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PubMed2000

Detection and identification of gastrointestinal Lactobacillus species by using denaturing gradient gel electrophoresis and species-specific PCR primers.

Denaturing gradient gel electrophoresis (DGGE) of DNA fragments obtained by PCR amplification of the V2-V3 region of the 16S rRNA gene was used to detect the presence of Lactobacillus species in the stomach contents of mice. Lactobacillus isolates cultured from human and porcine gastrointestinal samples were identified to the species level by using a combination of DGGE and species-specific PCR primers that targeted 16S-23S rRNA intergenic spacer region or 16S rRNA gene sequences. The identifications obtained by this approach were confirmed by sequencing the V2-V3 region of the 16S rRNA gene and by a BLAST search of the GenBank database.

Animals↗

PubMed2005

Molecular characterization of Theileria species associated with mortality in four species of African antelopes.

Pathogen DNA was isolated from roan antelope (Hippotragus equinus), sable antelope (Hippotragus niger), greater kudu (Tragelaphus strepsiceros), and common gray duiker (Sylvicapra grimmia) in South Africa whose deaths were attributed to either theileriosis or cytauxzoonosis. We developed Theileria species-specific probes used in combination with reverse line blot hybridization assays and identified three different species of Theileria in four African antelope species. The close phylogenetic relationship between members of the genera Theileria and Cytauxzoon, similarities in the morphologies of developmental stages, and confusion in the literature regarding theileriosis or cytauxzoonosis are discussed.

Animals↗

PubMed2002

Associations between Trichinella species and host species in Finland.

Examination of 627 wild animals--raccoon dogs (Nyctereutes procyonoides), red foxes (Vulpes vulpes), European lynxes (Lynx lynx), brown bears (Ursus arctos), wolves (Canis lupus), and badgers (Meles meles)--revealed Trichinella spp. The prevalence varied according to geographical region of Finland (north; southwest, SW; and southeast, SE) and was the highest among lynxes (70%, SW). The risk of trichinellosis was higher in the SE (odds ratio, OR, 19.4) and SW regions (OR 14.3), as compared with the northern region (OR 1), with no difference between the former 2 regions. Foxes (OR 2.1) and lynxes (OR 1.9) had a higher risk than raccoon dogs (OR 1) of being infected. The distribution of different Trichinella species was evaluated in 87 wild and domestic mammals by multiplex polymerase chain reaction. Trichinella spiralis was detected more often in domestic and synanthropic animals than in sylvatic hosts. Trichinella nativa was detected only in wildlife. Trichinella pseudospiralis was found both in sylvatic and synanthropic hosts. Trichinella britovi was detected only in mixed infections with other Trichinella species. The raccoon dog was the sole host for all 4 Trichinella species and also carried the most intense infections.

Animals↗

PubMed2004

Two new species of Spiochaetopterus (Annelida: Polychaeta) from Sagami Bay and Tokyo Bay, Central Japan with a comparative table of species from Japanese and adjacent waters.

Two new species of Spiochaetopterus (Chaetopteridae: Polychaeta), S. sanbanzensis, from Sanbanze, off Ichikawa and Funabashi Cities, Tokyo Bay, and S. izuensis from the shallow waters of Sagami Bay, were described. The most obvious difference is the number of segments in region A: 9 in S. sanbanzensis and 10 in S. izuensis. In addition, Spiochaetopterus sanbanzensis has elliptical light brown or blackish eye-spots, asymmetrical cordate specialized A4 chaetae, and a color pattern consisting of many dispersed brown spots on both ventral and dorsal faces of region A. In Spiochaetopterus izuensis, a brown band extends from each eye-spot to the level of the A1 chaetae; the convex ventral edge of the head of the specialized A4 chaeta has an oblique section and the color pattern of the body is absent. A comparison is established between these two new species and other known species from Indo-Pacific Ocean.

Animals↗

PubMedDate not supplied

Jahnula species from North and Central America, including three new species.

