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PubMed2006

The ER-peroxisome connection in plants: development of the "ER semi-autonomous peroxisome maturation and replication" model for plant peroxisome biogenesis.

The perceived role of the ER in the biogenesis of plant peroxisomes has evolved significantly from the original "ER vesiculation" model, which portrayed co-translational import of proteins into peroxisomes originating from the ER, to the "ER semi-autonomous peroxisome" model wherein membrane lipids and post-translationally acquired peroxisomal membrane proteins (PMPs) were derived from the ER. Results from more recent studies of various plant PMPs including ascorbate peroxidase, PEX10 and PEX16, as well as a viral replication protein, have since led to the formulation of a more elaborate "ER semi-autonomous peroxisome maturation and replication" model. Herein we review these results in the context of this newly proposed model and its predecessor models. We discuss also key distinct features of the new model pertaining to its central premise that the ER defines the semi-autonomous maturation (maintenance/assembly/differentiation) and duplication (division) features of specialized classes of pre-existing plant peroxisomes. This model also includes a novel peroxisome-to-ER retrograde sorting pathway that may serve as a constitutive protein retrieval/regulatory system. In addition, new plant peroxisomes are envisaged to arise primarily by duplication of the pre-existing peroxisomes that receive essential membrane components from the ER.

Endoplasmic Reticulum↗
PubMed2004

Medicinal plant diversity in the flora of Saudi Arabia 1: a report on seven plant families.

A preliminary survey on the medicinal plant diversity in the flora of the Kingdom of Saudi Arabia has been made with seven families: Amaranthaceae, Apocynaceae, Capparidaceae, Euphorbiaceae, Labiatae, Polygonaceae and Solanaceae, as an initial study. These families are represented in the flora with 254 species (i.e. 12% of the total species), and individually with 21, 7, 29, 66, 76, 22 and 33 species, respectively. Of these, 86 species, so far investigated, are medicinal, distributed in these seven families as follows: 7, 5, 12, 20, 23, 7 and 12, respectively. The Labiatae have the highest number (23) of medicinal plants among them while maximum medicinal plant diversity within the family has been observed with the Apocynaceae. An enumeration of these 86 medicinal species is presented with the current nomenclature, Arabic names and medicinal uses. This communication aims at emphasizing the importance of setting up conservation priorities, and sustained development of various medicinal plants of Saudi Arabia.

Humans↗
PubMed2005

Soil-to-plant halogens transfer studies 2. Root uptake of radiochlorine by plants.

Long-term field experiments have been carried out in the Chernobyl exclusion zone in order to determine the parameters governing radiochlorine (36Cl) transfer to plants from four types of soil, namely, podzoluvisol, greyzem, and typical and meadow chernozem. Radiochlorine concentration ratios (CR) in radish roots (15+/-10), lettuce leaves (30+/-15), bean pods (15+/-11) and wheat seed (23+/-11) and straw (210+/-110) for fresh weight of plants were obtained. These values correlate well with stable chlorine values for the same plants. One year after injection, 36Cl reached a quasi-equilibrium with stable chlorine in the agricultural soils and its behavior in the soil-plant system mimicked the behavior of stable chlorine (this behavior was determined by soil moisture transport in the investigated soils). In the absence of intensive vertical migration, more than half of 36Cl activity in arable layer of soil passes into the radish, lettuce and the aboveground parts of wheat during a single vegetation period.

Chernobyl Nuclear Accident↗
PubMed2006

Analytical strategies to investigate plant N-glycan profiles in the context of plant-made pharmaceuticals.

Plants are attractive hosts for the production of recombinant proteins. However, their inability to process authentic human N-glycan structures imposes a major limitation on their use as expression systems for therapeutic products. Several strategies have emerged to engineer plant N-glycans into human-compatible molecules. In this context, fast and reliable analytical strategies for the identification of plant N-glycan profiles have been developed to define the N-glycosylation pathways of crops, to monitor the production of plant-made pharmaceuticals and to assess in planta remodelling strategies.

