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Use of a modified cupric acetate method for the detection and quantitation of xylanolytic activities: a comparative study with the congo red method.

A modified cupric acetate method for the screening and quantitation of xylanolytic activities was comparable with the more widely used congo red method with respect to sensitivity and ease of use and was shown to have points of merit over the latter. The use of a non-linear correction, in comparison to the conventional linear one, for the effect of dilution on the quantitative plate assay was evaluated.

Bacillus↗

Root cortex--the final frontier for the biocontrol of root-rot with fungal antagonists: a case study on a sterile red fungus.

Root cortices remain as the last frontier for the biocontrol agents to protect the vascular elements from the invader, where the virulent pathogen has breached the bulk soil, rhizosphere, and rhizoplane. Root cortices are commonly colonized by a variety of soilborne fungi. Many nonmycorrhizal biocontrol fungi that occupy the rhizosphere appear to extend their activity into the live cells of the cortex. It has been proposed that the occupation of the cortices by biocontrol fungi introduced on seed at sowing could extend their activity in time and space. The biology and ecology of such fungi with parasitic competency to colonize live cortical cells are discussed in relation to a case study involving a sterile cortical fungus.

Journal Article↗

Evaluation of tissue and cellular biomarkers to assess 2,4,6-trinitrotoluene (TNT) exposure in earthworms: effects-based assessment in laboratory studies using Eisenia andrei.

The lysosomal neutral red retention time (NRRT) assay, a biomarker for lysosomal membrane stability, and the total immune activity (TIA) assay, a measure of non-specific immune system activity, were used in laboratory studies to assess the toxic effects of 2,4,6-trinitrotoluene (TNT) on earthworms (Eisenia andrei) in vivo. The results were compared with the concentration of TNT and its metabolites in earthworm tissue, as well as standard sublethal toxicity endpoints including growth (i.e. weight change) and reproduction effects from previously published studies. Filter paper experiments indicated a significant decrease in NRRT at >or=1.8 micro g TNT cm(-2), whereas sublethal (weight loss) and lethal effects to earthworms were detected at >or=3.5 and 7.1 micro g TNT cm(-2), respectively. Experiments in artificial soil showed that NRRT effects could be detected at lower TNT concentrations (>or=55 mg TNT kg(-1) soil dry weight) compared with other sublethal endpoints (effects on growth and reproduction). The TIA biomarker did not significantly respond to TNT. Copper (as CuSO4, filter paper contact tests) and 2-chloroacetamide (soil tests), which were used as reference toxicants, also decreased the NRRT. The use of the NRRT assay linked with tissue concentrations of TNT metabolites in earthworms was identified as a potentially appropriate biomarker approach for TNT exposure assessment under laboratory conditions and a novel tool for effects-based risk assessment.

Animals↗

Spectrophotometric determination of vanadium(V) in minerals, steels, soil and biological samples using phenothiazine derivatives.

Two simple, rapid and sensitive spectrophotometric methods have been proposed for the determination of vanadium(V) using butaperazine dimaleate (BPD) and propionyl promazine phosphate (PPP). These methods are based on the formation of red-colored radical cations on reaction with vanadium(V) in phosphoric acid medium, with their absorbance maxima at 513 nm. Beer's law is valid over the concentration range of 0.25-5.0 micrograms ml-1 and 0.2-4.0 micrograms ml-1, with Sandell's sensitivity values of 6.1 ng cm-2 and 6.0 ng cm-2 for BPD and PPP respectively. The proposed methods have been successfully applied to the analysis of vanadium steels, minerals, biological samples and soil samples.

Humans↗

Development of gfp Vectors for Expression in Listeria monocytogenes and Other Low G+C Gram Positive Bacteria.

