Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “SPECIES”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 415 records · Page 23Linked to original sources
PubMed1972

Deoxyribonucleic acid relatedness among species of Erwinia and between Erwinia species and other enterobacteria.

Relatedness in species of Erwinia was assessed by determining the extent of reassociation in heterologous deoxyribonucleic acid preparations. Thermal elution chromatography on hydroxyapatite was used to separate reassociated nucleotide sequences from nonreassociated sequences and to determine the thermal stability of related nucleotide sequences. An apparent 15% core of relatedness is present between fire blight, soft-rot, and "atypical" Erwinia species. All Erwinia species showed low to moderate reaction with representative enteric bacteria.

Biological Evolution↗
PubMed1991

Restriction fragment length polymorphisms in the ribosomal genes for species identification and subtyping of aerotolerant Campylobacter species.

Whole-cell chromosomal digests of 84 strains of aerotolerant Campylobacter (AC) were examined by using PvuII restriction fragment length polymorphisms of rRNA genes followed by hybridization with Escherichia coli 16S and 23S rRNA (ribotyping). The AC strains belonged to Campylobacter cryaerophila (n = 13) and a newly defined species, "C. butzleri" (n = 64). Strains of C. cryaerophila belonged to two hybridization groups: DNA group 1A (including the type strain of C. cryaerophila) and DNA group 1B (J. A. Kiehlbauch, D. J. Brenner, M. A. Nicholson, C. N. Baker, C. M. Patton, A. G. Steigerwalt, and I. K. Wachsmuth, J. Clin. Microbiol. 29:376-385, 1991). Six AC strains not classified as C. cryaerophila or "C. butzleri" were also included. All 35 sporadic human and animal isolates of "C. butzleri" sent to the Centers for Disease Control for identification showed different ribotype patterns. However, most "C. butzleri" strains contained common bands at approximately 3.0, 6.2, 12.0, and 15.0 kb; the 3.0-kb band was present in all but four strains. An additional 23 strains of "C. butzleri," isolated as part of special studies, contained the 3.0-kb band. Thus, on the basis of visual identification of the 3.0-kb band, 94% of available strains were correctly identified as "C. butzleri." Ribotyping demonstrated that C. cryaerophila strains (DNA groups 1A and 1B) were different from C. butzleri strains. All C. cryaerophila strains demonstrated a common ribosomal DNA restriction fragment of 3.2 kb; DNA group 1B strains contained an additional common band at 2.6 kb. Ribotyping patterns of AC species were easily distinguished from patterns of other Campylobacter, Helicobacter, and Wolinella species.(ABSTRACT TRUNCATED AT 250 WORDS)

Blotting, Southern↗
PubMed2000

Identification of Enterococcus species and phenotypically similar Lactococcus and Vagococcus species by reverse checkerboard hybridization to chaperonin 60 gene sequences.

