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PubMed2006

99mTc(CO)3-VIP analogues: preparation and evaluation as tumor imaging agent.

Vasoactive intestinal peptide (VIP) receptors are expressed abundantly on many types of tumors and, hence, radiolabeled VIP analogues are being explored for tumor imaging and therapy. Here, we report synthesis of three VIP analogues and their radiolabeling with (99m)Tc via a novel tricarbonyl synthon. The radiolabeled product could be prepared in high yields (>95%) and stability. In vitro studies showed significant uptake of (99m)Tc(CO)((3))-VP05 in human colon carcinoma cells. Biodistribution studies in animal tumor model showed 0.4-1%ID/g tumor uptake.

Amino Acid Sequence↗
PubMed2004

Disruption of hydrophobic stability of biomembranes is the earliest event in several clinical disorders.

Hydrophobic attractive force is the major force in maintaining the stability of biomembranes, yielding coordinated functionality to the embedded proteins that they contain. This force between the composite linear hydrocarbons of the biomembranes is a function of their length and their mutual parallel distance from each other, and is extremely sensitive to this distance. Extracellular, natural linear hydrocarbons of certain length and shape can intercalate into lipid matrix of the biomembranes, reducing their innate hydrophobic net strength in a concentration-dependent manner, making them loose, leaky, and thus gaining the credence of stimulus-generating agents. In physiological circulatory concentration, these molecules may have a role for the maintenance of cellular homeostasis. However, in stagnating physiological excess, these same agents can become acutely or chronically stimulating and, therefore, disease-precipitating. Such situations do exist in the clinical disorders of acne, atherosclerosis, acute pancreatitis, diabetes, diabetic retinopathy, homocysteinemea, and stress. A systematic approach, beginning with surface film studies with the suspect linear hydrocarbons, can be followed up with in vitro and in vivo studies. This should substantiate or negate the view presented here. Isolated information, along these lines, already exist in literature. The example of acne is a suitable starting point to elaborate this view, for sebaceous gland of the human pilosebaceous unit (PSU) contains all the exemplary, stimulus-inducing linear hydrocarbons to generate surface-reaction on the pilosebaceous ductal surface.

Acne Vulgaris↗
PubMed2005

Multidrug transporter MexB of Pseudomonas aeruginosa: overexpression, purification, and initial structural characterization.

Structural and functional characterization of the multidrug transporter, MexB, of Pseudomonas aeruginosa is significantly restricted due to a low yield of approximately 0.1 mg/L of culture from natural sources. To facilitate structural studies of this medically important transporter protein, we developed a large-scale system for expression of the genetically engineered recombinant, MexB, in the Escherichia coli cell. Using the system, the eventual yield of MexB attained was about 10mg/L of culture. The optimized purification protocol in the presence of dodecyl beta-D-maltoside allowed isolation of highly homogeneous MexB. The oligomeric state of the protein in detergent solution has been characterized to verify that the native state of the purified protein has been preserved. The molecular mass of the protein-detergent complex was found to be 380-450kDa. The MexB-dodecyl beta-d-maltoside mass ratio was determined to be 1.8 +/- 0.05. Taking into account the monomeric MexB molecular mass deduced from its amino acid sequence (112.8 kDa), we concluded that the purified MexB exists as the homotrimer in the surfactant solution. Circular dichroism analysis of MexB showed dominance of the alpha-helix structures. High yield, homogeneity, and stability of MexB position it as a good candidate for structural and functional characterization.

Bacterial Outer Membrane Proteins↗
PubMed1988

Cephalosporin antibiotics: molecules that respond to different needs.

Since the introduction of cephalothin in 1964, there has been a large number of cephalosporins synthesized and used clinically. Modification of the beta-acyl side chain has yielded compounds with stability against attack by plasmid and chromosomal beta-lactamases. The presence of methoxy groups at C-7 of the bicyclic cephalosporin nucleus has provided excellent activity against many anaerobic species. Changes in structure have also provided agents with extended half-lives, permitting twice a day dosing or single-dose prophylaxis. Cephalosporins clearly have come of age as agents to meet many different infectious needs.

