Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “spatial spread”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 397 records · Page 22Linked to original sources

Pattern formation triggered by rare events: lessons from the spread of rabies.

Understanding of large-scale spatial pattern formation is a key to successful management in ecology and epidemiology. Neighbourhood interactions between local units are known to contribute to large-scale patterns, but how much do they contribute and what is the role of regional interactions caused by long-distance processes? How much long-distance dispersal do we need to explain the patterns that we observe in nature? There seems to be no way to answer these questions empirically. Therefore, we present a modelling approach that is a combination of a grid-based model describing local interactions and an individual-based model describing dispersal. Applying our approach to the spread of rabies, we show that in addition to local rabies dynamics, one long-distance infection per 14000 km2 per year is sufficient to reproduce the wave-like spread of this disease. We conclude that even rare ecological events that couple local dynamics on a regional scale may have profound impacts on large-scale patterns and, in turn, dynamics. Furthermore, the following results emerge: (i) Both neighbourhood infection and long-distance infection are needed to generate the wave-like dispersal pattern of rabies; (ii) randomly walking rabid foxes are not sufficient to generate the wave pattern; and (iii) on a scale of less than 100 km x 100 km, temporal oscillations emerge that are independent from long-distance dispersal.

Animals↗

Spatial bridges for the importation of gonorrhea and chlamydial infection.

UNLABELLED: A study of heterosexuals with gonorrhea and/or chlamydial infection in King County, Washington, found that 5.2% of study participants had both local and geographically distant sex partners in the 60 days before diagnosis. Individuals who served as spatial bridges were of higher socioeconomic status and older than other patients. BACKGROUND: Sexual mixing between distant geographic areas (spatial bridging) is important in the spread of antimicrobial resistance and new sexually transmitted disease pathogens. GOAL: The goal was to define the extent of sexual mixing between persons with gonorrhea or chlamydial infection in King County, Washington, and persons outside the Seattle area, and to identify characteristics of persons and partnerships associated with spatial bridging. METHODS: Patients contacted for purposes of partner notification were interviewed regarding demographics, sexual behavior, and the characteristics of their sex partners. RESULTS: Of 2912 participants, 150 (5.2%) were spatial bridgers. Bridgers were of higher socioeconomic status than nonbridgers and more often reported concurrent partnerships. Over a 39-month period, bridgers and potential bridgers linked King County with 35 states and 13 foreign countries. CONCLUSION: Spatial bridging could represent an important channel of transmission between geographic areas. These results highlight the need for linkage of prevention efforts across geographic boundaries.

Adult↗

Spatial-scale contribution to the detection of mirror symmetry in fractal noise.

We investigated how the detection of mirror symmetry depends on the distribution of contrast energy across spatial scales. Stimuli consisted of vertically symmetric noise patterns with fractal power spectra defined by 1/f beta slopes (-2 < or = beta < or = 5). While overall rms contrast remained fixed at 25%, symmetry-detection thresholds were obtained by corrupting the signal with variable amounts of noise with identical spectral characteristics. A first experiment measured thresholds as a function of spectral slope, and performance was found to be substantially facilitated in images with power spectra that characterize natural scenes (1.2 < or = beta < or = 3.2). In a second experiment, symmetry was removed from randomly chosen octave bands and replaced by noise with the same spectral profile. Results revealed that only in images with 1/f2 spectra does performance decrease by constant amounts across all frequency bands. Together, the results imply that symmetry mechanisms extract equal amounts of information from constant-octave frequency bands but lack the ability to whiten stimuli whose spectral slopes differ from those of natural scenes. Results are qualitatively well predicted by a multichannel model that (1) relies on spatial filters with equal-volume point-spread functions and constant-octave frequency bandwidths and (2) restricts the computation of symmetry to spatial regions whose dimensions are proportional to the filters' spatial scale. These findings are also consistent with the notion that mechanisms that mediate the perception of form exploit the ability of early vision to reduce second-order redundancy in natural scenes.