The gfp (green fluorescent protein) gene has previously been used to construct a variety of reporter plasmids for Gram-positive bacteria for bacterial localization and gene expression studies. When a native red-shifted gfp variant (gfp3) was cloned into an expression vector using the Pxyn promoter and used to transform the soil-borne pathogen Listeria monocytogenes, only a small proportion of the population was seen to fluoresce when examined by epifluorescence microscopy. When the Pxyn promoter was replaced with the PxylA promoter, with accompanying modification of the translation initiation region of the gfp3 gene, a homogeneously fluorescent population of cells was obtained. When expressed in other Gram-positive organisms, such as Staphylococcus aureus and Bacillus subtilis, the translationally enhanced gene also resulted in high-level and homogeneous GFP production within the bacterial population. High-level expression of these reporter constructs in L. monocytogenes was evaluated to determine if it had any detrimental biological effect during intracellular infection of eukaryotic cell lines. The gfp3+ Listeria were found to invade equally as well as the wild-type cells; showing that these expression systems can be used to monitor the bacterium in natural environments. Based on these results, similar translationally enhanced vectors were also developed using unstable GFP3 variants, which retain their short-half life characteristics in L. monocytogenes and therefore can be used as a sensitive monitor of gene expression.

Journal Article↗

Factors affecting the selenium intake of people in Transbaikalian Russia.

The selenium concentration in foods grown and consumed and in plasma, red blood cells, and toenails of people living in the district of Chita in the transbaikalian part of Russia were studied in August 1991. Preliminary results from the area have suggested low selenium intakes and the possible occurrence of cardiomyopathy (Keshan disease) in the population. A low selenium concentration in foods grown locally was found: mean selenium concentration in wheat grains was 1, 5, and 28 micrograms/kg, respectively, in three villages studied, that of oats was between 3-6 micrograms/kg, and of cow's milk 10-27 micrograms/kg dry matter. The selenium concentration of bread was considerably higher, between 87-337 micrograms/kg dry wt, presumably because wheat imported from the US had been used for baking. Occasional samples of pork, beef, and mutton contained between 32-218 micrograms selenium/kg dry wt. Low selenium concentrations were observed in samples of soil and river water. The mean plasma selenium concentration of 52 persons was 1.02 mumol/L, including 33 children and 19 adult subjects. The selenium concentrations in red blood cells and toenails were 1.95 mumol/L and 0.61 mg/kg, respectively. No symptoms of heart disease caused by selenium deficiency were observed. It is concluded that the selenium status of people was fairly good thanks to the contribution to dietary intake of imported wheat with a high selenium content. As the selenium concentration was very low in foods grown in the area, the selenium intake of the population will be reduced to a very low level if only locally produced foods are consumed.

Adolescent↗

Selenate reduction by bacteria from a selenium-rich environment.

Samples collected from Kesterson Reservoir were screened for bacterial presence and selenate reduction capability. Selenate concentrations of 100 mg/liter were not toxic to indigenous bacteria. Of the 44 samples collected, 20 possessed microbial populations capable of reducing selenate. Reduction was observed in 4% of the water samples, 92% of the sediment samples, and 100% of the soil samples. Microbial reduction of 100 mg of selenate per liter was complete within 1 week of incubation. Up to 75 mg of selenate per liter was reduced beyond selenite to an insoluble red precipitate. Data collected indicate that indigenous bacteria have a significant role in the biogeochemical cycling of selenium.

Bacteria↗

Phenological modifications in plants by various edaphic factors.