Cephalosporins↗
PubMed1999

Evaluation of peroral silicone dosage forms in humans by gamma-scintigraphy.

Gastric emptying of oral silicone dosage forms was studied in humans by gamma-scintigraphy. To achieve a constant and predictable residence time in the stomach, three different formulations based on known concepts such as controlled swelling were investigated. The importance of physical parameters such as size or shape were also examined to assess the feasibility of designing a dosage form for gastric retention. Three shapes: minimatrices, extruded rods and moulded slabs were screened. To label the silicone polymer, two isotopes, used routinely in nuclear medicine departments, were selected: iodine-123 and indium-111. To select the most suitable isotope, the yield and the stability of the labelling were determined in vitro on the pharmaceutical dosage forms. The residence time of these silicone formulations, labelled with iodine and administered in hard gelatine capsules, was monitored in 12 subjects with a gamma camera. The study was performed under fed conditions after ingestion of a standardised meal labelled with indium. The minimatrices provided at least 3 h retention, slabs exhibited 4 h 40 min retention. For the rods the mean residence time in the stomach was around 4 h 20 min. In addition, a correlation was established between the gastric emptying of rods and the half-gastric residence time of meal. On the contrary, such a correlation was not observed for the slabs.

Administration, Oral↗
PubMedDate not supplied

Influencing factors on ESR bone dosimetry.

This paper reports on the influence that temperature during irradiation and dose-rate have on the radiation-induced free-radical yield and time stability in non de-proteinized bone. Bone from chicken legs was irradiated in the 253-293 K temperature range and with two different sources (60Co, 0.6 Gy/s and 12 MeV electrons, 6 x 10(6) Gy/s). Temperature influences type and number of radicals, while radical concentration seems to slightly decrease with dose rate.

Animals↗
PubMed2005

Detection of central nervous system leukemia in children with acute lymphoblastic leukemia by real-time polymerase chain reaction.

Accurate detection of central nervous system (CNS) involvement in children with newly diagnosed acute lymphoblastic leukemia (ALL) could have profound prognostic and therapeutic implications. We examined various cerebrospinal fluid (CSF) preservation methods to yield adequate DNA stability for polymerase chain reaction (PCR) analysis and developed a quantitative real-time PCR assay to detect occult CNS leukemia. Sixty CSF specimens were maintained in several storage conditions for varying amounts of time, and we found that preserving CSF in 1:1 serum-free RPMI tissue culture medium offers the best stability of DNA for PCR analysis. Sixty CSF samples (30 at diagnosis and 30 at the end of induction therapy) from 30 children with ALL were tested for CNS leukemic involvement by real-time PCR using patient-specific antigen receptor gene rearrangement primers. Six of thirty patient diagnosis samples were PCR-positive at levels ranging from 0.5 to 66% leukemic blasts in the CSF. Four of these patients had no clinical or cytomorphological evidence of CNS leukemia involvement at that time. All 30 CSF samples drawn at the end of induction therapy were PCR-negative. The data indicate that real-time PCR analysis of CSF is an excellent tool to assess occult CNS leukemia involvement in patients with ALL and can possibly be used to refine CNS status classification.

Central Nervous System Neoplasms↗
PubMedDate not supplied

Synthesis and evaluation of two new bifunctional carboxymethylated tetraazamacrocyclic chelating agents for protein labeling with indium-111.

The synthesis of two new N- and C-functionalized tetraazamacrocyclic ligands intended to be covalently linked to biomolecules like monoclonal antibodies and to bind the gamma-emitting isotope indium-111 in a thermodynamically and/or kinetically inert way is described. 12-(p-Nitrobenzyl)-1,4,7,10-tetraazacyclotridecane-1,4,7,10-tetraa cetic acid (L1) was synthesized by means of bimolecular cyclization with the appropriate malonic acid diethyl ester and triethylenetetraamine, followed by reduction with diborane and alkylation of the cyclic tetraamine with bromoacetic acid. The corresponding triscarboxymethylated ligand L2 was made by statistical alkylation of the tetraamine. Both ligands fulfill the criteria for antibody labeling using the bifunctional chelate approach, namely fast chelate formation, high radiochemical yield, and high stability under physiological conditions. Surprisingly the heptadentate ligand L2 confers higher stability to In3+ and exhibits faster complex formation than octadentate L1. 13C NMR spectra in solution indicate that the difference in stability is not due to incomplete coordination of all four carboxylate groups in In-L1.