Data from four recent studies (S. H. Goh et al., J. Clin. Microbiol. 36:2164-2166, 1998; S. H. Goh et al., J. Clin. Microbiol. 34:818-823, 1996; S. H. Goh et al., J. Clin. Microbiol. 35:3116-3121, 1997; A. Y. C. Kwok et al., Int. J. Syst. Bacteriol. 49:1181-1192, 1999) suggest that an approximately 600-bp region of the chaperonin 60 (Cpn60) gene, amplified by PCR with a single pair of degenerate primers, has utility as a potentially universal target for bacterial identification (ID). This Cpn60 gene ID method correctly identified isolates representative of numerous staphylococcal species and Streptococcus iniae, a human and animal pathogen. We report herein that this method enabled us to distinguish clearly between 17 Enterococcus species (Enterococcus asini, Enterococcus rattus, Enterococcus dispar, Enterococcus gallinarum, Enterococcus hirae, Enterococcus durans, Enterococcus cecorum, Enterococcus faecalis, Enterococcus mundtii, Enterococcus casseliflavus, Enterococcus faecium, Enterococcus malodoratus, Enterococcus raffinosus, Enterococcus avium, Enterococcus pseudoavium, Enterococcus new sp. strain Facklam, and Enterococcus saccharolyticus), and Vagococcus fluvialis, Lactococcus lactis, and Lactococcus garvieae. From 123 blind-tested samples, only two discrepancies were observed between the Facklam and Collins phenotyping method (R. R. Facklam and M. D. Collins, J. Clin. Microbiol. 27:731-734, 1989) and the Cpn60 ID method. In each case, the discrepancies were resolved in favor of the Cpn60 ID method. The species distributions of the 123 blind-tested isolates were Enterococcus new sp. strain Facklam (ATCC 700913), 3; E. asini, 1; E. rattus, 4; E. dispar, 2; E. gallinarum, 20; E. hirae, 9; E. durans, 9; E. faecalis, 12; E. mundtii, 3; E. casseliflavus, 8; E. faecium, 25; E. malodoratus, 3; E. raffinosus, 8; E. avium, 4; E. pseudoavium, 1; an unknown Enterococcus clinical isolate, sp. strain R871; Vagococcus fluvialis, 4; Lactococcus garvieae, 3; Lactococcus lactis, 3; Leuconostoc sp., 1; and Pediococcus sp., 1. The Cpn60 gene ID method, coupled with reverse checkerboard hybridization, is an effective method for the identification of Enterococcus and related organisms.

Bacterial Typing Techniques↗
PubMed1992

Cytogenetics of bisexual/unisexual species of Poecilia. III. The karyotype of Poecilia formosa, a gynogenetic species of hybrid origin.

Chromosomes of the Amazon molly, Poecilia formosa, a unisexual species of hybrid origin, were investigated by C-banding, silver staining, and fluorescent staining with DAPI, quinacrine dihydrochloride, and chromomycin A3. Analysis of heterochromatin distribution indicates that chromosomes similar to the W chromosome of P. latipinna are not present in the unisexual species. Therefore, morphologically differentiated sex chromosomes do not form the basis of the unisexuality in P. formosa. The number and location of nucleolar organizer regions vary in P. formosa and do not correlate well with those of the parental species.

Animals↗
PubMed2001

A description of two new species of coccidia (Apicomplexa: Eimeriidae) from African reptiles with nomenclatural corrections for two Caryospora and one Eimeria species from snakes.

Two new species of coccidian parasites are described from African reptiles. Oocysts of Eimeria foulshami sp. n. from the plated lizard Gerrhosaurus major bottegoi Del Prato of Sudan are ellipsoidal, 24.1 x 14.9 (23-26.5 x 14-17.8) microm with a bilayered, colourless oocyst wall and lack polar granules. The ellipsoidal sporocysts average 8.6 x 4.6 (7-10.6 x 4.4-7) microm and possess a prominent, globular, sporocyst residuum. Oocysts of Caryospora regentensis sp. n. from the Eastern green mamba Dendroaspis augusticeps Smith, 1849 [corrected] of Kenya are spherical to subspherical, 16.8 x 16.4 (16-17.6 x 15-17.2) microm with a bilayered oocyst wall and a single polar granule. The ellipsoidal sporocysts average 13.0 x 10.3 (10.2-14 x 9.2-11) microm and possess a Stieda and substieda body and a prominent globular sporocyst residuum. Oocysts of Caryospora legeri Hoare, 1933 are reported from a hissing sand snake, Psammophis sibilans sibilans L. from Nigeria, representing a new geographical record. The oocysts are slightly larger than the type, but otherwise identical. Caryospora psammophi Bray, 1960 and C. hermae Bray, 1960 from Psammophis sibilans phillipsi, oocysts of which are morphologically similar to and overlap in dimensions with C. legeri Hoare, 1933, are synonymised with the latter species. Eimeria samiae Iskander et Tadros, 1979 is emended to E. samyadeli to reflect the gender of the person the species was named after and because E. sani is preoccupied. In addition to these findings, Eimeria bohemi Modrý, Slapeta et Koudela, 2000 and oocysts of an unidentified spherical Eimieria sp. are reported from Chamaeleo dilepis dilepis Leach from Cameroon.

