Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “phasing”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 487 records · Page 27Linked to original sources

Reversed-phase high-performance liquid chromatography of mouse epidermal growth factor and its congeners: mobile phase optimization with ion-pairing additives.

Optimization of the mobile phase in reversed-phase high-performance liquid chromatography has been examined with respect to the separation of multiple components from mouse epidermal growth factor preparations. Neither trifluoroacetic acid, nor heptafluorobutyric acid afforded optimal separations when added in various concentrations as potential ion-pairing agents, requiring low ionic strengths and yielding separations that were susceptible to changes in packings due to differences in stationary phase coverage and the presence of accessible silanol groups on the C-18 phases used. Pentadecafluorooctanoic acid, on the other hand, gave a reproducible, effective separation when combined with 0.155 M sodium chloride in the primary solvent, and eluted with a gradient of acetonitrile-1-propanol as the secondary solvent. Additional selectivities were conferred by the addition of triethylamine (0.015 M) to the mobile phase containing pentadecafluorooctanoic acid. These studies illustrate the value of such mixed mobile phases in achieving complex separations of closely eluted polypeptides.

Amino Acid Sequence↗

Analysis and critical comparison of the reversed-phase and ion-exchange contributions to retention on polybutadiene coated zirconia and octadecyl silane bonded silica phases.

The two major modes of retention of basic compounds in reversed-phase liquid chromatography on both octadecyl silane bonded silica-based (ODS) and polybutadiene coated zirconia (PBD-ZrO2) materials are hydrophobic and ion-exchange (Coulombic) interactions. Although the influence of reversed-phase and Coulombic interactions on the chromatography of organic cations is qualitatively well recognized, the quantitative relationship between hydrophobic and ion-exchange interactions remains unclear. In this work, the retention mechanisms on both of the above types of phases were probed by studying the retention of a homologous series of p-alkylbenzylamines as a function of the ammonium concentration in the eluent. The various columns tested were studied in terms of plots of retention factor vs. the inverse of the displacingcation concentration. The analysis of such plots as well as plots of log k' vs. number of methylene groups in the solutes and plots of log k' vs. log[NH4+] clearly shows that at least two types of sites--a pure reversed-phase site and a "hydrophobically-assisted ion-exchange site" similar to the type of site described by Neue [J. Chromatogr. A 925 (2001) 49] are needed to explain the observations. In addition, we have found a quantitative measure of the relative amount of reversed-phase and ion-exchange interaction on a given solute has on a given stationary phase which allows unambiguous classification of columns. It is now clear that ion-exchange contributions to retention on PBD-ZrO2, sometimes exceeding 90%, are even more important than previously thought and relative to hydrophobic interaction much more significant on PBD-ZrO2 than on ODS type-B silicas.

Buffers↗

Selectivity of alkylamide bonded-phases with respect to organic acids under reversed-phase conditions.

It was shown previously by Czajkowska et al. [J. Chromatogr. A, 691 (1995) 217] that alkylamide phases are better for separating pyridinecarboxylic acids than conventional alkyl packings. They allow separation of these compounds from hydrophobic substances over a wide range of mobile phase compositions. In the current work the retention data for pyridinedicarboxylic acids were measured on monomeric and polymeric alkylamide phases at 35 degrees C by using the acetonitrile-water eluent and utilized to calculate the nonspecific (methylene) and specific (carboxylic and amine) selectivities. Subsequently, the selectivity data were plotted against the pH of the mobile phase. It was shown that while the methylene selectivity does not change much at the pH range from 2 to 5, the specific selectivities studied depend strongly on the pH of the mobile phase. The magnitude of this dependence is determined by the type of the bonded phase and silica support as well as the length of the terminal alkyl groups.

Acetonitriles↗

Metabolism of methandrostenolone in the horse: a gas chromatographic-mass spectrometric investigation of phase I and phase II metabolism.