Various mechanical, chemical and physical soil analyses were carried out, in addition to weather observations, for 3 years at several sites along an oceanic-continental gradient in a fjord district in western Norway. All the environmental factors observed were correlated with the spring and a few late-season phenophases of many native and cultivated woody plants and some herbs by simple, linear correlations and by stepwise multiple and partial analyses. Different techniques were used to try and eliminate many intercorrelations between various environmental factors. As expected, air temperature measurements in nearly all analyses from these temperate region districts gave the most significant correlations with the phenology of the plants, the temperature during the night generally being the most important in mainly vegetative periods, e.g. to leaf bud break in spring, and the temperature during the day affecting the more generative phases, such as the period between leaf bud break and flowering. The other environmental factors, however, showed strong variation in correlation significance among the various species studied and also with different phenophases of the same species. Various hypotheses are put forward to explain such variation. Air humidity (including precipitation) and/or soil moisture (including intercorrelated parameters, e.g. soil grain size and bulk density) were relatively often found to be of importance. In the stepwise multiple analyses for leaf bud break of the birch (Betula pubescens), for instance, the amount of precipitation was the second factor to enter the analyses by a positive correlation with the developmental rate, after the most important factor, the night temperature. Positive correlations with a high clay content and bulk density in the soil indicated that high soil moisture is also favourable for early bud break in the birch. Other phenophases that seemed to be favoured by a good water supply were leaf bud break of the bird cherry (Prunus padus) and rowan (Sorbus aucuparia), and flowering of the hazel (Corylus avellana), common lilac (Syringa vulgaris), plum ('Victoria') and currant ('Red Dutch') and also, to some degree, the goat willow (Salix caprea). The amount of ions (P, K, Mg and Ca) often showed negative correlations with the developmental rate, particularly of earlier phenophases of both native and cultivated plants (except for the apple 'Gravenstein' and pear 'Moltke'), possibly, indicating that a high nutrient level delayed plant development. A similar explanation might be given for the observation that high pH in the soil often seemed to delay plant development (leaf bud break of Betula, Sorbus, Syringa and plum, and flowering of Corylus, bluebell (Campanula rotundifolia) and red currant). According to the analyses there seemed to be a tendency for plants that are particularly dependent on warm weather for leaf bud break, e.g. the ash (Fraxinus excelsior), and flowering, e.g. Prunus, pear, apple and, to some degree, the raspberry ('Preussen'), to be less dependent on other environmental factors for their development. For instance, if there were any effects of water for these plants, they were negative for moisture and soil factors intercorrelated with water.

Acclimatization↗

[Thermophilic bacteria, Thermus ruber, that produce a bright orange pigment].

A non-sporeforming gram-negative bacterium isolated from soils of Africa was shown to belong to the species Thermus ruber in its morphologo-cytological and physiologobiochemical properties. It differed from the Thermus ruber species described elsewhere (Loginova et al., 1975; Loginova and Egorova, 1975) only on colour: the former contained a bright-red pigment while the latter produced bright-orange pigments.

Pigments, Biological↗

Soil activity and persistence of sulcotrione and mesotrione.

Greenhouse bioassays were set up using a small pot test method to determine the intrinsic sensitivity of different plant species to sulcotrione and mesotrione applied in a sandy loam soil. Herbicides were applied over an appropriate concentration range. After a 2-3 week test period, foliage fresh weight was determined. Data were subjected to a non-lineair regression analysis. Using the regression equations, ED50-values (herbicide concentrations that cause 50 percent foliage fresh weight reduction) were calculated for each combination of crop species and herbicide. To determine which replacement crops might be grown in case of failure of a crop treated with one of these herbicides, field persistence experiments were conducted over the 1993-2003 period for sulcotrione and the 1998-2003 period for mesotrione at the Experimental Farm, Biocentre Agri-Vet, Ghent University at Melle. Herbicides were applied in spring (about mid-March) on a bare soil; untreated control strips were included. Replacement crops were sown or planted approximately five weeks after herbicide applications. Visual estimations of crop injury were recorded at several intervals from sowing and fresh matter yield of plant parts was determined. Based on these data, crops were ranked according to their degree of sensitivity to either sulcotrione or mesotrione. Maize is very tolerant to both herbicides, although in some years, temporary injury could be seen in the field experiments. Italian rye-grass and fibre flax are tolerant crops; in field experiments a slight, temporary injury could be noticed in some years. Winter wheat displayed a high degree of tolerance to mesotrione (in both experiment types): however this crop was less tolerant to sulcotrione especially in the bioassay experiment. Based on its ED50-value, black salsify is tolerant to sulcotrione but under field conditions, the selectivity of this herbicide is quite variable; tolerance to mesotrione is moderate. Turnip and witloof chicory are clearly sensitive to mesotrione and sulcotrione whereas sugar beet, red clover and lettuce are extremely sensitive to both herbicides in both experiment types. Bioassays and field experiments provide a detailed and complete information about soil activity and persistence of both herbicides.