Three new species of loculoascomycetes collected from freshwater habitats in North America are described as new species of Jahnula (Jahnulales, Dothideomycetes). All three share these morphological features: hyaline to blackish translucent, membranous ascomata with subtending, wide, septate brown, spreading hyphae; peridia composed of large angular cells; hamathecium of septate pseudoparaphyses; 8-spored, clavate to cylindrical asci; and 1-septate, broadly fusiform, brown, multiguttulate ascospores. Four additional species, J. aquatica, J. bipolaris, J. potamophila, and J. seychellensis, are reported for the first time from the western hemisphere.

Ascomycota↗

PubMed2000

A new species of rainfrog of the Eleutherodactylus milesi species group (Anura: Leptodactylidae) from Guatemala.

A new rainfrog of the Eleutherodactylus milesi group is described from the Sierra de Xucaneb, Guatemala. It is compared to the other 11 upland species from southern Mexico, Guatemala and Honduras referred to the group. Within the milesi group the new species differs from the other five forms which also have toe fringes in size of the finger disks, the snout shape in profile and the amount of toe webbing and dorsal tuberculation. Difficulties in distinguishing among the character states for the tympanum (distinct, indistinct and hidden) and between toe ridges and fringes indicate that very subtle differences separate recognized species.

Animals↗

PubMed1979

Species restriction of the mitogenicity induced by lanatoside C. Lymphocyte activation by digitalis glycosides is confined to cells from digitalis resistant species.

Activation of Na+, K+-ATPase has previously been suggested to be the triggering signal in mitogen-induced cell activation. Using a digitalis glycoside known to be a potent polyclonal B-cell activator, this hypothesis could be tested since digitalis activates ATPase at different concentrations in various species, depending on the degree of sensitivity to the toxic effects of glycosides. Lanatoside C was found to stimulate lymphocytes from glycoside resistant species such as rat, mouse and hamster. The possible involvement of Na+, K+-ATPase was made less likely by the similarity in dose--response profile in these cells although they have been reported to display varying degrees of glycoside resistance. Furthermore, using lymphocytes from digitalis-sensitive species such as man, guinea-pig or rabbit, no mitogenicity could be recorded, strongly suggesting a lack of correlation between glycoside-induced effects on Na+, K+-ATPase and cell activation.

Adenosine Triphosphatases↗

PubMedDate not supplied

[Species differentiation by placental morphology with human and animal tissue. A contribution to species determination in relation to embryo findings].

On the occasion of an embryo being found with attached placenta, species differentiation of the fetus was to be carried out within the framework of a preliminary proceeding. Consulted gynecologists diagnosed a human embryo. From the macroscopic and histologic structure of the placenta, our investigations resulted a species diagnosis of an embryo belonging to the order Carnivora (cat). The diversity of external placental shapes as well as of different histologic structures permit species differentiation. The delimitation of the human embryo from nonhuman tissue should always be possible, even on formalin-fixed material.

Animals↗

PubMed1984

Species-restricted target cell lysis by human complement: complement-lysed erythrocytes from heterologous and homologous species differ in their ratio of bound to inserted C9.

The cytolytic efficiency of the terminal complement complex (C5b-9) against erythrocytes of different species is, in part, dependent on the species of C9 origin. In the present study, we have examined the interaction of C9 with erythrocytes in terms of the binding, dimerization, and insertion of C9 into the membranes of sheep and human erythrocytes lysed by human complement (C). The membranes of these C-lysed erythrocytes were analyzed for bound, dimerized, and inserted C9 by a combination of photolabeling, SDS-PAGE, electroblotting, and immunostaining techniques. We found that neither binding nor dimerization of C9 could be correlated with the relative hemolytic efficiency of human C on these erythrocytes, but that C9 insertion into the membranes of these cells varied in direct relation to the extent of lysis. Interestingly, the binding of C3 to these cells under conditions of equivalent C1 fixation also correlated with lytic efficiency. These data indicate that the C9-related differences in the cytolytic efficiency of C against erythrocytes from different species is primarily due to the efficiency of C9 insertion into these cells. Moreover, these data emphasize that neither the binding of C9 to a target membrane nor the formation of C9 dimers necessarily leads to the insertion of C9 into the membrane, suggesting the presence of membrane-bound but inactive C5b-9 complexes. Because the extent of C3 binding also correlated with the relative degree of lysis of sheep vs human erythrocytes, the possibility exists that surface-bound C3 may regulate hemolysis by directing the insertion of C9 in terminal complexes into cells.