Amino Acid Sequence↗
PubMed2002

Plant phenolic antioxidant and prooxidant activities: phenolics-induced oxidative damage mediated by metals in plants.

Plant phenolic compounds such as flavonoids and lignin precursors are important constituents of the human diet. These dietary phytophenolics have been recognized largely as beneficial antioxidants that can scavenge harmful active oxygen species including O(2)(.-), H(2)O(2), .OH, and (1)O(2). Here we review our current understanding of the antioxidant and prooxidant actions of phenolics in plant cells. In plant systems, phytophenolics can act as antioxidants by donating electrons to guaiacol-type peroxidases (GuPXs) for the detoxification of H(2)O(2) produced under stress conditions. As a result of such enzymatic as well as non-enzymatic antioxidant reactions, phenoxyl radicals are formed as the primary oxidized products. Until recently, phenoxyl radicals had been difficult to detect by static electron spin resonance (ESR) because they rapidly change to non-radical products. Application of Zn exerts spin-stabilizing effects on phenoxyl radicals that enables us to analyze the formation and decay kinetics of the radicals. The ESR signals of phenoxyl radicals are eliminated by monodehydroascorbate radical (MDA) reductase, suggesting that phenoxyl radicals, like the ascorbate radical, are enzymatically recycled to parent phenolics. Thus, phenolics in plant cells can form an antioxidant system equivalent to that of ascorbate. In contrast to their antioxidant activity, phytophenolics also have the potential to act as prooxidants under certain conditions. For example, flavonoids and dihydroxycinnamic acids can nick DNA via the production of radicals in the presence of Cu and O(2). Phenoxyl radicals can also initiate lipid peroxidation. Recently, Al, Zn, Ca, Mg and Cd have been found to stimulate phenoxyl radical-induced lipid peroxidation. We discuss the mechanism of phenoxyl radical prooxidant activity in terms of lifetime prolongation by spin-stabilizing agents.

Antioxidants↗
PubMed1998

Functional magnetic resonance imaging in intact plants--quantitative observation of flow in plant vessels.

Quantitative magnetic resonance (MR) images of flow velocities in intact corn plants were acquired using magnetization-prepared MR microscopy. A phase contrast flow imaging technique was used to quantitate water flow velocities and total volume flow rates in small xylem vessels. The simultaneous measurement of the transpiration of the whole plant was achieved by using a closed climate chamber within the MR magnet. The total volume flow rate and the transpiration values were in close correlation. Functional magnetic resonance imaging in intact plants was performed by light stimulation of the transpiration inside of the magnet. The change in the flow velocities in the xylem vessels of single vascular bundles was in correlation with the changes in the transpiration. Significant differences were observed between the xylem vessels in different vascular bundles. Furthermore, flow velocity measurements were performed on excised plant stems and visualized by the uptake of the MR contrast agent, gadolinium-diethylenetriamine pentaacetic acid (Gd-DTPA). A comparison between the phase contrast flow imaging and the contrast media uptake showed to be in good agreement with each other.

Hydroponics↗
PubMed2000

Long-distance transport, storage and recall of morphogenetic information in plants. The existence of a sort of primitive plant 'memory'.