Artifacts↗

Identification of case clusters and counties with high infective connectivity in the 2001 epidemic of foot-and-mouth disease in Uruguay.

OBJECTIVE: To evaluate the influence of individual spatial units (ie, counties) on the epidemic spread of foot-and-mouth disease (FMD) virus. SAMPLE POPULATION: 163 counties in Uruguay where there was an outbreak of FMD between April 23 and July 11, 2001. PROCEDURE: A geographically referenced database was created, and the distance between counties (13,203 county pairs), road density of counties (163 counties), and time when cases were reported in those counties (11 weeks of the epidemic) were considered to assess global spatial and spatial-temporal autocorrelation, determine the contribution of links connecting pairs of counties with infected animals, and allow us to hypothesize the influence for spread during the epidemic for counties with greater than the mean infective link contributions. RESULTS: Case clusters were indicated by the Moran Iand Mantel tests during the first 6 weeks of the epidemic. Spatial lags between pairs of counties with infected animals revealed case clustering before and after vaccination was implemented. Temporal lags predicted autocorrelation for up to 3 weeks. Link indices identified counties expected to facilitate epidemic spread. If control measures had been implemented in counties with a high index link (identifiable as early as week 1 of the epidemic), they could have prevented (by week 11 of the epidemic) at least 2.5 times as many cases per square kilometer than the same measures implemented in counties with average link indices. CONCLUSIONS AND CLINICAL RELEVANCE: Analysis of spatial autocorrelation and infective link indices may identify network conditions that facilitate (or prevent) disease spread.

Animals↗

Parental genome separation and asynchronous centromere division in interspecific F1 hybrids in Lathyrus.

Chromosomes were studied in root-tip metaphase cells of several F1 interspecific Lathyrus hybrids including: L. hirsutus x L. cassius (H x C), L. cassius x L. hirsutus (C x H), L. cassius x L. odoratus (C x O), and their parents, all with 2n = 2x = 14. Two types of morphologically distinct centromeres were identified in the hybrids on the basis of the degree of contraction of the primary constriction. At least 12 well-defined centromeres were seen in all cells of L. hirsutus, L. cassius and L. odoratus, and about 80% of cells had 14. The hybrids were more variable than the species. H x O contained between six and 14 well-defined centromeres, while cells of H x C, C x H and C x O all had seven well-defined and seven weakly defined centromeres. These were used as markers to plot their spatial disposition in two dimensions on metaphase spreads. In H x C, C x H and C x O the two types of centromeres showed a significant tendency to occupy two spatially distinct and concentrically arranged domains on the metaphase plate (P < 0.005). Owing to shortage of material subsequent work was restricted to H x C and C x H. Six or seven chromosomes of one parental genome were selectively labelled by in situ hybridization using biotinylated total genomic DNA from either parent as a probe. Moreover, there was a very strong correlation between centromere type and genomic origin (P < 0.001).(ABSTRACT TRUNCATED AT 250 WORDS)

Centromere↗

Understanding the spatial diffusion process of severe acute respiratory syndrome in Beijing.

OBJECTIVES: To measure the spatial contagion of severe acute respiratory syndrome (SARS) in Beijing and to test the different epidemic factors of the spread of SARS in different periods. METHODS: A join-count spatial statistic study was conducted and the given hypothetical processes of the spread of SARS in Beijing were tested using various definitions of 'joins'. RESULTS: The spatial statistics showed that of the six diffusion processes, the highest negative autocorrelation occurred in the doctor-number model (M-5) and the lowest negative autocorrelation was found in the population-amount model (M-3). The results also showed that in the whole 29-day research period, about hour or more days experienced a significant degree of contagion. CONCLUSIONS: Spatial analysis is helpful in understanding the spatial diffusion process of an epidemic. The geographical relationships were important during the early phase of the SARS epidemic in Beijing. The statistic based on the number of doctors was significant and more informative than that of the number of hospitals. It reveals that doctors were important in the spread of SARS in Beijing, and hospitals were not as important as doctors in the contagion period. People are the key to the spread of SARS, but the population density was more significant than the population size, although they were both important throughout the whole period.