Animals↗

PubMed1998

Candida ipomoeae, a new yeast species related to large-spored Metschnikowia species.

Numerous strains of an unusual asexual yeast species were isolated from flowers of morning glory (Ipomoea spp., Convolvulaceae) and associated drosophilids and sap beetles of the genus Conotelus sampled in Hawaii and in Brazil. The nutritional profile of this yeast is similar to those of Metschnikowia hawaiiensis and Metschnikowia continentalis, which share the same habitats. The cells are large, hydrophobic, and tend to remain attached after budding, causing the colonies on agar media to have a convoluted appearance, reminiscent of popcorn. The sequences of the D1/D2 domain of large subunit rDNAs of strains from three different localities confirmed that a single species is involved, and that it is related to large-spored Metschnikowia species. The type strain is UWO(PS)91-672.1 (CBS 8466).

Base Sequence↗

PubMedDate not supplied

[Species-specific odor in closely related species: period of development in ontogenesis of house (Mus musculus musculus) and mound-building (Mus spicilegus) mice].

In two-choice odor tests, it was shown that house and mound-building mice began to discriminate the species-specific odor of young at the age of 17 days. The mice investigated the odor of conspecific urine significantly longer than that of heterospecific urine, when the young donors of urine, were 17 days old or older. Thus, the species-specific odor appears in ontogenesis of these species on the 17th day of life.

Animals↗

PubMed1994

Multi-species risk analysis, species evaluation and biodiversity conservation.

The multi-species conservation approaches starting from Vane-Wright et al. (1991) search for a biologically valid basis to evaluate biodiversity. Such evaluations can be used to optimize reserve boundaries so reserves contain a high level of biodiversity. However, these optimization procedures do not minimize the future loss of biodiversity. We provide a method that can be used to minimize the loss of biodiversity. The method integrates an evolutionary species evaluation with an ecological multi-species risk analysis to estimate the expected loss of phylogenetic diversity. A minimization of this loss will optimize the preservation of phylogenetic diversity.

Biological Evolution↗

PubMed2001

Coevolutionary interactions between a haploid species and a diploid species.

We investigate a general model describing coevolutionary interaction between a haploid population and a diploid population, each with two alleles at a single locus. Both species are allowed to evolve, with the fitness of the genotypes of each species assumed to depend linearly on the frequencies of the genotypes of the other species. We explore the resulting outcomes of these interactions, in particular determining the location of equilibria under various conditions. The coevolution here is much more complex than that between two haploid populations and allows for the possibility of two polymorphic equilibria. To allow for further analysis, we construct a semi-symmetric model. The variety of outcomes possible even in this second model provides support for the geographic mosaic theory of coevolution by suggesting the possibility of small local populations coevolving to very different outcomes, leading to a shifting geographic mosaic as neighboring populations interact with each other through migration.

Alleles↗

PubMed2003

Descriptions of two new species of the genus Tachygonetria Wedl, 1862 (Nematoda-Pharyngodonidae) and discussion of the relationships among the species of the genus.

Two species of pinworm, parasites of Testudo graeca Linneaus, 1758 from Morocco, are described: Tachygonetria poulini sp. nov. and Tachygonetria settatensis sp. nov. Light and scanning electron microscopy studies revealed morphological differences in the structure of the cephalic end in both sexes, as well as in the structure of the caudal end in the male, which enabled us to differentiate these species from others, and from each other. The relationships among the species of the genus Tachygonetria are discussed.

Animals↗

PubMed1996

The metacercariae of sibling species of Meiogymnophallus, including M. rebecqui comb. nov. (Digenea: Gymnophallidae), and their effects on closely related Cerastoderma host species (Mollusca: bivalvia).

The morphology and ecology are described for four sibling species of digenean metacercariae: Meiogymnophallus minutus (Cobbold 1859), M. strigatus (Lebour 1908) from the estuarine cockle Cerastoderma edule L. and M. fossarum (Bartoli, 1965) and M. rebecqui (Bartoli, 1983) comb. nov. from the brackish water lagoon cockle C. glaucum (Poiret). Although occupying different sites within the two species of cockle, both M. minutus and M. fossarum infections result in pathological effects that may cause heavy host mortality. Remarkably, they also result in an inversion of the cockles in situ in the sand such that predation by the final host species is enhanced.

