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Biological features of women's alcohol use: a review.

Sensitivity to gender issues in the research community has generated a modest but growing amount of data on the biological effects of alcohol consumption on women. Data generally indicate that the same amounts of alcohol have greater effects on women and that women develop more severe alcohol problems than men over shorter drinking histories. Despite a number of studies, however, there are no clear differences between women and men in the impact of alcohol consumption on cognitive processes. Although the findings are mixed, the data point toward greater physiological deterioration among women as compared with men who have similar drinking histories. These differences may be related to the differences in patterns of social recognition and reaction that occur in instances of alcoholism among women. Such differences are confirmed by other data that indicate greater social isolation and general disorganization among female alcoholics than among male alcoholics. The risks of fetal alcohol syndrome that are associated with heavy alcohol consumption among women during pregnancy have been established, and a complex of other relationships between alcohol consumption and reproductive-related systems and behaviors exists. Linkages between sexual dysfunction, sexual satisfaction, and alcohol consumption appear to exist, but have not yet become clearly understood. It appears that alcohol may be used as a self-medication to cope with perceived problems of sexuality. It also appears that heavy alcohol consumption can contribute to sexual dysfunction and dissatisfaction. A growing body of sophisticated experimental research has established relationships between patterns of alcohol metabolism and phases of the menstrual cycle, with this literature offering some of the clearest indications of distinctive differences between the sexes in the biological consequences and correlates of alcohol consumption.

Alcoholism↗

Sub-exemplar shape tuning in human face-related areas.

Although human face recognition performance shows high selectivity, even for unfamiliar faces, the neuronal circuitry underlying this high performance is poorly understood. Two extreme alternatives can be considered: either a "labeled-line" principle, in which subtle changes in face images lead to activation of differently tuned neuronal populations, or a coarse coding principle, where the high face selectivity is coded by the relative activation of broadly tuned neurons. In this study, we set to parametrically examine the shape and selectivity profile of face-related visual areas. To that end, we applied the functional magnetic resonance (fMR)-adaptation paradigm. Unfamiliar face stimuli were morphed into sets ranging from identical faces, through subtle morphing, to completely different exemplars. The fusiform face area (FFA) revealed high face sensitivity, so that even facial images perceived as belonging to the same individual (<35%) were sufficient to produce full recovery from adaptation. Interestingly, the psychophysical detectability of facial differences paralleled the release from fMR-adaptation. These results support the labeled-line model where high sensitivity to face changes is paralleled by narrow tuning of neuronal populations selective to each face image, and they suggest that fMR-adaptation is closely related to behavior. The results bear strong implications to the nature of face-related neuronal responses.

Adaptation, Physiological↗

Emotion recognition system using short-term monitoring of physiological signals.

A physiological signal-based emotion recognition system is reported. The system was developed to operate as a user-independent system, based on physiological signal databases obtained from multiple subjects. The input signals were electrocardiogram, skin temperature variation and electrodermal activity, all of which were acquired without much discomfort from the body surface, and can reflect the influence of emotion on the autonomic nervous system. The system consisted of preprocessing, feature extraction and pattern classification stages. Preprocessing and feature extraction methods were devised so that emotion-specific characteristics could be extracted from short-segment signals. Although the features were carefully extracted, their distribution formed a classification problem, with large overlap among clusters and large variance within clusters. A support vector machine was adopted as a pattern classifier to resolve this difficulty. Correct-classification ratios for 50 subjects were 78.4% and 61.8%, for the recognition of three and four categories, respectively.

Autonomic Nervous System↗

Mechanisms of signal analysis and pattern perception in periodicity pitch.

Progress in the knowledge of auditory processing of complex sounds has been made through coordinated psychophysical, physiological and theoretical studies of periodicity pitch and combination tones. Periodicity pitch is the basis for human perception of musical notes and pitch of voiced speech. The mechanism of perception involves harmonic pattern recognition on the complex Fourier frequency spectra generated by auditory frequency analysis. Combination tones are perceptible distortion tones generated within the cochlea by nonlinear interaction of component stimulus tones. Perception of periodicity pitch is quantitatively accounted for by a two-stage process of frequency analysis subject to random errors and significant nonlinearities, followed by a pattern recognizer that operates very efficiently to measure the period of musical and speech sounds. The basic characteristic of the first stage is a Gaussian standard error function that quantifies the randomness in aural estimation of frequencies of component tones in a complex tone stimulus. Efficient aural measurement of neural spike intervals from the eighth nerve provides a physiological account for the psychophysical characteristic of aural frequency analysis with complex sounds. Although cochlear filtering is an essential stage in auditory frequency analysis, neural time following, rather than details of the filter characteristics, is the decisive factor in determining the precision of aural frequency measurement. It is likely that peripheral auditory coding is similar for sounds in periodicity pitch and in speech perception, although the 'second stage' representing central processing would differ.