China↗

Programmable dynamic line phantom control: an initial assessment of quantitative potential as a gamma camera test tool.

The dynamic line phantom (DLP) produces various test patterns for the qualitative assessment of gamma camera performance, by stepper motor control of the translatory movement of a radioactive rigid line source. The addition of a V24 serial interface port has allowed external control via an RS-232 connection to a personal computer. Programmability has enabled the DLP to be used as a quantitative test tool. One such program produces a variable contrast 'hot' and 'cold' bar pattern. The addition of a Quick Basic computer program modifies the line source movement to compensate for variation in line source activity. This maintains a test pattern with fixed, absolute contrast levels, giving the potential for the measurement of variations in long-term imaging performance. A modulation transfer function (MTF) pattern has been designed which encompasses a sinusoidally varying intensifying function with a changing spatial frequency component. Repeated measurements on two gamma cameras demonstrated poor reproducibility (CV of up to 50% dependent upon spatial frequency) and significant differences between the MTF obtained from line spread function measurements (percentage deviation of up to 23%, dependent upon spatial frequency). Neither test pattern has been adopted for routine quantitative assessment of gamma camera imaging characteristics. The reproducibility of results is poor (dominated by counting statistic limitations), making the techniques insensitive to small changes in camera performance.

Gamma Cameras↗

Effects of stimulation mode, level and location on forward-masked excitation patterns in cochlear implant patients.

In multi-channel cochlear implants, electrical current is delivered to appropriate electrodes in the cochlea to approximate the spatial representation of speech. Theoretically, electrode configurations that restrict the current spread within the cochlea (e.g., bi- or tri-polar stimulation) may provide better spatial selectivity, and in turn, better speech recognition than configurations that produce a broader current spread (e.g., monopolar stimulation). However, the effects of electrode configuration on supra-threshold excitation patterns have not been systematically studied in cochlear implant patients. In the present study, forward-masked excitation patterns were measured in cochlear implant patients as functions of stimulation mode, level and location within the cochlea. All stimuli were 500 pulses-per-second biphasic pulse trains (200 micros/phase, 20 micros inter-phase gap). Masker stimuli were 200 ms in duration; the bi-polar configuration was varied from narrow (BP+1) to wide (BP+17), depending on the test condition. Probe stimuli were 20 ms in duration and the masker-probe delay was 5 ms; the probe configuration was fixed at BP+1. The results indicated that as the distance between the active and return electrodes in a bi-polar pair was increased, the excitation pattern broadened within the cochlea. When the distance between active and return electrodes was sufficiently wide, two peaks were often observed in the excitation pattern, comparable to non-overlapping electric fields produced by widely separated dipoles. Analyses of the normalized data showed little effect of stimulation level on the shape of the excitation pattern.

Adult↗

The effects of attentional spread and attentional effort on orientation discrimination.

The spatial properties of visual attention and its relation to attentional effort have been investigated, and it has been found that stimulus detectability changes as a function of attentional beam width and degree of task difficulty. Using a matching-to-sample paradigm, two Gabor patches were presented simultaneously both as a sample stimulus and a test stimulus, the stimuli set at three different distances. Task difficulty was gradated by changing the orientation difference of the two Gabor patches on nonmatching trials. 'Difficult' nonmatching probe trials were embedded within an easy block of trials (easy condition), and vice versa for 'easy' probe trials. The detectability, d', differences of probe trials in the two conditions were calculated as a measure of change in attention. Our results show that the detectability of a pair of stimuli decreases with an increase in the distance between stimuli. Furthermore, the results indicate an increase in attentional effort for various attentional beam widths and that r = d'easy/d'difficult of the probe trials is constant throughout the different stimuli separation.