Africa↗
PubMed2002

Myxobolus species (Myxozoa), parasites of fishes in the Okavango River and Delta, Botswana, including descriptions of two new species.

Fieldwork was conducted in 1998 and 1999 in the Okavango River and Delta and a total of 275 fishes representing 31 species were examined for the presence of myxosporean parasites. A total of seven myxosporeans of the genus Myxobolus Bütschli, 1882 were found infecting the fishes. Two new species namely Myxobolus etsatsaensis sp. n. from Barbus thamalakanensis Fowler, 1935 and M. paludinosus sp. n. from Barbus paludinosus Peters, 1852 are described. Myxobolus africanus Fomena, Bouix et Birgi, 1985, M. camerounensis Fomena, Marqués et Bouix, 1993, M. hydrocyni Kostoïngue et Toguebaye, 1994, M. nyongana (Fomena, Bouix et Birgi, 1985) and M. tilapiae Abolarin, 1974 are recorded for the first time in Botswana and descriptions of these species are provided.

Animals↗
PubMed2000

ITS-2 rDNA sequencing of Gnathostoma species (Nematoda) and elucidation of the species causing human gnathostomiasis in the Americas.

From several gnathostome species the complete internal transcribed spacer ITS-2 ribosomal DNA (rDNA) repeat sequence and a fragment of the 5.8S rDNA were obtained by direct polymerase chain reaction cycle-sequencing and silver-staining methods. The size of the complete ITS-1 sequence in agarose gel electrophoresis was also obtained. The ITS-2 enabled the differentiation of Gnathostoma spinigerum from Thailand and Gnathostoma binucleatum from Mexico and Ecuador and confirmed the validity of the latter. Gnathostoma turgidum, Gnathostoma sp. I (=Gnathostoma procyonis sensu Almeyda-Artigas et al., 1994), and Gnathostoma sp. II (=G. turgidum sensu Foster, 1939 pro parte), all from Mexico, proved to be independent species, but Gnathostoma sp. III, also from Mexico, could not be differentiated from G. turgidum. In Mexico and Ecuador, gnathostomes involved in human infection and that had been classified as G. spinigerum belong to G. binucleatum. The 5.8S rDNA sequences of the 6 Gnathostoma species studied were identical. The results of the ITS-1 agreed with those results of ITS-2.

Animals↗
PubMed2003

Reproduction and larval morphology of broadcasting and viviparous species in the Cryptasterina species complex.

The Cryptasterina group of asterinid sea stars in Australasia comprises cryptic species with derived life histories. C. pentagona and C. hystera have planktonic and intragonadal larvae, respectively. C. pentagona has the gonochoric, free-spawning mode of reproduction with a planktonic lecithotrophic brachiolaria larva. C. hystera is hermaphroditic with an intragonadal lecithotrophic brachiolaria, and the juveniles emerge through the gonopore. Both species have large lipid-rich buoyant eggs and well-developed brachiolariae. Early juveniles are sustained by maternal nutrients for several weeks while the digestive tract develops. C. hystera was reared in vitro through metamorphosis. Its brachiolariae exhibited the benthic exploration and settlement behavior typical of planktonic larvae, and they attached to the substratum with their brachiolar complex. These behaviors are unlikely to be used in the intragonadal environment. The presence of a buoyant egg and functional brachiolaria larva would not be expected in an intragonadal brooder and indicate the potential for life-history reversal to a planktonic existence. Life-history traits of species in the Cryptasterina group are compared with those of other asterinids in the genus Patiriella with viviparous development. Modifications of life-history traits and pathways associated with evolution of viviparity in the Asterinidae are assessed, and the presence of convergent adaptations and clade-specific features associated with this unusual mode of parental care are examined.