An asymmetrical treatment of Bidens seedlings (pricking one of the seedling cotyledons) causes the cotyledonary buds to grow asymmetrically after release of apical dominance by decapitation of the seedlings. The symmetry-breaking signal propagates within the seedlings at a rate of at least a fraction of a millimetre per second. This information may be 'stored' (STO function) within the seedlings, without taking effect, for at least 2 weeks; then the information may be 'recalled' (RCL function), thus permitting transduction of the signal into the final response (differential growth of the buds), as a consequence of subjecting the seedlings to various symmetrical or asymmetrical treatments. A similar behaviour was observed with stimuli other than pricking (including non-traumatic stimuli), with plants other than Bidens (flax, tomato), and with responses other than cotyledonary-bud growth (hypocotyl elongation, induction of meristems, thigmomorphogenesis). There are indications that storage may involve the activation of elements implicated in cell cycle control, and that the last steps of the final response involve genes such as tch1 and hsp70. The adaptive advantage for plants in possessing STO/RCL functions is discussed. Manipulating the STO/RCL functions may have interesting practical applications, e.g. in the resistance of plants to natural stresses. The existence of the STO/RCL functions in plants constitutes an elementary form of 'memory' which may provide an experimental system simpler than the animal brain to test the validity of the theoretical models of interpretation of important features such as memory storage and evocation.

Environment↗
PubMed2001

A gamma-tubulin antibody against a plant peptide sequence localises to cell division-specific microtubule arrays and organelles in plants.

Gamma tubulin (gamma-tubulin) is involved in microtubule initiation in the eukaryotes. In animal cells it is localised to centrosomes and to other, non-centrosomal sites of microtubule initiation. In addition, cytoplasmic complexes containing gamma-tubulin (gamma-TuRCs; gamma-somes) have been described, which are multiprotein complexes involved in microtubule initiation. Most localisations of gamma-tubulin in plants have previously been achieved using an antibody directed towards a conserved peptide sequence found in animal cells, showing co-localisation with all microtubule arrays throughout the cell cycle. Because different antibodies may give various patterns of subcellular localisation, in the present study we raised a polyclonal antibody ('Hayley') to the plant peptide sequence EDFATQGGDRKDVFFY (bold letters indicate plant-specific amino acids) to further investigate the subcellular distribution in plants. Immunoblotting using wheat root tip protein extracts revealed a 58 kDagamma-tubulin-like peptide as has been described before. Immunofluorescence microscopy of wheat root-tip cells, however, revealed localisation of gamma-tubulin to a subset of mitotic microtubule arrays and the cytokinetic phragmoplast, but not to interphase cortical arrays or the preprophase band of microtubules. This lack of labelling may be caused by a restriction of antibody access during interphase, but more likely by a cell division-specific conformational change in the gamma-tubulin molecule. Our antibody also gave an organelle-like labelling, not described before, which may represent storage forms or precursors of gamma-tubulin, perhaps related to plastid-based microtubule initiation in hepatics and hornworts.

Amino Acid Sequence↗
PubMed1990

Structurally unique plant cytochrome c oxidase isolated from wheat germ, a rich source of plant mitochondrial enzymes.

Purification and characterization of plant cytochrome c oxidases have been impeded by the difficulty of obtaining enough plant mitochondria. We have found commercial wheat germ to be a rich and convenient source of mitochondrial membranes containing respiratory chain complexes in ratios and amounts similar to mitochondria prepared from etiolated seedlings. Cytochrome c oxidase was purified from these membranes by anion-exchange (MonoQ) fast protein liquid chromatography. The enzyme is highly active (turnover number up to 1000 s-1) and exhibits biphasic cytochrome c reaction kinetics similar to those of beef heart oxidase. As with other plant oxidases, the visible spectrum of wheat germ oxidase in the reduced form is blue-shifted compared to other eukaryotic cytochrome oxidases, with peaks at 441 and 602 nm. The electron paramagnetic resonance spectrum of CuA of the wheat germ enzyme is very similar to that of the maize and beef heart enzymes, suggesting that the copper environment is not altered. Sodium dodecyl sulfate-polyacrylamide gels show a subunit composition in which subunits I-IV resemble those of the yeast enzyme in size and antigenicity, while three to four smaller peptides are dissimilar to yeast and other eukaryotic oxidases. A difference between the subunit composition of the wheat germ and wheat seedling enzymes suggests the existence of a developmental or tissue-specific form of cytochrome oxidase in plants.