Attention↗

Ultrasonic B-mode image enhancement based on level-dependent spread functions.

The concept of level-dependent spatial summation is applied to the 2-dimensional amplitude distribution comprising an ultrasonic brightness image. The distribution is convolved with a level-dependent kernel. The size (i.e., extent) of the kernel is inversely proportional to the local signal level. The result is a 2-dimensional distribution of Mach bands, accentuating edges and providing useful information for the reduction of speckle. In addition, a small but powerful extension of the processing scheme is presented that supports global edge enhancement and contrast enhancement. The level of improvement has been quantified in terms of an increase in the lesion signal-to-noise ratio on the order of 60 percent. Only two system-dependent parameters have to be supplied for adjustment. The algorithm is rather insensitive to the exact choice of the parameters, making it quite robust. Since only a limited number of simple operations is required for the processing of a frame, the algorithm is expected to be suitable for real time application.

Image Enhancement↗

Spatial properties of horizontal cell responses in the cat retina.

The spatial properties of horizontal cells in the cat retina have been studied by means of intracellular recordings in the optically intact, in situ, eye. The spread of potentials in the horizontal cell layer and the spatial summation properties have been investigated using "white light" stimuli in several different configurations. Area-response curves were measured with flashing spots carefully centered on the receptive field. The lateral spread of potentials was studied using long, narrow slits of light and circular spots of different sizes at different positions in the receptive field. Two-dimensional receptive field profiles showed that the receptive field structure was, both on a large scale and at higher resolutions, relatively homogeneous and isotropic. The size and shape of the receptive fields have been characterized by applying a simplified version of the model proposed by Naka and Rushton (1967) of electrical coupling in the horizontal cells layer in fish. Results show that the model describes the variation of response amplitude reasonably well both as a function of spot size and spot or slit position. However, deviations were found for area-response curves measured at higher light intensities and for receptive field profiles measured with relatively small spots. Furthermore, the estimated length constants resulting from the different experiments were not in agreement. Different model parameters were needed in order to describe the spatial summation properties and the lateral spread of potentials respectively. It is concluded that passive electrical spread and linear summation of potentials cannot account for the observed spatial properties.

Action Potentials↗

A quantitative analysis of cortical spreading depression events in the feline brain characterized with diffusion-weighted MRI.

Cortical spreading depression (CSD) in the gyrencephalic cat brain was detected with diffusion-weighted echoplanar (DWEP) magnetic resonance imaging (4-8/min for 1-2 hours) using a horizontal imaging plane through the suprasylvian (SG) and marginal gyri. A t-statistic mapping technique allowed a quantitative characterization of the passage of events through single-image pixels (0.15 mm(2)), thus providing a resolution unavailable to previous studies in which time-dependent changes instead were derived from averaging data over relatively large ROIs. Using the enhanced analysis, CSD events initiated by KCl could be quantified for the first time as primary or secondary according to their spatial and temporal features. Primary events covered 26.2 +/- 9.9 mm(2)of cortical surface (mean +/- SD, n = 7 experiments) and propagated rapidly (3.5 +/- 0.65 mm * min(-1)) with a hemispherical geometry. In contrast, the subsequent secondary events were multiple, spatially restricted (covering 7.6 +/- 4.6 mm(2), P < 0.005), slower in propagation (2.6 +/- 0.41 mm * min(-1), P < 0.012), and often confined to the originating gyrus (26 out of 59 events). However, both event types were associated with significantly reduced apparent diffusion coefficients (ADCs; from 800 to approximately 660 x 10(-6) mm(2)* s(-1), P < 0.05) that were similar for both primary (21 +/- 5.1%) and secondary waves (18 +/- 7. 7%) and that had similar durations (full width at half-maximal height: 86 +/- 17 vs. 79 +/- 20 seconds, respectively). These findings associate CSD for the first time with two categories of ADC disturbance that are similar in amplitude and duration but that differ in spatial extent, velocity, and extensiveness of spread.