Acetates↗
PubMed2002

Structure-based kinetic modeling of excited-state transfer and trapping in histidine-tagged photosystem II core complexes from synechocystis.

Chlorophyll fluorescence decay kinetics in photosynthesis are dependent on processes of excitation energy transfer, charge separation, and electron transfer in photosystem II (PSII). The interpretation of fluorescence decay kinetics and their accurate simulation by an appropriate kinetic model is highly dependent upon assumptions made concerning the homogeneity and activity of PSII preparations. While relatively simple kinetic models assuming sample heterogeneity have been used to model fluorescence decay in oxygen-evolving PSII core complexes, more complex models have been applied to the electron transport impaired but more highly purified D1-D2-cyt b(559) preparations. To gain more insight into the excited-state dynamics of PSII and to characterize the origins of multicomponent fluorescence decay, we modeled the emission kinetics of purified highly active His-tagged PSII core complexes with structure-based kinetic models. The fluorescence decay kinetics of PSII complexes contained a minimum of three exponential decay components at F(0) and four components at F(m). These kinetics were not described well with the single radical pair energy level model, and the introduction of either static disorder or a dynamic relaxation of the radical pair energy level was required to simulate the fluorescence decay adequately. An unreasonably low yield of charge stabilization and wide distribution of energy levels was required for the static disorder model, and we found the assumption of dynamic relaxation of the primary radical pair to be more suitable. Comparison modeling of the fluorescence decay kinetics from PSII core complexes and D1-D2-cyt b(559) reaction centers indicated that the rates of charge separation and relaxation of the radical pair are likely altered in isolated reaction centers.

Cyanobacteria↗
PubMed2002

Energetics of radical transfer in DNA photolyase.

Charge separation and radical transfer in DNA photolyase from Escherichia coli is investigated by computing electrostatic free energies from a solution of the Poisson-Boltzmann equation. For the initial charge separation 450 meV are available. According to recent experiments [Aubert et al. Nature 2000, 405, 586-590] the flavin receives an electron from the proximal tryptophan W382, which consequently forms a cationic radical WH(*)(+)382. The radical state is subsequently transferred along the triad W382-W359-W306 of conserved tryptophans. The radical transfer to the intermediate tryptophan W359 is nearly isoenergetic (58 meV uphill); the radical transfer from the intermediate W359 to the distal W306 is 200 meV downhill in energy, funneling and stabilizing the radical state at W306. The resulting cationic radical WH(*)(+)306 is further stabilized by deprotonation, yielding the neutral radical W(*)306, which is 214 meV below WH(*)(+)306. The time scale of the charge recombination process yielding back the resting enzyme with FADH(*) is governed by reprotonation of W306, with a calculated lifetime of 1.2 ms that correlates well with the measured lifetime of 17 ms. In photolyase from Anacystis nidulans the radical state is partially transferred to a tyrosine [Aubert et al. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 5423-5427]. In photolyase from Escherichia coli, there is a tyrosine (Y464) close to the distal tryptophan W306 that could play this role. We show that this tyrosine cannot be involved in radical transfer, because the electron transfer from tyrosine to W306 is much too endergonic (750 meV) and a direct hydrogen transfer is likely too slow. Coupling of specific charge states of the tryptophan triad with protonation patterns of titratable residues of photolyase is small.

Deoxyribodipyrimidine Photo-Lyase↗
PubMed2002

A quantum chemistry study of binding carotenoids in the bacterial light-harvesting complexes.