Belgium↗

Transfer of cadmium, lead, and zinc from industrially contaminated soil to crop plants: a field study.

The documeneed adverse health effects of soil Cd and Pb have led to public concern over soil contamination with metals. A 4-year field experiment was conducted to study the transfer of Cd, Pb, and Zn from soil contaminated by smelter flue-dust to crop plants grown in a rotation. The soil was amended with Pb?Zn smelter flue-dust (2-66.8 kg per 10 m(2) plot) to simulate the long-term effect that the smelting of non-ferrous metal ore has on arable soils. The treated soil became strongly contaminated with metals (Cd 3.2-106 mg/kg, Pb 146-3452 mg/kg, Zn 465-11 375 mg/kg). Concentrations of Cd, Pb, and Zn in barley grain, barley straw meadow bluegrass, red clover, and potatoes were generally low. The highest metal concentrations were found in potato tubers (intact), meadow bluegrass, and barley straw. The observed reduction in crop yield was probably the result of possible nutrient imbalances rather than of metal (Zn, Cu) phytotoxicities. Zn and Cd uptake by the plants can be described by the saturation (plateau) model (y = ax(b), b < 1). The relationship between Pb in the soil and plants was linear with an extremely low slope (0.0001-0.0003). No excessive dietary intake of Cd is expected when Cd concentrations in barley grain and potato tubers grown on the contaminated soil are not higher than 0.6 and 1.0 mg/kg, respectively. Based on the risk analysis and taking into account the saturation model of the soil-plant metal relationship, it was concluded that, under the conditions of this experiment (neutral soil pH), soil with Cd concentrations of up to 30 mg/kg is still safe for production of these crop plants.

Journal Article↗

[Taxonomy of 1043 strain producing actinospectacin].

Streptomyces strain 1043 was isolated from a soil sample collected in Hangzhou. The strain may produce two antibiotics--Actinospectacin and Streptovaricin. Its aerial mycelia are apricot orange to carnelian red on most media. An outstanding characteristic of 1043 strain is the development of pigment granules in both vegetative and aerial mycelia. Its culture and physiological characteristicus were found to resemble those of Streptomyces spectabilis. Streptomyces strain 1043 was named Streptomyces spectabilis 1043.

China↗

[Application of terrestrial invertebrates biomarkers in soil pollution ecology study].

Biomarkers in terrestrial invertebrates play an important role in estimating either exposure or resultant effects of pollutants in soil ecosystem, which has received increasing attention and made significant progress. The present paper has drawn three important biomarkers, i.e., lysosomes, stress protein and mettllothioneins (MTs). The lysosomal membrane stability of coelomocytes was assayed as neutral-red retention time (NRR-time) resulting from toxicant stress. Hsp70 and Hsp60 were commonly used in the stress protein families. The quantification methods of different isofoms of the mettllothioneins could specifically indicate different metal contamination. The rationale, characteristics, and relevant exemplary case of assaying the biomarkers and their promising application to ecotoxicological diagnosing in soil contamination were discussed.

Animals↗

Long-term survival and germination of Bacillus thuringiensis var. kurstaki in a field trial.

Long-term survival, dispersal, and germination of Bacillus thuringiensis var. kurstaki DMU67R has been investigated in a field trial. An experimental cabbage plot was sprayed with DMU67R in 1993 and allowed to lie fallow since. The investigations reported here were carried out from 1997 to 2000 in this plot. High persistence of DMU67R for 7 years in the bulk soil of the plot has been demonstrated. The numbers have not significantly reduced since 1994, stabilizing around 6.6 x 10(2) cfu/g from 1996 to 2000. Horizontal dispersal of DMU67R in the 1994-1999 period was limited. Vertical dispersal occurred from 1994 to 1999, as 77% of the population of DMU67R occurred in the 0-2 cm layer in 1994, while only 22% of the population was found there in 1999. Most of the population in 1999 was present homogeneously in the upper 6 cm of the soil profile. Germination, as evidenced by the ratio of DMU67R cfu before and after heat treatment, was not observed in the bulk soil. However, in the rhizospheres of dandelion (Taraxacum officinalis) and quackgrass (Agropyron repens), 40 and 50% of DMU67R was present as vegetative germinated cells, respectively. No germination occurred in the rhizosphere of red fescue (Festuca rubra). The material from the gut of the earthworm species Lumbricus rubellus, Lumbricus terrestris, and Apporrectodea caliginosa and from a tipulid larvae from the plot also contained vegetative cells of DMU67R. Further investigations of A. caliginosa showed that germination seemed to be restricted to the gut and that sporulation occurred after defecation. The germination of DMU67R in rhizospheres and in the gut of nontarget invertebrates suggests that survival in the soil of B. thuringiensis is a dynamic process involving germination, cell divisions, and sporulation in specific microhabitats.