The phase I and phase II metabolism of the anabolic steroid methandrostenolone was investigated following oral administration to a standardbred gelding. In the phase I study, metabolites were isolated from the urine by solid-phase extraction, deconjugated by acid catalysed methanolysis and converted to their O-methyloxime trimethylsilyl derivatives. GC-MS analysis indicated the major metabolic processes to be sequential reduction of the A-ring and hydroxylation at C6 and C16. In the phase II study, unconjugated, beta-glucuronidated and sulfated metabolites were fractionated and deconjugated using a combination of liquid-liquid extraction, enzyme hydrolysis, solid-phase extraction and acid catalysed methanolysis. Derivatization followed by GC-MS analysis revealed extensive conjugation to both glucuronic and sulfuric acids, with only a small proportion of metabolites occurring in unconjugated form.

Administration, Oral↗

Ganglioside GM1 and asialo-GM1 at low concentration are preferentially incorporated into the gel phase in two-component, two-phase phosphatidylcholine bilayers.

Multilamellar liposomes composed of 1:1 dielaidoylphosphatidylcholine: dipalmitoylphosphatidylcholine at 20 degrees C contain laterally separated gel and liquid-crystalline phases that can be identified by electron microscopy in freeze-etch replicas on the basis of their distinctive morphology. Visualization of marker proteins that specifically bind to glycosphingolipids included in these liposomes has revealed that, at 1 mol % or less, the ganglioside GM1 and the neutral asialo-GM1 derived from it are localized within the gel-phase regions exclusively. Increasing the mole fraction of the glycosphingolipids results in the appearance of marker in the fluid-phase regions. Another neutral glycosphingolipid, Forssman, does not display a phase preference and is found in both phases at a low mole percent. The phase preference of these three glycosphingolipids depends primarily upon interactions between the hydrophobic moieties of these molecules and the matrix phosphatidylcholines.

1,2-Dipalmitoylphosphatidylcholine↗

Phospholipid lateral phase separation and the partition of cis-parinaric acid and trans-parinaric acid among aqueous, solid lipid, and fluid lipid phases.

The partition of cis-parinaric acid (9,11,13,15-cis, trans, trans,cis-octadecatetraenoic acid, cis-PnA) and trans-parinaric acid (9,11,13,15-all-trans-octadecatetraenoic acid, trans-PnA) among aqueous, solid lipid, and fluid lipid phases has been measured by three spectroscopic parameters: absorption spectral shifts, fluorescence quantum yield, and fluorescence polarization. The solid lipid was dipalmitoylphosphatidylcholine (DPPC); the fluid lipid was palmitoyldocosahexaenoylphosphatidylcholine (PDPC). Mole fraction partition coefficients between lipid and water were determined by absorption spectroscopy to be for ci--PnA, 5.3 X 10(5) with a solid lipid and 9 X 10(5) with fluid lipid and, for trans-PnA, 5 X 10(6) with solid lipid and 1.7 X 10(6) with fluid lipid. Ratios of the solid to the fluid partition coefficients (Kps/f) are 0.6 +/- 0.2 for cis-PnA and 3 +/- 1 for trans-PnA. A phase diagram for codispersions of DPPC and PDPC has been constructed from the measurements of the temperature dependence of the fluorescence quantum yield and polarization of cis-PnA and trans-PnA and their methyl ester derivatives. A simple analysis based on the phase diagram and fluorescence data allows additional calculations of Kps/f's which are determined to be 0.7 +/- 0.2 for the cis probes and 4 +/- 1 for the trans probes. The relative preference of trans-PnA for solid phase lipids and its enhanced quantum yield in solid phase lipids make it sensitive to a few percent solid. The trans probes provide evidence that structural order may persist in dispersions of these phospholipids 10 degrees C or more above their transition temperature. It is concluded that measurements of PnA fluorescence polarization vs. temperature are better suited than measurements of quantum yield vs. temperature for determining phospholipid phase separation.

Fatty Acids, Unsaturated↗

Mixtures of n-octyl-beta-D-glucoside and triethylene glycol mono-n-octyl ether: phase behavior and micellar structure near the liquid-liquid phase boundary.