Acoustic Stimulation↗

Coactivation and statistical facilitation in the detection of lines.

The redundant-signals effect describes the general phenomenon that simple reaction times to two simultaneously presented signals are typically faster than the corresponding reaction times to each of the signals presented alone. Recent studies (eg Miller 1982, 1986) indicate that models of probability summation in which an independent detection of both signals is assumed cannot completely account for the observed shortening of the reaction times. Therefore, models in which some kind of coactivation is assumed are often considered as an alternative explanation. In the present study simple reaction times to parallel lines are compared with those to orthogonal lines and single lines. Our first hypothesis is that because of the redundant-signals effect, the reaction time to configurations consisting of two lines (either parallel or orthogonal) will generally be faster than the reaction time to a single line. Furthermore, line detection can be related to orientation-specific line detectors. Therefore, parallel lines may be thought to activate similar line detectors and, by coactivation, facilitate detection. As our second hypothesis we thus expect that the reaction time to parallel lines will be shorter than the reaction time to orthogonal lines. To test these hypotheses, we conducted a simple reaction-time experiment in which signal onset asynchronies ranging from 0 to +/- 56 ms for the orthogonal lines were used. In addition, reaction times to parallel lines and single lines were measured. Both hypotheses are supported by our data. We formulate a stochastic model which is able to explain both statistical facilitation and coactivation in a physiologically plausible way.

Adult↗

Recent developments in the neuropsychology and physiology of face processing.

This chapter will review neuropsychological studies of face processing defects. Recent research in this field has been dominated by evidence of preserved face processing in patients who are unaware of these abilities. This phenomenon is referred to as covert recognition and forms a main focus for this review. The second part of the chapter reviews the advances in physiological studies of the brain mechanisms underlying face processing. The relationship between normal perception of faces and information processing at the single cell level is considered. Finally the chapter discusses how the physiological findings relate to the pathology of face processing.

Agnosia↗

Exploring the neural basis of cognitive reserve.

There is epidemiologic and imaging evidence for the presence of cognitive reserve, but the neurophysiologic substrate of CR has not been established. In order to test the hypothesis that CR is related to aspects of neural processing, we used fMRI to image 19 healthy young adults while they performed a nonverbal recognition test. There were two task conditions. A low demand condition required encoding and recognition of single items and a titrated demand condition required the subject to encode and then recognize a larger list of items, with the study list size for each subject adjusted prior to scanning such that recognition accuracy was 75%. We hypothesized that individual differences in cognitive reserve are related to changes in neural activity as subjects moved from the low to the titrated demand task. To test this, we examined the correlation between subjects' fMRI activation and NART scores. This analysis was implemented voxel-wise in a whole brain fMRI dataset. During both the study and test phases of the recognition memory task we noted areas where, across subjects, there were significant positive and negative correlations between change in activation from low to titrated demand and the NART score. These correlations support our hypothesis that neural processing differs across individuals as a function of CR. This differential processing may help explain individual differences in capacity, and may underlie reserve against age-related or other pathologic changes.

Adaptation, Physiological↗

Egg recognition and counting reduce costs of avian conspecific brood parasitism.

Birds parasitized by interspecific brood parasites often adopt defences based on egg recognition but such behaviours are puzzlingly rare in species parasitized by members of the same species. Here I show that conspecific egg recognition is frequent, accurate and used in three defences that reduce the high costs of conspecific brood parasitism in American coots. Hosts recognized and rejected many parasitic eggs, reducing the fitness costs of parasitism by half. Recognition without rejection also occurred and some hosts banished parasitic eggs to inferior outer incubation positions. Clutch size comparisons revealed that females combine egg recognition and counting to make clutch size decisions--by counting their own eggs, while ignoring distinctive parasitic eggs, females avoid a maladaptive clutch size reduction. This is clear evidence that female birds use visual rather than tactile cues to regulate their clutch sizes, and provides a rare example of the ecological and evolutionary context of counting in animals.

Adaptation, Physiological↗

Stability and change in perception: spatial organization in temporal context.