Animals↗

Does the neuropathology of human patients with variant Creutzfeldt-Jakob disease reflect haematogenous spread of the disease?

To test the hypothesis that the distribution of the pathology in variant Creutzfeldt-Jakob disease (vCJD) represents haematogenous spread of the disease, we studied the spatial correlation between the vacuolation, prion protein (PrP) deposits, and the blood vessel profiles in the cerebral cortex, hippocampus, dentate gyrus, and cerebellum of 11 cases of the disease. In the majority of areas, there were no significant spatial correlations between either the vacuolation or the diffuse type of PrP deposit and the blood vessels. By contrast, a consistent pattern of spatial correlation was observed between the florid PrP deposits and blood vessels mainly in the cerebral cortex. The frequency of positive spatial correlations was similar in different anatomical areas of the cerebral cortex and in the upper compared with the lower laminae. Hence, with the exception of the florid deposits, the data do not demonstrate a spatial relationship between the pathological features of vCJD and blood vessels. The spatial correlation of the florid deposits and blood vessels may be attributable to factors associated with the blood vessels that promote the aggregation of PrP to form a condensed core rather than reflecting the haematogenous spread of the disease.

Adult↗

[Location of atrial and ventricular insertions of accessory atrioventricular pathways using surface ECG mapping and its importance in catheter ablation therapy].

BACKGROUND: The modern non-pharmacological therapy of the WPW syndrome by means of catheter ablation is based on the interruption of the accessory pathway(-s) by radiofrequency current energy. Destruction of the morphologic substrate of the arrhythmia alters the activation wave spread in the heart. OBJECTIVES: It was the aim of this report to demonstrate the diagnostic potential of BSM in localizing both overt and concealed accessory pathways. Presented study analyzes the alterations of the cardioelectric field by means of body surface ECG mapping in two female patients with accessory pathways before and after their successful curative treatment by radiofrequency catheter ablation. METHODS: Five patients were analyzed prior and after RF catheter ablation by BSM, two of them were selected for this presentation. One patient with WPW syndrome suffered from frequent supraventricular tachycardia due to in one female patient with an overt accessory pathway. The other patient was for several years incessantly in permanent junctional reentry tachycardia due to a concealed accessory pathway. The examination comprised 12-lead ECG, orthogonal vectorcardiogram according to Frank, BSM using a regular 80-electrode-array system and signal-averaged ECG. RESULTS: The RF ablation was successful in both patients and their arrhythmia was abolished. By means of a detailed analysis of the ventricular activation prior RF ablation in the patient with WPW syndrome the precise site of the ventricular insertion of the accessory pathway in the left lateral free wall was predicted. Furthermore, alterations of the terminal QRS complex were observed when comparing pre- versus post-ablation maps. In the second patient the atrial insertion of the accessory pathway with retrograde and decremental conduction was successfully localized to the right septal region by means of pre-ablation BSM. CONCLUSIONS: Both ventricular and atrial activation can be in detail analyzed by means of BSM. Such analysis offers more precise information on the spatial component of the activation wave spread. This case report gives further evidence that BSM is a useful method for precise localization of both ventricular and atrial insertion sites of accessory pathways in patients with paroxysmal tachycardias due to this electrophysiologic abnormality. This information gained recently clinical impact since it can be directly used for faster arrhythmogenic substrate targeting during ablation therapy. (Fig. 5, Ref. 17.)

Adolescent↗

A constrained Gauss-Seidel method for correction of point spread function effect in MR spectroscopic imaging.