Animals↗
PubMed1984

A new Legionella species, Legionella feeleii species nova, causes Pontiac fever in an automobile plant.

From 15 to 21 August 1981, Pontiac fever affected 317 automobile assembly plant workers. Results of serologic tests were negative for Mycoplasma, Chlamydia, respiratory tract viruses, and previously described legionellae. A gram-negative, rod-shaped organism (WO-44C) that did not grow on blood agar, required L-cysteine for growth, and contained large amounts of branched-chain fatty acids was isolated from a water-based coolant. The organism did not react with antisera against other legionellae, and on DNA hybridization the organism was less than 10% related to other Legionella species. Geometric mean titers found by indirect fluorescent antibody testing to WO-44C were significantly higher in ill employees than in controls (p = 0.0001). Attack rates by department decreased linearly with the department's distance from the implicated coolant system. The etiologic agent apparently was a new Legionella species; we propose the name Legionella feeleii species nova (AATC 35072). This is the first outbreak of nonpneumonic legionellosis in which the etiologic agent is not L. pneumophila, serogroup 1.

Aerosols↗
PubMed2003

Suggesting new species? Comments on "Evidence for a new species of Anopheles minimus from the Ryukyu Archipelago, Japan".

Species recognition and identification are crucial for the planning and evaluation of vector control. In recent years, considerable effort has been made to clarify the species composition of vector taxa. The danger exists, however, that new species are suggested on little evidence and that intraspecific variation is insufficiently surveyed. We discuss these topics on the basis of recent studies on the Anopheles minimus complex, one of the most widespread vector groups in Southeast Asia.

Animals↗
PubMed2004

[Studies on the infection status of seven species Mycoplasma, three species of Chlamydia, Neisseria gonorrhoeae and Garderella vaginalis in 76 patients with sexual transmitted diseases].

OBJECTIVE: To study the infectious status of seven species of Mycoplasma, three species of Chlamydia, Neisseria gonorrhoeae and Garderella vaginalis in the 76 male sexual transmitted disease (STD) patients in Yangzhou city. METHODS: Twelve species of pathogens including Ureaplasma urealyticum (Uu), Mycoplasma hominis (Mh), Mycoplasma pneumoniae (Mpn), Mycoplasma genitalium (Mg), Mycoplasma fermentans (Mf), Mycoplasma penetrans (Mpe), Mycoplasma prium (Mpi), Chlamydia trachomatis (Ct), Chlamydia pneumoniae (Cpn), Chlamydia psittaci (Cps), Neisseria gonorrhoeae (Ng) and Garderella vaginalis (GV) were detected by nested polymerase chain reaction including PPNG. RESULTS: The positive rates of Uu, Mh, Mpn, Mg, Mf, Mpe, Ct, Ng were 64.5%, 27.6%, 26.3%, 18.4%, 2.6%, 2.6%, 31.6%, 36.8%, in which Penicillinase-producing neisseria gonorrhoeae (PPNG) accounted for 14.3%, GV 15.8%. No Mpi, Cpn or Cps were found. There was more significant therapeutic effects on the detectable rate of Mycoplasma nucleic acid between positive gonococcus and negative gonococcus in male STDs patients (chi(2) = 3.848, P < 0.05). CONCLUSION: The infection rates of Mycoplasma, Chlamydia, Ng and GV were high among male STD patients in Yangzhou city. In clinical practice, more attention should be paid on correct diagnosis and treatment for patients, with Gonococcus, Chlamydia, Mycoplasma and GV.

Adult↗
PubMed2001

Revision of the eastern Pacific species of Gobulus (Perciformes: Gobiidae), with description of a new species.

Gobulus birdsongi is described as a new species from the Pacific coast of Panama. The two other known species of Gobulus from the eastern Pacific, Gobulus crescentalis and G. hancocki are redescribed. Gobulus birdsongi differs from other species in the genus in having more numerous second dorsal and anal rays. Gobulus hancocki differs from G. crescentalis in having a much smaller eye. The genus is distinctive in having reversed countershading, with the ventral surface of the body darker than the dorsal surface.