Animals↗
PubMed2002

Air-side and plant-side resistances influence the uptake of airborne PCBs by evergreen plants.

The transfer of persistent organic pollutants (POPs) from airto vegetation is an important air-surface exchange process that affects global cycling and can result in human and wildlife exposure via the terrestrial food chain. To improve understanding of this process, the uptake of gas-phase polychlorinated biphenyls (PCBs) by two slow-growing evergreen shrubs, Skimmia japonicaThunb. and Hebe"Great Orme", was studied to investigate the influence of air-side and plant-side resistances. Uptake of PCBs was monitored over periods of hours, days, and weeks. Uptake rates were higher in the smaller Hebe leaves than the Skimmia leaves. Equilibrium was not attained between air and plants in the duration of the experiments; uptake curves were indicative of a two-phase uptake-step 1 over the order of hours and step 2 continuing steadily over days to weeks. Uptake rates (h(-1)) were greater in conditions simulating typical ambient wind speeds (2 m s(-1)) than under still air, indicating a significant impact of air-side resistance relative to plant-side resistance in still air. Wind speed is an important variable that has not been previously considered in studies of the air-planttransfer of persistent organic pollutants (POPs). Uptake rate constants increased with increasing level of chlorination (and hence K(OA)) both in still air and under turbulent conditions. This was inconsistent with the idea of air-side resistance dominating uptake, since diffusion rates in air decrease with molecular weight (and hence KOA). Greater uptake of particle-bound PCBs may have contributed to this finding, but the most likely explanation is the previously established relationship that the permeability of cuticles increases with increasing KOA of the diffusing chemical. The findings indicate that plant-side resistance can have an important effect on uptake rates of different PCB congeners in the field, even when air-side resistance is high.

Air↗
PubMed2004

A history of the Federation of European Societies of Plant Physiology FESPP since its foundation in 1978--including notes on events preceding the foundation and following re-naming as the Federation of European Societies of Plant Biology (FESPB) in 2002.

After several years of close contacts and extensive discussion between various plant physiologists of different European countries, the Federation of European Societies of Plant Physiology (FESPP) was established in 1978 in Edinburgh. The aim of the FESPP was and remains to promote up-to-date plant physiology research in all European countries and to stimulate scientific cooperation and the exchange of scientists between the different member societies by organizing congresses and workshops as well as editing four (recently five) Federation-affiliated journals. The short History of FESPP presented here covers the preparatory years of the 1970s that led to its actual foundation in 1978, and then its further development up to and following the Federation's reconstitution in 2002 as the Federation of European Societies of Plant Biology (FESPB).

Biology↗
PubMed2003

Plants and plant extracts for improving animal productivity.

Plant secondary metabolites are a natural resource that is largely unexploited in 'conventional' animal production systems. They have in the past been generally considered as a source of antinutritional factors, and not as a source of exploitable performance-enhancing compounds. Recent and continuing changes to legislation controlling the use of animal feed additives have stimulated interest in bioactive secondary metabolites as alternative performance enhancers. They are broadly compatible with current thinking on the future of agriculture and food in Europe, and with consumer opinion. Interest has been largely on their manipulative role in the digestive and absorptive processes of the hindgut. The present paper will review the use of plants and their extracts to manipulate the rumen microbial ecosystem to improve the efficiency of rumen metabolism. The bioavailability of secondary metabolites and their actions on peripheral metabolism will be considered with a view to improving animal performance. The challenge of delivering plants and their extracts to animals outdoors in a controlled manner will be discussed. Much of what is known about the beneficial roles of plant secondary metabolites on animal performance is circumstantial and is based on tenuous data. In order to more fully exploit their bioactive properties for the benefit of animal performance, modes of action need to be understood. Uptake will be dependent on proven efficacy and consumer acceptance of assurances relating to safety, welfare and the environment.

Animal Feed↗
PubMed2004

Developing a virtual reality application for training nuclear power plant operators: setting up a database containing dose rates in the refuelling plant.