The phase behavior and microstructure of aqueous mixtures of n-octyl-beta-D-glucoside (C8betaG1) and triethylene glycol mono-n-octyl ether (C8E3) is presented. C8betaG1 forms a one-phase micellar solution in water at surfactant concentrations up to 60 wt %, whereas mixtures with C8E3 show a liquid-liquid phase transition at low surfactant concentration. The position of this phase boundary for mixtures can be rationally shifted in the temperature-composition window by altering the ratio of the two surfactants. Small-angle neutron scattering is used to determine the size and shape of the mixed micelles and to characterize the nature of the fluctuations near the cloud point of the micellar solutions. The C8betaG1/C8E3 solutions are characterized by concentration fluctuations that become progressively stronger upon approach to the liquid-liquid phase boundary, whereas micellar growth is negligible. Such observations confirm previous views of the role of the surfactant phase boundary in tuning attractive micellar interactions, which can be used effectively to change the nature and strength of interparticle interactions in colloidal dispersions. Colloidal silica particles were then added to these surfactant mixtures and were found to aggregate at conditions near the cloud point. This finding is relevant to current strategies for protein crystallization.

Colloids↗

The effects of E2 supplementation from the early proliferative phase to the late secretory phase of the endometrium in hMG-stimulated IVF-ET.

PURPOSE: Our purpose was to determine if pregnancy rates (PRs) for hMG (human menopausal gonadotropin)-stimulated IVF-ET (in vitro fertilization--embryo transfer) can be increased by estradiol (E2) supplementation from the early proliferative phase to the late secretory phase of the endometrium. METHOD: Eighty-one infertile women with pure tubal factor were randomized into two groups. One group received no E2 supplementation (control group) and the other received oral E2 supplementation (2 mg two times daily) from the early proliferative phase starting on the third day of the menstrual cycle to the late secretory phase of the endometrium, with hMG stimulation for ovulation induction starting on the sixth day of the menstrual cycle. RESULTS: In 85 cycles, at least one embryo was transferred. Compared with the control group (n = 27 cycles), the E2 supplementation group (n = 58 cycles) had a significantly higher PR (control, 25.9%, versus E2 supplementation, 48.3%) and IR per ET (control, 10%, versus E2 supplementation, 26%), but FRs per retrieved oocytes were not statistically different between the two groups (control, 74%, versus E2 supplementation group, 73%). Four spontaneous abortions occurred in the E2 supplementation group, and one case in the control group. Ectopic pregnancy occurred in one case in the control group. CONCLUSIONS: Clinical PRs and IRs in the E2 supplementation group were significantly higher than in the control group, while FRs in the control group did not differ statistically from the E2 supplementation group. This suggests that E2 supplementation from the early proliferative phase to the late secretory phase of the endometrium in hMG-stimulated IVF-ET increases the receptivity of the endometrium for transferred embryos and clinical PRs.

Adult↗

Performance of micellar mobile phases in reversed-phase chromatography for the analysis of pharmaceuticals containing beta-blockers and other antihypertensive drugs.

A rapid and simple reversed-phase micellar liquid chromatographic procedure for the simultaneous determination of the beta-blockers atenolol, metoprolol and oxprenolol, the diuretics amiloride, bendroflumethiazide, chlorthalidone and hydrochlorothiazide and the vasodilator hydralazine in pharmaceuticals, is proposed. An interpretive optimization procedure, which uses the chromatographic data for only five mobile phases, was applied to select a suitable micellar mobile phase. A comparative study was also made of the performance of micellar and aqueous-organic mobile phases in the analysis of pharmaceuticals that combine beta-blockers and diuretics. The determination of all the drugs could be made with a micellar mobile phase of 0.15 mol l-1 sodium dodecyl sulfate and 7% propanol in 0.01 mol l-1 phosphate buffer at pH 3, with retention times below 20 min, whereas two different aqueous-organic mobile phases were needed to make the same analyses.

Adrenergic beta-Antagonists↗

Comparison of normal and reversed-phase solid phase extraction methods for extraction of beta-blockers from plasma using molecularly imprinted polymers.