Animals↗

Caesium concentration factors in wild herbivores and the fox (Vulpes vulpes L).

A selection of wild animals was sampled in the winter of 1986/87. The sites chosen for sampling were based on information obtained from survey carried out by The Institute of Terrestrial Ecology in the spring and autumn of 1986. Animals included deer, grouse, hares and rabbits, and foxes which were collected as a top carnivore in the food chain. Variation in concentration of caesium between species from the same area was unpredictable; rabbits, for instance, never exceeded 200 Bq kg(-1) (fresh wt) of (137)Cs in their flesh, even when adjacent to deer forests with over 1000 Bq kg(-1) in the venison. The greatest complication grose from areas of peaty uplands where the pre-Chernobyl (137)Cs from weapons-testing was much higher than expected. This pre-Chernobyl contribution amounted to 630 Bq kg(-1) in a red grouse from the Pennines, and 650 Bq kg(-1) in a roe deer from near the Borders, being c. 60% of the total. Concentration factors were calculated using values from freshly ingested vegetation and tissues from individual animals. Significant differences in concentration factors were found depending on species, food, sex, breeding condition and age. Contrasting the decrease of the two caesium isotopes in roe deer from forestry on peat with those from woodlands on mineral soils, it appeared that after an initial fall in concentration, the only decrease thereafter occurred on the mineral soils. Nowhere were radiocaesium concentrations high enough to cause concern amongst consumers of game and other wild animals, even when levels exceed 3000 Bq kg(-1) (fresh wt) as they did in red deer, red grouse and the blue hare.

Journal Article↗

Occupational lead poisoning, animal deaths, and environmental contamination at a scrap smelter.

Occupational lead poisoning and environmental contamination were evaluated at a lead scrap smelter. Thirty of 37 employees (81 per cent) has blood lead levels of greater than or equal to 80 mug/100 ml, indicating unacceptable absorption, and 35 had free erythrocyte protoporphyrin (FEP) levels greater than 60mug/100ml rbc, indicating toxicity of lead on heme metabolism in red blood cells; eight current and previous employees had been hospitalized with lead colic, and another with encephalopathy. Levels of lead in surface soil (1,800 ppm) and vegetation (20,000 ppm) at the smelter were high and decreased with distance. Animals on nearby pasture had died, and lead levels in the blood, milk, and hair of large and small animals were elevated. Adults living within 100 meters of the smelter had higher blood and hair lead levels than controls, who lived at greater distances, but there was no evidence in them of lead toxicity.

Alabama↗

Modeling changes in red spruce carbon balance and allocation in response to interacting ozone and nutrient stresses.