Perceptual multistability has often been explained using the concepts of adaptation and hysteresis. In this paper we show that effects that would typically be accounted for by adaptation and hysteresis can be explained without assuming the existence of dedicated mechanisms for adaptation and hysteresis. Instead, our data suggest that perceptual multistability reveals lasting states of the visual system rather than changes in the system caused by stimulation. We presented observers with two successive multistable stimuli and found that the probability that they saw the favored organization in the first stimulus was inversely related to the probability that they saw the same organization in the second. This pattern of negative contingency is orientation-tuned and occurs no matter whether the observer had or had not seen the favored organization in the first stimulus. This adaptation-like effect of negative contingency combines multiplicatively with a hysteresis-like effect that increases the likelihood of the just-perceived organization. Both effects are consistent with a probabilistic model in which perception depends on an orientation-tuned intrinsic bias that slowly (and stochastically) changes its orientation tuning over time.

Adaptation, Physiological↗

The effect of background illumination on pattern onset visual evoked potentials.

The early part (first 200 msec) of pattern onset VEPs elicited by a dartboard pattern was studied in conditions of varying level of background illumination. The effect of pattern adaptation and pattern blurr was also studied. The observed complex behaviour of the main negativity within this part of the VEP can be best described in terms of a composite of two independent negative peaks labelled N100 and N130. In high luminance conditions peak N100 was dominant and the presence of N130 was indicated only by a 'notch' on the rising slope of the negativity. As luminance decreased the situation was reversed and N130 became a dominant feature of the negative wave. This finding did not depend on the particular choice of reference site. For checkerboard stimulation the same features were present, but variability of the VEP wave form was greater than in the case of dartboard stimulation. Present results relate the well-known pattern specific properties of the negativity in onset VEPs to N100 only, whereas N130 is not pattern specific. Lower and upper half-field stimulation produced peaks of opposite polarity at 100 msec but no change was observed in polarity of N130. These findings support the suggestion that these two parts of the negativity in pattern onset VEPs may have different cortical sources.

Adaptation, Physiological↗

Global orientation aftereffect in multi-attribute displays: implications for the binding problem.

We investigated the binding problem (e.g. the combination of edge information across attributes), using an orientation aftereffect paradigm (OAE). Horizontal layers of vertical edges were phase-shifted to create a global near-vertical orientation. Multi-attribute displays were created by alternating the attribute defining edges (e.g. luminance, colour, texture or motion) across layers. OAE magnitude was dependent only on the attributes used in the adaptation phase, and the similarity of attributes from adaptation to testing phase had no significant effect. Moreover, compared to single-attribute conditions, the cooperation between attributes is moderate. These results favour segregation models of the binding mechanism.

Adaptation, Physiological↗

Mechanisms of visual motion detection.

Visual motion is processed by neurons in primary visual cortex that are sensitive to spatial orientation and speed. Many models of local velocity computation are based on a second stage that pools the outputs of first-stage neurons selective for different orientations, but the nature of this pooling remains controversial. In a human psychophysical detection experiment, we found near-perfect summation of image energy when it was distributed uniformly across all orientations, but poor summation when it was concentrated in specific orientation bands. The data are consistent with a model that integrates uniformly over all orientations, even when this strategy is sub-optimal.

Adaptation, Physiological↗

Investigating the complexity of respiratory patterns during recovery from severe hypoxia.

Progressive hypoxemia in anesthetized, peripherally chemodenervated piglets results in initial depression of the phrenic neurogram (PN) culminating in phrenic silence and, eventually, gasping. These changes reverse after the 30 min reoxygenation (recovery) period. To determine if changes in the PN patterns correspond to changes in temporal patterning, we have used the approximate entropy (ApEn) method to examine the effects of maturation on the complexity of breathing patterns in chemodenervated, vagotomized and decerebrated piglets during severe hypoxia and reoxygenation. The phrenic neurogram in piglets was recorded during eupnea (normal breathing), severe hypoxia (gasping) and recovery from severe hypoxia in 31 piglets (2-35 days). Nonlinear dynamical analysis of the phrenic neurogram was performed using the ApEn method. The mean ApEn values for a recording of five consecutive breaths during eupnea, a few phrenic neurogram signals during gasping, the beginning of the recovery period, and five consecutive breaths at every 5 min interval for the 30 min recovery period were calculated. Our data suggest that gasping resulted in reduced duration of the phrenic neurogram, and the gasp-like patterns exist at the beginning of the recovery. But, the durations of phrenic neurograms during recovery were increased after 10 min postreoxygenation, but were restored 30 min post recovery. The ApEn (complexity) values of the phrenic neurogram during eupnea were higher than those of gasping and the early (the onset of) recovery from severe hypoxia (p < 0.01), but were not statistically different than 5 min post recovery regardless of the maturation stages. These results suggest that hypoxia results in a reversible reconfiguration of the central respiratory pattern generator.

Adaptation, Physiological↗

Classification of oligonucleotide fingerprints: application for microbial community and gene expression analyses.