Operators in Nuclear Power Plants can receive high doses during refuelling operations. A training programme for simulating refuelling operations will be useful in reducing the doses received by workers as well as minimising operation time. With this goal in mind, a virtual reality application is developed within the framework of the CIPRES project. The application requires doses, both instantaneous and accumulated, to be displayed at all times during operator training. Therefore, it is necessary to set up a database containing dose rates at every point in the refuelling plant. This database is based on radiological protection surveillance data measured in the plant during refuelling operations. Some interpolation routines have been used to estimate doses through the refuelling plant. Different assumptions have been adopted in order to perform the interpolation and obtain consistent data. In this paper, the procedures developed to set up the dose database for the virtual reality application are presented and analysed.

Computer Simulation↗
PubMed1991

The basic domain of plant B-ZIP proteins facilitates import of a reporter protein into plant nuclei.

The import of large molecules into the nucleus is an active process that requires the presence in cis of a nuclear localization signal (NLS). Although these signals have been well characterized in mammalian, yeast, and amphibian nuclear proteins, no plant NLS has yet been described. The NLSs identified so far generally contain clusters of basic amino acids. This characteristic feature prompted us to test several basic domains from the plant DNA-binding proteins TGA-1A and TGA-1B and the TATA box-binding protein TFIID for nuclear targeting function. When tested as N-terminal fusions to the beta-glucuronidase protein, only those constructs containing the DNA binding (basic) domain of the basic-zipper (B-ZIP) region of TGA-1A or TGA-1B conferred nuclear import. These results suggest a close association or overlap of the DNA binding and nuclear targeting domains of B-ZIP proteins. We also demonstrated that a wild-type but not a mutant simian virus 40 large T-antigen NLS facilitates import into plant nuclei, indicating a strong conservation between nuclear import mechanisms in animals and plants.

Amino Acid Sequence↗
PubMed2000

Effect of field inoculation with Sinorhizobium meliloti L33 on the composition of bacterial communities in rhizospheres of a target plant (Medicago sativa) and a non-target plant (Chenopodium album)-linking of 16S rRNA gene-based single-strand conformation polymorphism community profiles to the diversity of cultivated bacteria.

Fourteen weeks after field release of luciferase gene-tagged Sinorhizobium meliloti L33 in field plots seeded with Medicago sativa, we found that the inoculant also occurred in bulk soil from noninoculated control plots. In rhizospheres of M. sativa plants, S. meliloti L33 could be detected in noninoculated plots 12 weeks after inoculation, indicating that growth in the rhizosphere preceded spread into bulk soil. To determine whether inoculation affected bacterial diversity, 1,119 bacteria were isolated from the rhizospheres of M. sativa and Chenopodium album, which was the dominant weed in the field plots. Amplified ribosomal DNA restriction analysis (ARDRA) revealed plant-specific fragment size frequencies. Dominant ARDRA groups were identified by 16S rRNA gene nucleotide sequencing. Database comparisons indicated that the rhizospheres contained members of the Proteobacteria (alpha, beta, and gamma subgroups), members of the Cytophaga-Flavobacterium group, and gram-positive bacteria with high G+C DNA contents. The levels of many groups were affected by the plant species and, in the case of M. sativa, by inoculation. The most abundant isolates were related to Variovorax sp., Arthrobacter ramosus, and Acinetobacter calcoaceticus. In the rhizosphere of M. sativa, inoculation reduced the numbers of cells of A. calcoaceticus and members of the genus Pseudomonas and increased the number of rhizobia. Cultivation-independent PCR-single-strand conformation polymorphism (SSCP) profiles of a 16S rRNA gene region confirmed the existence of plant-specific rhizosphere communities and the effect of the inoculant. All dominant ARDRA groups except Variovorax species could be detected. On the other hand, the SSCP profiles revealed products which could not be assigned to the dominant cultured isolates, indicating that the bacterial diversity was greater than the diversity suggested by cultivation.