The simulation model TREGRO was developed to analyze the response of red spruce saplings to multiple stresses, such as drought, nutrient deficiency, and exposure to pollutants. The model provides a method of identifying changes in structural and non-structural carbon resources in the tree that may become measurable only after many years of exposure. The model is based on the assumption that the ability of plants to take up and use carbon, water, and nutrients depends on the interrelationships in availability among the three resources. Consequently, the model simulates the simultaneous cycling of these resources. In the model, the tree is divided into the following compartments: a canopy of leaves grouped by age class, branches, stem, and coarse and fine roots in a number of soil horizons. In each of these compartments we track three carbon pools: living structure, dead structure or wood, and total non-structural carbohydrate. The model calculates the photosynthesis of an entire red spruce tree each hour as a function of ambient environmental conditions and the availability of light, water, and nutrients; the daily redistribution of carbon throughout the plant; and the loss of carbon by respiration and senescence. To accomplish this task, the model tracks the flow of carbon dioxide to the sites of fixation within the leaves, the availability of light in the canopy, water and nutrient resources in each of three soil horizons, and the amounts of these resources taken up by the tree. Soil and plant water potentials, photosynthesis, and leaf respiration are simulated on an hourly timestep; nutrient uptake, allocation and growth are computed on a daily timestep. Through a set of example simulations, we demonstrate how the model can be used to examine the mechanisms by which plants respond to stresses experienced alone and in combination. The model was used to predict the growth decrease and the shifting pattern of carbon allocation expected for an isolated tree exposed to ozone and decreased nutrient availability due to acidic deposition. Decreased nutrient availability resulted in decreased growth and preferential carbon allocation to roots, which helped to alleviate the nutrient stress. Ozone stress also resulted in decreased plant growth but had the opposite effect on allocation patterns, with most of the growth reduction occurring in roots. The effect of simultaneous ozone and nutrient stress on tree growth was less than the sum of the independent single stresses, contrary to our expectation. This modeling approach can aid in evaluating the long-term effect of stress on resource availability, the potential for gradual deterioration of tree health under long periods of stress, and imbalances in growth accompanying shifts in carbon allocation caused by stress.

Journal Article↗

Environmental hazards of aluminum to plants, invertebrates, fish, and wildlife.

Aluminum is extremely common throughout the world and is innocuous under circumneutral or alkaline conditions. However, in acidic environments, it can be a major limiting factor to many plants and aquatic organisms. The greatest concern for toxicity in North America occurs in areas that are affected by wet and dry acid deposition, such as eastern Canada and the northeastern U.S. Acid mine drainage, logging, and water treatment plant effluents containing alum can be other major sources of Al. In solution, the metal can combine with several different agents to affect toxicity. In general, Al hydroxides and monomeric Al are the most toxic forms. Dissolved organic carbons, F, PO(3)3- and SO(4)2- ameliorate toxicity by reducing bioavailability. Elevated metal levels in water and soil can cause serious problems for some plants. Algae tend to be both acid- and Al tolerant and, although some species may disappear with reduced pH, overall algae productivity and biomass are seldom affected if pH is above 3.0. Aluminum and acid toxicity tend to be additive to some algae when pH is less than 4.5. Because the metal binds with inorganic P, it may reduce P availability and reduce productivity. Forest die-backs in North America involving red spruce, Fraser fir, balsam fir, loblolly pine, slash pine, and sugar maples have been ascribed to Al toxicity, and extensive areas of European forests have died because of the combination of high soil Al and low pH. Extensive research on crops has produced Al-resistant cultivars and considerable knowledge about mechanisms of and defenses against toxicity. Very low Al levels may benefit some plants, although the metal is not recognized as an essential nutrient. Hyperaccumulator species of plants may concentrate Al to levels that are toxic to herbivores. Toxicity in aquatic invertebrates is also acid dependent. Taxa such as Ephemeroptera, Plecoptera, and Cladocera are sensitive and may perish when Al is less than 1 mg.L-1 whereas dipterans, molluscs, and isopods seem to be tolerant. In Al-sensitive species, elevated levels (approximately 500 micrograms.L-1) affect ion regulation and respiratory efficiency. Toxicity tends to be greatest near a species' threshold of pH sensitivity. At lower pHs, Al may have a slight ameliorative effect by interfering with H+ transport across membranes. Aquatic invertebrates can accumulate very high levels of Al, but most of this appears to be through adsorption rather than assimilation. Aluminum concentrations may be as high as 5000 mg.kg-1 in insects and greater than 17,000 mg.kg-1 in other invertebrates.(ABSTRACT TRUNCATED AT 400 WORDS)

Aluminum↗