Animals↗
PubMed2006

[Karyotypes of five species in the Drosophila melanogaster species group].

Based on the traditional knocking-slides and Giemsa-staining methods,this paper firstly analyzed the metaphase chromosomes of five species (D. constricta, D. ohnishii, D. ogumai, D. pseudobaimaii and D. tani) of Drosophila melanogaster species group. The results show that all of the five species share the same chromosomal numbers (2n=8) but with different typical shapes. D. pseudobaimaii and D. tani share the shape 2V, 1R, 1D; D. constricta shows 2V,1R,1D with unclear recognized dot chromosomes; D. ohnishii and D. ogumai share the same chromosomal shapes 2V2R. And that between karyotype and phylogenetic relationships are found to be correspond.

Animals↗
PubMed1988

Cross-reactions between Yersinia enterocolitica serogroup 0:3 and other serogroups of the same species, as well as thirty-four other bacterial species.

Cross-reactions between antigens from Yersinia enterocolitica serogroup 0:3 and 5 other members of the same species as well as 34 other bacterial species were studied by means of quantitative immunoelectrophoretic methods. A sonicated Y. enterocolitica antigen preparation and corresponding purified rabbit antibodies were used in a reference system that presented 58 regularly visible immunoprecipitates. One antigen was identified as specific for the Y. enterocolitica 0:3 serogroup and two antigens for the species Y. enterocolitica. Y. enterocolitica antigens cross-reacted widely with antigens from other Enterobacteriaceae, but only a few cross-reactions were registered with Gram-negative bacteria outside the Enterobacteriaceae. A partial cross-reaction between all Gram-positive bacteria included in our study and two Y. enterocolitica antigens was demonstrated.

Antigens, Bacterial↗
PubMed1980

Chromosomal evolution of 19 species of sub-species of Cercopithecinae.

Chromosome analysis by handling techniques of 19 species and sub-species of Cercopithecinae shows an important accumulation of chromosome rearrangements (51). With a clear predominance of fissions (26) and of inversions (17). It is impossible to reconstruct a simple genealogy of these species because chromosomal evolution did not follow the principle of a strict dichotomy. The progressive increase of the number of chromosomes, by fission, corresponds to the inverse of the Robertsonian evolution and suggests the existence of numerous interstitial centromeres and telomeres.

Animals↗
PubMed1981

Unidirectional hybrid male sterility from crosses between species A and species B of the taxon Anopheles (Cellia) culicifacies Giles.

Crosses between species A females and species B males of the taxon Anopheles culicifacies give F1 males with undeveloped testes, reduced vasa deferentia, and apparently normal accessory glands. F1 males from the reciprocal cross, and F1 hybrid females from both reciprocal crosses are fertile, though their fertility is less than that of either parental species

Animals↗
PubMed1996

Molecular differentiation of two new world saurian Plasmodium species in different host species using the polymerase chain reaction.

Several isolates of Plasmodium floridense obtained from naturally infected Anolis carolinensis and Anolis sagrei, and 2 isolates of Plasmodium chiricahuae obtained from Sceloporus jarrovi were characterized at the ribosomal DNA (rDNA) locus using the polymerase chain reaction and agarose gel electrophoresis. Enzymatic amplification of the rDNA locus from both Plasmodium species resulted in the generation of a 590-base pair (bp) DNA fragment. The results obtained with all isolates of P. floridense appeared as a doublet, with the second fragment being approximately 630 bp in size. Isolates of P. floridense obtained from A. carolinensis from ecologically different northern and southeastern Florida, and from A. sagrei a the same southeastern Florida site, were demonstrated to be molecularly similar. Plasmodium floridense and P. chiricahuae were molecularly distinct at the 18s rDNA locus, thus confirming their morphological and morphometrical distinction as taxonomic species. Anolis sagrei is a third natural host species for P. floridense in Florida.

Animals↗