Agriculture↗
PubMed2006

Medicinal plants from Peru: a review of plants as potential agents against cancer.

Natural products have played a significant role in drug discovery and development especially for agents against cancer and infectious disease. An analysis of new and approved drugs for cancer by the United States Food and Drug Administration over the period of 1981-2002 showed that 62% of these cancer drugs were of natural origin. Natural compounds possess highly diverse and complex molecular structures compared to small molecule synthetic drugs and often provide highly specific biological activities likely derived from the rigidity and high number of chiral centers. Ethnotraditional use of plant-derived natural products has been a major source for discovery of potential medicinal agents. A number of native Andean and Amazonian medicines of plant origin are used as traditional medicine in Peru to treat different diseases. Of particular interest in this mini-review are three plant materials endemic to Peru with the common names of Cat's claw (Uncaria tomentosa), Maca (Lepidium meyenii), and Dragon's blood (Croton lechleri) each having been scientifically investigated for a wide range of therapeutic uses including as specific anti-cancer agents as originally discovered from the long history of traditional usage and anecdotal information by local population groups in South America. Against this background, we present an evidence-based analysis of the chemistry, biological properties, and anti-tumor activities for these three plant materials. In addition, this review will discuss areas requiring future study and the inherent limitations in their experimental use as anti-cancer agents.

Animals↗
PubMed2003

Potential of a plant-parasitic nematode to facilitate internal contamination of tomato plants by Salmonella.

The objective of this study was to determine whether tomato plants infested with a plant-parasitic nematode, Meloidogne incognita, can internalize Salmonella. Tomato plants (Lycopersicon esculentum Mill. 'Rutgers') were grown in soil infested with M. incognita and/or inoculated with a six-serotype mixture of Salmonella enterica. M. incognita, upon wounding roots when parasitizing the tomato plant, does not result in the entry and survival of Salmonella. Analysis of roots, galls, stems, and leaves 2 and 4 weeks after inoculation of the soil failed to reveal the presence of Salmonella. Salmonella remained viable in soil for at least 4 weeks. The potential for the presence of Salmonella in the tissues of tomato fruits via root entrance facilitated by M. incognita appears to be remote.

Animals↗
PubMed2000

Analysis of Arabidopsis glucose insensitive mutants, gin5 and gin6, reveals a central role of the plant hormone ABA in the regulation of plant vegetative development by sugar.

Sugars have signaling roles in a wide variety of developmental processes in plants. To elucidate the regulatory components that constitute the glucose signaling network governing plant growth and development, we have isolated and characterized two Arabidopsis glucose insensitive mutants, gin5 and gin6, based on a glucose-induced developmental arrest during early seedling morphogenesis. The T-DNA-tagged gin6 mutant abrogates the glucose-induced expression of a putative transcription factor, ABI4, previously shown to be involved in seed-specific abscisic acid (ABA) responses. Thus, ABI4 might be a regulator involved in both glucose- and seed-specific ABA signaling. The characterization of the gin5 mutant, on the other hand, reveals that glucose-specific accumulation of ABA is essential for hexokinase-mediated glucose responses. Consistent with this result, we show that three ABA-deficient mutants (aba1-1, aba2-1, and aba3-2) are also glucose insensitive. Exogenous ABA can restore normal glucose responses in gin5 and aba mutants but not in gin6 plants. Surprisingly, only abi4 and abi5-1 but not other ABA-insensitive signaling mutants (abi1-1, abi2-1, and abi3-1) exhibit glucose insensitivity, indicating the involvement of a distinct ABA signaling pathway in glucose responses. These results provide the first direct evidence to support a novel and central role of ABA in plant glucose responses mediated through glucose regulation of both ABA levels by GIN5 and ABA signaling by GIN6/ABI4.

Abscisic Acid↗