A molecularly imprinted polymer (MIP) prepared using propranolol as template, methacrylic acid (MA) and ethylene glycol dimethacrylate (EGDMA) was used to develop SPE methods in "reversed-" and normal phase mode for an analogue of propranolol (M47070) with another analogue (M45655) used as an internal standard. The compounds were also extracted in reversed-phase mode onto a non-imprinted polymer. It was necessary to employ a protein precipitation step ahead of MIP-SPE in order to facilitate downstream analysis. High extraction efficiencies and linear calibration ranges were achieved using both reversed-phase (RP) and normal phase (NP) MIP-based methods. Extraction efficiencies were lower on the non-imprinted polymer indicating stronger retention by the MIP. This stronger retention was attributed to selective imprint-based binding by the MIP that was not available for the non-imprinted polymer. Although clean extracts were obtained in both RP and NP modes, low level interference from template-related impurities or degradation products compromised detection of M47070 at low concentrations for the MIP-based methods. This interference made accuracy of the MIP-based methods poorer at low concentrations. The reversed-phase method showed marginally better accuracy and precision than the normal phase method.

Adrenergic beta-Antagonists↗

[Magnetic resonance tomographic screening studies of the bone marrow with gradient echo sequences: (I) the contrast relations of phase-identical and phase-shifted gradient echo sequences. Studies on probands and pathological-anatomical preparations].

Anatomical specimens and normal persons were studied by gradient echo MR imaging to determine the influence of different echo times (TE) on bone marrow contrast. First of all, six normal persons were studied to determine specific echo times for in-phase and opposed-phase states. Using different sequences bone marrow contrast in isolated femoral bones was determined and compared to results of pathological exams. Red bone marrow had no signal on opposed-phase images; contrast between red and yellow marrow was higher on opposed-phase than on in-phase images. Bone marrow lesions can be expected to be visualised with high signal on opposed-phase images; this technique should be especially suited for MR imaging of bone marrow.

Adult↗

Toxicity studies of Blockal, a dietary supplement containing Phase 2 Starch Neutralizer (Phase 2), a standardized extract of the common white kidney bean (Phaseolus vulgaris).

The number of available dietary supplements containing "starch blockers" intended for weight loss has risen dramatically in recent years. These supplements are believed to reduce carbohydrate-derived calories by interfering with alpha-amylase, the digestive enzyme responsible for conversion of complex carbohydrates to simple absorbable sugars. The present paper reports the findings of single- and multiple-dose (4-week) oral toxicity studies in rats of the marketed dietary supplement Blockal. Blockal contains as its main ingredient Phase 2 Starch Neutralizer (Phase 2 or Phaseolamin 2250), a standardized extract derived from the common white kidney bean (Phaseolus vulgaris) that has been shown to have alpha-amylase-inhibiting activity. The Blockal acute oral LD50 exceeded the highest dose tested (3 g/kg body weight [bw]), which provided a single dose of 1668 mg/kg bw of Phase 2 white kidney bean extract. The no-observed-effect level (NOEL) seen in the 4-week study was equivalent to the highest Blockal dose tested (2 g/kg bw/day), which provided 1112 mg/kg/day of Phase 2 white kidney bean extract. The results of these studies support and are consistent with the safety of the marketed dietary supplement Blockal, and indirectly, the safety of its main ingredient, Phase 2 Starch Neutralizer (Phase 2 or Phaseolamin 2250), a standardized extract derived from the common white kidney bean.

Animals↗

Glucocorticoids and cellular immunity in vitro. Facilitation of the sensitization phase and inhibition of the effector phase of a lymphocyte anti-fibroblast reaction.