Carotenoids play the dual function of light harvesting and photoprotection in photosynthetic organisms. Despite their functional importance, the molecular basis for binding of carotenoids in the photosynthetic proteins is poorly understood. We have discovered that all carotenoids are surrounded either by aromatic residues or by chlorophylls in all known crystal structures of the photosynthetic pigment-protein complexes. The intermolecular pi-pi stacking interactions between carotenoids and the surrounding aromatic residues in the light-harvesting complex II (LH-II) of Rhodospirillum molischianum were analyzed by high level ab initio electronic structure calculations. Intermolecular interaction energies were calculated with the second-order Møller-Plesset perturbation method (MP2) using the modified 6-31G*(0.25) basis set with diffuse d-polarization by Hobza and co-workers. The MP2/6-31G*(0.25) calculations yield a total stabilization energy of -15.66 kcal/mol between the carotenoid molecule and the four surrounding aromatic residues (alpha-Trp-23, beta-Phe-20, beta-Phe-24, beta-Phe-27). It is thus concluded that pi-pi stacking interactions between carotenoids and the aromatic residues play an essential role in binding carotenoids in the LH-II complex of Rhodospirillum molischianum. The physical nature of the pi-pi stacking interactions was further analyzed, and the dispersion interactions were found to be the dominant intermolecular attraction force. There is also a substantial electrostatic contribution to the overall intermolecular stabilization energy.

Carotenoids↗
PubMed2002

Palladium(0)-catalyzed enantioselective O,S-rearrangement of racemic O-allylic thiocarbamates: a new entry to enantioenriched allylic sulfur compounds.

Reaction of (+/-)-(E)-pent-3-en-2-ol, (+/-)-(E)-hept-4-en-3-ol, (+/-)-(E)-2,6-dimethylhept-4-en-3-ol, (+/-)-cyclohex-2-en-1-ol, and (+/-)-cyclohept-2-en-1-ol with methyl, ethyl, n-propyl, isopropyl, n-butyl, tert-butyl, and benzyl isothiocyanate gave the corresponding racemic O-allylic thiocarbamates of medium to good thermal stability in good yields. The palladium(0)-catalyzed rearrangement of the (+/-)-(E)-pent-3-en-2-ol-, (+/-)-(E)-hept-4-en-3-ol-, (+/-)-cyclohex-2-en-1-ol-, and (+/-)-cyclohept-2-en-1-ol-derived O-allylic thiocarbamates at room temperature in methylene chloride by using Pd2(dba)3*CHCl3 (dba = dibenzylideneacetone) as precatalyst and (+)-(1R,2R)-1,2-bis-N-((2-(diphenylphosphino)benzoyl)-1,2-diaminocyclohexane as ligand for the palladium atom proceeded quantitatively and gave the corresponding acyclic (R)-configured S-allylic thiocarbamates and the cyclic (S)-configured S-allylic thiocarbamates with ee values ranging from 85% to > or = 99% in yields of 76-94%. Rearrangement of the O-allylic thiocarbamates carrying a methyl group at the N atom not only was the fastest but also proceeded with the highest enantioselectivity. No rearrangement was observed under these conditions in the case of the racemic N-methyl O-allylic thiocarbamate derived from (+/-)-2,6-dimethylhept-4-en-3-ol, which has a branched carbon skeleton. (S)-cyclohex-2-enethiol of 97% ee was obtained through hydrolysis of the corresponding N-methyl S-allylic thiocarbamate. 2-((R)-(E)-1-methylbut-2-enylsulfanyl)pyrimidine of 91% ee and 2-((S)-cyclohex-2-enylsulfanyl)pyrimidine of 97% ee were synthesized in one synthetic operation from the corresponding N-methyl S-allylic thiocarbamates and 2-chloropyrimidine. Similarly, (S)-cyclohex-2-enylsulfanyl)benzene of 97% ee was obtained in one synthetic operation from the corresponding N-methyl S-allylic thiocarbamate through a palladium(0)-catalyzed substitution of iodobenzene in the presence of a base. The palladium(0)-catalyzed enantioselective rearrangement of O-allylic carbamates to S-allylic carbamates has been extended from the solution phase to the solid phase by using a methyl thioisocyanate polystyrene resin. In the case investigated the enantioselectivity of the rearrangement on the solid phase was considerably lower than that in solution.