Magnetic resonance spectroscopic imaging is limited by a low signal-to-noise ratio, so a compromise between spatial resolution and examination time is needed in clinical application. The reconstruction of truncated signal introduces a Point Spread Function that considerably affects the spatial resolution. In order to reduce spatial contamination, three methods, applied after Fourier transform image reconstruction, based on deconvolution or iterative techniques are tested to decrease Point Spread Function contamination. A Gauss-Seidel (GS) algorithm is used for iterative techniques with and without a non-negative constraint (GS+). Convergence and noise dependence studies of the GS algorithm have been done. The linear property of contamination was validated on a point sample phantom. A significant decrease of contamination without broadening the spatial resolution was obtained with GS+ method compared to a conventional apodization. This post-processing method can provide a contrast enhancement of clinical spectroscopic images without changes in acquisition time.

Algorithms↗

Functional anatomy of macaque striate cortex. II. Retinotopic organization.

Macaque monkeys were shown retinotopically-specific visual stimuli during 14C-2-deoxy-d-glucose (DG) infusion in a study of the retinotopic organization of primary visual cortex (V1). In the central half of V1, the cortical magnification was found to be greater along the vertical than along the horizontal meridian, and overall magnification factors appeared to be scaled proportionate to brain size across different species. The cortical magnification factor (CMF) was found to reach a maximum of about 15 mm/deg at the representation of the fovea, at a point of acute curvature in the V1-V2 border. We find neither a duplication nor an overrepresentation of the vertical meridian. The magnification factor did not appear to be doubled in a direction perpendicular to the ocular dominance strips; it may not be increased at all. The DG borders in parvorecipient layer 4Cb were found to be as sharp as 140 micron (half-amplitude, half width), corresponding to a visual angle of less than 2' of arc at the eccentricity measured. In other layers (including magnorecipient layer 4Ca), the retinotopic borders are broader. The retinotopic spread of activity is greater when produced by a low-spatial-frequency grating than when produced by a high-spatial-frequency grating. Orientation-specific stimuli produced a pattern of activation that spread further than 1 mm across cortex in some layers. Some DG evidence suggests that the spread of functional activity is greater near the foveal representation than near 5 degrees eccentricity.

Animals↗

Genetics of mutualism: the evolution of altruism between species.

Conditions are analyzed under which natural selection favors an individual to help another species at a cost to its own reproduction. Traditional models for the evolution of altruism between species focus on the genetic relatedness between the original donor and the recipients of return benefits from the mutualistic partner species. A more general model is analyzed here that focuses on the synergistic effects between partner species caused by genetic variability. The model shows that the spread of altruism is enhanced by spatial correlations between species in the genetic tendency to give aid to partners. These spatial correlations between species are similar to the kin selection coefficients of relatedness that determine the course of social evolution within species. The model also shows that natural selection and ecological dynamics can create genetic correlations between neighbors of different species, even when the initial spatial distributions of the species are uncorrelated. Genetic correlations between species may play an important role in the origin and maintenance of altruism between species.

Altruism↗

MEG and ECoG localization accuracy test.

We tested the localization accuracy of magnetoencephalography (MEG) and electrocorticography (ECoG) for a current dipole in a saline filled sphere at depths ranging from 1 to 6 cm at 1 cm intervals. We used standard neuromagnetometer placements and subdural electrode grids, previously employed for patient studies, with precise measurements of sensor and electrode locations with a 3-dimensional spatial digitizer. MEG and ECoG had comparable accuracy with mean errors of 1.5 and 1.8 mm, respectively. It appears that use of the spatial digitizer increases accuracy for both MEG and EGoG localizations. The larger errors in the ECoG with increasing depths could be attributed to under-sampling of the spatial pattern of the field which spreads out with deeper sources. It should be noted that in clinical applications a grid of the dimensions used here would most typically be used for superficial sources on the cortex with depth recordings being preferred for investigations of deep epileptogenic activity. Results are encouraging for continued development of non-invasive MEG methods for further definition of epileptogenic zones in the brain.

Cerebral Cortex↗