We studied the influence of glucocorticoids on the sensitization phase as well as on the cytolytic effector phase of an in vitro lymphocyte-mediated immune reaction. Lymphocytes obtained from the spleens or lymph nodes of unimmunized inbred rats were sensitized against foreign rat or mouse embryonic fibroblasts in cell culture. The capacity of the sensitized lymphocytes to produce a cytolytic effect was tested by transferring them to target fibroblast cultures. Injury to target fibroblasts was measured by release of radioactive (51)Cr from previously labeled fibroblasts or by direct count of viable fibroblasts after incubation with sensitized lymphocytes. Various concentrations of water-soluble hydrocortisone or prednisolone were added to cell cultures during the 5 day sensitization phase and/or during the subsequent cytolytic effector phase and the influence of these hormones on the number and cytolytic capacity of the lymphocytes was measured. During the sensitization phase, the presence of glucocorticoid hormones, at concentrations of about 1 microg/ml, led to a profound decrease in the total number of recoverable lymphocytes. However, the per cent of large transformed lymphocytes was much greater in these treated cultures. The antigen-specific cytolytic capacity per cell of the glucocorticoid-treated lymphocytes, after the hormone was removed, was several times greater than that of lymphocytes sensitized in the absence of added hormones. Glucocorticoids influenced the effector phase of the reaction by inhibiting lymphocyte-mediated injury to target fibroblasts. The hormones, at concentrations of about 1 microg/ml, inhibited the cytolytic effect by about 50% without reducing the viability of the sensitized lymphocytes. Dose-dependent toxicity to lymphocytes and increasing inhibition of cytolytic effect appeared at higher concentrations of hormones. Thus, hydrocortisone and prednisolone, at concentrations of about 1 microg/ml, did not suppress the induction of sensitization, a process which they seem to facilitate in vitro. However, similar concentrations of these hormones appear to inhibit the cytolytic effector mechanism of sensitized lymphocytes. These findings may be relevant to the use of glucocorticoids as immunosuppressive agents in vivo.

Animals↗

Analysis of SBIR phase I and phase II review results at the National Institutes of Health.

A cohort of phase I and phase II summary statements for the SBIR grant applications was evaluated to determine the strengths and weaknesses in approved and disapproved applications. An analysis of outcome variables (disapproval or unfunded status) was examined with respect to exposure variables (strengths or shortcomings). Logistic regression models were developed for comparisons to measure the predictive value of shortcomings and strengths to the outcomes. Disapproved phase I results were compared with an earlier 1985 study. Although the magnitude of the frequencies of shortcomings was greater in the present study, the relative rankings within shortcoming class were more alike than different. Also, the frequencies of shortcomings were, with one exception, not significantly different in the two studies. Differences in the summary statement review may have accounted for some differences observed between the 1985 data and results of the present study. Comparisons of Approved/Disapproved and Approved-Unfunded/Funded yielded the following observations. For phase I applicants, a lack of a clearly stated, testable hypothesis, a poorly qualified or described investigative team, and inadequate methodological approaches contributed significantly (in that order) to a rating of disapproval. A critical flaw for phase II proposals was failure to accomplish objectives of the phase I study. Methodological issues also dominate the distinctions in both comparison groups. A clear result of the data presented here and that published previously is that SBIR applicants need continuing assistance to improve the chances of their success. These results should serve as a guide to assist NIH staff as they provide information to prospective applicants focusing on key elements of the application. A continuing review of the SBIR program would be helpful to evaluate the quality of the submitted science.

Commerce↗

Novel approach to prevent the transition from the hyperdynamic phase to the hypodynamic phase of sepsis: role of adrenomedullin and adrenomedullin binding protein-1.