Animals↗

PubMed1987

Heavy metal concentrations in the liver of three duck species: influence of species and sex.

To investigate interspecific and intersex differences in heavy metal levels, we analysed concentrations of cadmium, cobalt, chromium, copper, lead, mercury, manganese, nickel and zinc in the livers of male and female black duck (Anas rubripes), mallard (A. platyrhynchos) and greater scaup (Aythya marila) collected in Raritan Bay, New Jersey in December 1980 and January 1981. Certain metal levels varied significantly by species and sex. In all species, Zn and Cu had the highest concentrations, and Cd, Co, and Hg were lowest in all three species. Scaup had significantly higher levels of Cu than black ducks and mallards, and mallards had significantly higher levels of Mn and Zn than black duck and scaup. Overall, eight of nine metal levels were higher in male than female black duck. In scaup, females had significantly higher levels of Pb and Mn than males. In black ducks, males had significantly higher levels of Cu, Mn and Zn than females. The sample of mallard was too small to test intersex differences.

Journal Article↗

PubMed1991

Evaluation of root quality of Bupleurum species by TLC scanner and the liver protective effects of "xiao-chai-hu-tang" prepared using three different Bupleurum species.

A simple and quick quantitative analysis of saikosaponins a, c and d, the major bioactive principles contained in Bupleurum species, by TLC scanner is described. Results with Bupleurum kaoi, the species native to Taiwan, showed that the roots, rhizomes and aerial parts (leaves and stem) have greater quantities of saikosaponins than cultivated B. falcatum var. komarowi and imported B. chinense. The liver protective effects of water extracts of "Xiao-Chai-Hu-Tang" (XCHT), a mixture of seven crude drugs, prepared using roots of the three different Bupleurum species and aerial parts of B. kaoi and B. falcatum var. komarowi, were evaluated using CCl4-induced toxicity in rats. The acute increase of serum transaminase (SGOT and SGPT) levels caused by CCl4 administration (3.0 ml/kg, s.c.) was dramatically reduced when treated with XCHT prepared with the roots of B. kaoi. The histological metamorphoses such as fatty changes, ballooning degeneration, cell necrosis and lymphocyte and Kupffer cell increases around the central vein, were clearly decreased by XCHT prepared with B. kaoi. Furthermore, water extracts of aerial parts of both B. kaoi and cultivated B. falcatum var. komarowi decreased SGOT and SGPT levels and moderately reduced the pathological changes.

Animals↗

PubMed2005

Evolutionary relationships between the former species Saccharomyces uvarum and the hybrids Saccharomyces bayanus and Saccharomyces pastorianus; reinstatement of Saccharomyces uvarum (Beijerinck) as a distinct species.

Analysis of the nucleotide sequence of the GDH1 homologues from Saccharomyces bayanus strain CBS 380T and S. pastorianus strains showed that they share an almost identical sequence, SuGDH1*, which is a diverged form of the SuGDH1 from the type strain of the former species S. uvarum, considered as synonym of S. bayanus. SuGDH1* is close to but differs from SuGDH1 by the accumulation of a high number of neutral substitutions designated as Multiple Neutral Mutations Accumulation (MNMA). Further analysis carried out with three other markers, BAP2, HO and MET2 showed that they have also diverged from their S. uvarum counterparts by MNMA. S. bayanus CBS 380T is placed between S. uvarum and S. pastorianus sharing MET2, CDC91 sequences with the former and BAP2, GDH1, HO sequences with the latter. S. bayanus CBS 380T has been proposed to be a S. uvarum/S. cerevisiae hybrid and this proposal is confirmed by the presence in its genome a S. cerevisiae SUC4 gene. Strain S. bayanus CBS 380T, with a composite genome, is genetically isolated from strains of the former S. uvarum species, thus justifying the reinstatement of S. uvarum as a distinct species.

Base Sequence↗