1, and 3-->2 lines of HCN at 88, 177, and 265 GHz were measured in the comet as well as the J=3-->2 lines of H13CN, HC15N, and HNC. The N=2-->1 transition of CN near 226 GHz was also detected, and an upper limit was obtained for the J=2-->1 line of HCNH+. From the measurements, column densities and production rates have been estimated. A column density ratio of [HCN]/[HNC] = 7+/-1 was observed near perihelion, while it was found that [HCN]/[HCNH+] greater, similar 1. The production rates at perihelion for HCN and CN were estimated to be Q(HCN) approximately 1x1028 s-1 and Q(CN) approximately 2.6x1027 s-1, respectively, resulting in a ratio of [HCN]/[CN] approximately 3. Consequently, HCN is sufficiently abundant to be the parent molecule of CN in Hale-Bopp, and HCNH+ could be a source of HNC. Finally, carbon and nitrogen isotope ratios of 12C/13C = 109+/-22 and 14N/15N = 330+/-98 were obtained from HCN measurements, in agreement with previous values obtained from J=4-->3 data. Such ratios suggest that comet Hale-Bopp formed coevally with the solar system.

Journal Article↗
PubMed2000

A High-Eccentricity Low-Mass Companion to HD 89744.

HD 89744 is an F7 V star with a mass of 1.4 M middle dot in circle, an effective temperature of 6166 K, an age of 2.0 Gyr, and metallicity &sqbl0;Fe&solm0;H&sqbr0;=0.18. The radial velocity of the star has been monitored with the Advanced Fiber-Optic Echelle spectrograph at the Whipple Observatory since 1996, and evidence has been found for a low-mass companion. The data were complemented by additional data from the Hamilton spectrograph at Lick Observatory during the companion's periastron passage in the fall of 1999. As a result, we have determined the star's orbital wobble to have a period P=256 days, an orbital amplitude K=257 m s-1, and an eccentricity e=0.7. From the stellar mass, we infer that the companion has a minimum mass m2sini=7.2 MJ in an orbit with a semimajor axis a2=0.88 AU. The eccentricity of the orbit, among the highest known for extrasolar planets, continues the trend that extrasolar planets with semimajor axes greater than about 0.15 AU tend to have much higher eccentricities than are found in our solar system. The high metallicity of the parent star reinforces the trend that parent stars of extrasolar planets tend to have high metallicity.

Journal Article↗
PubMed2000

Supernovae versus Neutron Star Mergers as the Major r-Process Sources.

I show that recent observations of r-process abundances in metal-poor stars are difficult to explain if neutron star mergers (NSMs) are the major r-process sources. In contrast, such observations and meteoritic data on 182Hf and 129I in the early solar system support a self-consistent picture of r-process enrichment by supernovae (SNe). While further theoretical studies of r-process production and enrichment are needed for both SNe and NSMs, I emphasize two possible direct observational tests of the SN r-process model: gamma rays from the decay of r-process nuclei in SN remnants and surface contamination of the companion by SN r-process ejecta in binaries.

Journal Article↗