OBJECTIVE: To determine whether the combined administration of adrenomedullin and adrenomedullin binding protein-1 (AM/AMBP-1) has any modulatory effects on the cardiovascular response during the progression of sepsis. SUMMARY BACKGROUND DATA: Polymicrobial sepsis is characterized by an early, hyperdynamic phase followed by a late, hypodynamic phase. Recent studies have shown that AM, a newly reported potent vasodilator peptide, plays a major role in initiating the hyperdynamic response. Moreover, the reduced vascular responsiveness to AM appears to be responsible for the transition from the hyperdynamic phase to the hypodynamic phase of sepsis. Although the novel AMBP-1 augments AM-mediated action in vitro, it remains unknown whether AM/AMBP-1 maintains vascular responsiveness to AM at the late stage of sepsis. METHODS: Sepsis was induced by cecal ligation and puncture (CLP) in adult male rats. Human AMBP-1 (40 microg/kg body weight) was infused intravenously at the beginning of sepsis for 20 minutes and synthetic AM (12 microg/kg body weight) was continuously administrated for the entire study period using an Alzert micro-osmotic pump, beginning 3 hours before the induction of sepsis. At 20 hours after the onset of sepsis (i.e., the late stage), cardiac output, systemic oxygen delivery, stroke volume, total peripheral resistance, and organ blood flow in the liver, gut, kidneys, and heart were determined using radioactive microspheres. Plasma levels of transaminases (ALT, AST) and lactate were also measured. Additional studies were conducted to determine whether administration of AM alone or AMBP-1 alone alters the cardiovascular response at 20 hours after CLP. In additional rats, the necrotic cecum was excised at 20 hours after CLP following AM/AMBP-1 treatment, the peritoneal cavity irrigated with saline, and the midline incision closed in layers. Survival was then examined for a period of 10 days thereafter. RESULTS: Administration of AM/AMBP-1 prevented the decrease in the measured systemic and regional hemodynamic parameters at 20 hours after the onset of sepsis. Moreover, AM/AMBP-1 significantly attenuated hepatic damage and the elevation of plasma lactate, and prevented hemoconcentration. Treatment with AM/AMBP-1 reduced the overall 10-day mortality rate from 57% to 7%. Neither AM nor AMBP-1 alone was sufficient to maintain cardiovascular stability at 20 hours after CLP. CONCLUSIONS: Since AM/AMBP-1 delays or even prevents the transition from the hyperdynamic phase to the hypodynamic phase of sepsis, attenuates tissue injury, and decreases sepsis-induced morality, these agents should provide a novel approach for maintaining cardiovascular stability and preventing cell and organ damage during the progression of polymicrobial sepsis.

Adrenomedullin↗

Phase signal coupling induced n:m phase synchronization in drive-response oscillators.

We have studied phase synchronization between two identical Rössler oscillators connected in the drive-response configuration by a single phase signal. Before the transition to phase synchronization, the distribution of the time interval between consecutive 2pi jumps shows several sharp peaks. With a strong phase signal coupling, the n:m phase synchronization between the oscillators can be achieved. For the n (not equal) m phase synchronizing state, some values of coupling strength result in a phenomenon characterized by a reduction in the mean amplitude of the response termed amplitude reduction. In these regions, the mean rotation speed of the response remains approximately constant while the locking ratio n:m varies.

Journal Article↗

Pressure evolution lattice-Boltzmann-equation method for two-phase flow with phase change.

A lattice-Boltzmann-equation method for nonideal gases augmented by the pressure evolution equation is proposed to simulate isothermal two-phase fluid flow with phase change. The pressure evolution equation is derived by taking time derivative of the equation of state for nonideal gases. Unlike previous methods that use the equation of state to update pressure, the pressure field is evolved using the pressure evolution equation. The new approach has two advantages. First, it can avoid spurious pressure fluctuations at phase interfaces that develop owing to the pressure update by the equation of state, thus improving numerical stability of the method. Second, it permits compressibility of the fluid at phase interfaces when phase change occurs due to pressurization and depressurization. The proposed method is applied to simulate an isothermal phase change process. The numerical result is in excellent agreement with the analytical solution.

Journal Article↗

Reentrant synclinic phase in an electric-field-temperature-phase diagram for enantiomeric mixtures of an antiferroelectric liquid crystal.

The threshold electric field E(th) for a transition from the anticlinic to the synclinic phase of enantiomeric mixtures of the liquid crystal TFMHPOBC was measured as a function of temperature T and enantiomeric excess X. For small X the phase boundary curve on a temperature-electric-field phase diagram exhibits the phase sequence synclinic-anticlinic-reentrant synclinic on decreasing the temperature. At one point along the curve the quantity dT/dE--> infinity. For large values of enantiomeric excess a reentrant phase is not observed. The results are discussed using a simple phenomenological theory that accounts for layer-layer interactions, such that the electric-field-induced transition to the synclinic phase, although completed by solitary-wave propagation, is facilitated by a percolation mechanism.

Journal Article↗