Journal Article↗
PubMed2003

2-silyloxy-1,2-oxazines, a new type of acetals of conjugated nitroso alkenes.

3-alkyl-substituted 1,2-oxazine N-oxides 2 can be selectively transformed into 2-silyloxy-1,2-oxazines 1 upon treatment with silylating reagents. In the solid state derivatives 1 adopt a chair conformation with the pyramidal nitrogen atom, whereas in solution they exist as an equilibrating mixture of two conformers (DeltaG++ 55-60 kJ/mol). A preliminary study of the reactivity of nitrosals 1 has shown that they react with O- and N-stabilized carbocations to yield 1,2-oxazine N-oxides with a functionalized alkyl substituent at the 3-position. Moreover, compounds 1 can rearrange into silyloxy-1,2-oxazines 5 and react with morpholine to produce 3-morpholinoalkyl-1,2-oxazines 7 existing in a tautameric equilibrium with open-chain oximes 6.

Journal Article↗
PubMed2005

Synthesis and real-time magnetic manipulation of a biaxial superparamagnetic colloid.

Superparamagnetic colloidal plates were synthesized from tetrabutylammonium stabilized Ca(2)Nb(3)O(10) nanosheets and oleic acid-stabilized Fe(3)O(4) nanoparticles. Modification with 3-aminopropyltrimethoxysilane produces amine-terminated Ca(2)Nb(3)O(10) with an amine concentration of 0.43 +/- 0.06 groups per Ca(2)Nb(3)O(10) unit as follows from spectroscopic quantification with trinitrobenzenesulfonic acid as a dye. Treatment of the modified sheets in THF/ethanol with 5.3 nm oleic acid-stabilized magnetite nanoparticles yields pseudo-2D assemblies that consist of 2 nm thick nanosheets decorated on both sides with a dense collection (9.3 +/- 0.5 x 10(3) particles per square micrometer per side) of magnetite particles. In noncoordinating or weakly coordinating solvents, these composite particles further aggregate into stacked aggregates with a mean edge length of 1.6 +/- 0.7 microm and a thickness of 79 +/- 30 nm. The colloidal plates were characterized by elemental analysis, X-ray powder diffraction, and infrared and UV/vis spectroscopy. SQUID measurements show that films of the aligned particles are superparamagnetic at room temperature. The magnetic hysteresis that is observed at 5 K reveals that the plates have a magnetic anisotropy with the easy axis in the plane of the plates and the hard axis perpendicular to it. Calculations show that the magnetic anisotropy is a direct consequence of the two-dimensional distribution of the magnetic nanoparticles on the sheets. Optical microscopy reveals that when suspended in ethanol or THF, the colloidal plates can be rotated in real time with a variable external magnetic field (200 Oe). Magnetic alignment of the particles in suspensions also produces asymmetric light scattering patterns and magnetic birefringence. These effects and the observed magneto-orientational properties make the biaxial colloids interesting as components in displays and as magnetic actuators.

Journal Article↗
PubMed2006

Modification of mesoporous TiO2 electrodes with cross-linkable B12 derivatives.

The modification of mesoporous TiO2 film electrodes with vitamin B12 derivatives (e.g., 1, 2, or 3) yields electrodes with interesting sensing and electrocatalytic properties. So far, only coordinative bonding between the B12 derivatives and the metal oxide surface was used, and B12 was lost under conditions of extended electrocatalysis [1. Schulthess, P.; Ammann, D.; Simon, W.; Caderas, C.; Stepanek, R.; Krautler, B. Helv. Chim. Acta 1984, 67 (4), 1026-1032. 2. Mayor, M.; Scheffold, R.; Walder, L. Helv. Chim. Acta 1997, 80 (4), 1183-1189. 3. Stepanek, R. Ph.D.; ETH: Zürich, 1987]. (1-3) We report here on a procedure that yields highly improved stabilities of the electrocatalysts toward reductive expulsion from the mesopores. It is based on cross-linking the B12 derivatives (4 or 5) equipped with multiple reaction sites in the TiO2 mesopores. The cross-linkers are multiple functionalized, one of them assisting the electron transfer from TiO2 to the Co centers via redox shuttling. The modified electrodes show high electrocatalytic reactivity toward organic halides and highly improved stability.