MOTIVATION: Oligonucleotide fingerprinting of ribosomal RNA genes (OFRG) is a procedure that sorts rRNA gene (rDNA) clones into taxonomic groups through a series of hybridization experiments. The hybridization signals are classified into three discrete values 0, 1 and N, where 0 and 1, respectively, specify negative and positive hybridization events and N designates an uncertain assignment. This study examined various approaches for classifying the values including Bayesian classification with normally distributed signal data, Bayesian classification with the exponentially distributed data, and with gamma distributed data, along with tree-based classification. All classification data were clustered using the unweighted pair group method with arithmetic mean. RESULTS: The performance of each classification/clustering procedure was compared with results from known reference data. Comparisons indicated that the approach using the Bayesian classification with normal densities followed by tree clustering out-performed all others. The paper includes a discussion of how this Bayesian approach may be useful for the analysis of gene expression data.

Algorithms↗

Evolving controllers for a homogeneous system of physical robots: structured cooperation with minimal sensors.

We report on recent work in which we employed artificial evolution to design neural network controllers for small, homogeneous teams of mobile autonomous robots. The robots were evolved to perform a formation-movement task from random starting positions, equipped only with infrared sensors. The dual constraints of homogeneity and minimal sensors make this a non-trivial task. We describe the behaviour of a successful system in which robots adopt and maintain functionally distinct roles in order to achieve the task. We believe this to be the first example of the use of artificial evolution to design coordinated, cooperative behaviour for real robots.

Adaptation, Physiological↗

Isotropic-sequence-order learning in a closed-loop behavioural system.

The simplest form of sensor-motor control is obtained with a reflex. In this case the reflex can be interpreted as part of a closed-loop control paradigm which measures a sensor input and generates a motor reaction as soon as the sensor signal deviates from its desired (resting) state. This is a typical case of feedback control. However, reflex reactions are tardy, because they occur always only after a (for example, unpleasant) reflex-eliciting sensor event. This defines an objective problem for an organism which can only be avoided if the corresponding motor reaction is generated earlier. The goal of this study is to design a closed-loop control situation where temporal-sequence learning supersedes a tardy reflex reaction with a proactive anticipatory action. We achieve this by employing a second, earlier-occurring and causally coupled sensor event. An appropriate motor reaction to this early event prevents triggering of the original, primary reflex. Such causally coupled sensor events are common for animals, for example when smell predicts taste or when heat radiation precedes pain. We show that trying to achieve anticipatory control is a fundamentally different goal from trying to model a classical conditioning paradigm, which is an open-loop condition. To this end, we use a novel learning rule for temporal-sequence learning called isotropic-sequence-order (ISO) learning, which performs a confounded correlation between the primary sensor signal associated to the reflex and a predictive, earlier-occurring sensor input: this way the system learns the relation between the primary reflex and the earlier sensor input in order to create an earlier-occurring motor reaction. As a consequence of learning, the primary reflex will not be triggered any more, thereby permanently remaining in its desired resting state. In a robot application, we demonstrate that ISO learning can successfully solve the classical obstacle-avoidance task by learning to correlate a built-in reflex behaviour (retraction after touching) with earlier arising signals from range finders (before touching). Finally, we show that avoidance and attraction tasks can be combined in the same agent.

Adaptation, Physiological↗

Development and implementation of an algorithm for detection of protein complexes in large interaction networks.

BACKGROUND: After complete sequencing of a number of genomes the focus has now turned to proteomics. Advanced proteomics technologies such as two-hybrid assay, mass spectrometry etc. are producing huge data sets of protein-protein interactions which can be portrayed as networks, and one of the burning issues is to find protein complexes in such networks. The enormous size of protein-protein interaction (PPI) networks warrants development of efficient computational methods for extraction of significant complexes. RESULTS: This paper presents an algorithm for detection of protein complexes in large interaction networks. In a PPI network, a node represents a protein and an edge represents an interaction. The input to the algorithm is the associated matrix of an interaction network and the outputs are protein complexes. The complexes are determined by way of finding clusters, i. e. the densely connected regions in the network. We also show and analyze some protein complexes generated by the proposed algorithm from typical PPI networks of Escherichia coli and Saccharomyces cerevisiae. A comparison between a PPI and a random network is also performed in the context of the proposed algorithm. CONCLUSION: The proposed algorithm makes it possible to detect clusters of proteins in PPI networks which mostly represent molecular biological functional units. Therefore, protein complexes determined solely based on interaction data can help us to predict the functions of proteins, and they are also useful to understand and explain certain biological processes.

Algorithms↗