Catalysis↗
PubMed2006

Electrochemical surface characterization and O2 reduction kinetics of Se surface-modified ru nanoparticle-based RuSe(y)/C catalysts.

The electrochemical properties of Se surface-modified Ru/C catalysts (RuSey/C with y = 0 to 1) and their O2 reduction characteristics were determined in model studies under well-defined mass transport conditions, combining quantitative differential electrochemical mass spectrometry and double-disk electrode thin-layer flow-cell measurements. Surface characterization of the catalysts including the quantitative evaluation of the active surface area was performed by electrochemical/mass spectrometric (combined H-upd adsorption, preadsorbed CO monolayer oxidation, Cu-upd adsorption/stripping, and RuOx formation) methods. The suitability of these methods for the determination of the active surface area in the high and low Se coverage regime are discussed, and COad stripping is found to be the most relevant method for the present catalysts. The kinetic parameters for the ORR (activity and selectivity) under quasi-steady-state conditions and their variation with Se modification were evaluated in potentiostatic flow-cell measurements. Modification of Ru/C catalyst by Se improves the O2 reduction activity and reduces the tendency for H2O2 formation in the technically relevant potential region of 0.6-0.8 VRHE, but even for the best catalyst compositions a significant ( approximately 0.2 VRHE) overpotential for O2 reduction on the RuSey/C catalysts remains compared to that for the Pt/C catalyst, and we find H2O2 yields of at least 1% at typical cathode operation potentials. Consequences of the relatively high H2O2 yields for membrane/electrode stability in practical applications are discussed.

Carbon↗
PubMed2006

Aerobic intramolecular oxidative amination of alkenes catalyzed by NHC-coordinated palladium complexes.

[reaction: see text] Palladium(II) complexes bearing a single N-heterocyclic carbene ligand serve as effective catalysts for the aerobic oxidative cyclization of alkenes with pendant sulfonamides. The use of carboxylic acid cocatalysts (AcOH and PhCO(2)H) often leads to significant improvements in catalyst stability and product yield and enables catalytic turnover to be achieved with air, rather than pure oxygen gas, as the source of O(2).

Alkenes↗
PubMed1999

Accelerated coffee pulp composting.

The effect of two abundant, easily available and very low-cost agro-industrial organic residues, i.e., filter cake from the sugar industry and poultry litter, on the composting stabilization time of coffee pulp and on the quality of the produced compost, was evaluated. Piles of one cubic meter were built and monitored within the facilities of a coffee processing plant in the Coatepec region of the State of Veracruz, Mexico. Manual aeration was carried out once a week. A longer thermophilic period (28 days) and a much lower C/N ratio (in the range of 6.9-9.1) were observed in the piles containing the amendments, as compared to the control pile containing only coffee pulp (14 days and a C/N ratio of 14.4, respectively). The maximum assimilation rate of the reducing sugars was 1.6 g kg-1 d-1 (from 7.5 to 5.3%) during the first two weeks when accelerators were present in the proportion of 20% filter cake plus 20% poultry litter, while they accumulated at a rate of 1.2 g kg-1 d-1 (from 7.4 to 9.13%) during the same period in the control pile. The best combination of amendments was 30% filter cake with 20% poultry litter, resulting in a final nitrogen content as high as 4.81%. The second best combination was 20% filter cake with 10% poultry litter, resulting in a compost which also contained a high level of total nitrogen (4.54%). It was concluded that the use of these two residues enhanced the composting process of coffee pulp, promoting a shorter stabilization period and yielding a higher quality of compost.

Biodegradation, Environmental↗