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PubMed1985

Physical and chemical correlates of microbial activity and biomass in composting municipal sewage sludge.

Various physical and chemical parameters were monitored to evaluate their influence on the microbial communities present in composting municipal sewage sludge. Temperature, moisture content, depth, pH, protein content, total nitrogen, total carbon, lipid phosphate biomass, and the rates of microbial incorporation of substrates into lipids were measured at several times throughout the 17- to 19-day composting runs. Temperature was found to have the most consistent and dramatic effect on microbial activity and biomass. When temperatures exceeded 55 to 60 degrees C, microbial activity fell dramatically, usually by more than 1 order of magnitude. Microbial activity was generally greatest in samples taken from the 35 to 50 degrees C areas of the composting piles. Changes in the composition of the compost over time included increased pH, increased protein content, and decreased total organic content. The changes in these parameters appeared to reflect the microbial activity and biomass present. The results of this study indicate that the rate of composting may best be optimized by controlling the composting temperatures, provided that the other parameters fall within reasonable limits in the starting material.

Journal Article↗
PubMed1998

Vegetation Composition Determines Microbial Activities in a Boreal Forest Soil.

Abstract Forest soil ecology was studied in Fennoscandinavian dry Scots pine forests grazed by reindeer to varying extents (ungrazed, lichen-dominated-sites; grazed sites; and bryophyte-dominated sites). We hypothesized that the productivity parameters of the site (i.e., tree growth and soil nutrient concentrations), the vegetation composition, and the microbial activities are directly correlated. Since the productivity of the lichen-dominated ecosystem is low, microbial activities are assumed to be naturally low. Grazing was expected to decrease both the amount of Scots pine fine roots and the soil microbial activities. Several variables on the characteristics of the soil microbial community, Scots pine fine roots, soil nutrients, and tree growth were studied in relation to vegetation composition by using non-metric multidimensional scaling (NMDS). Basal respiration (Bas), metabolic quotient of the microbial community (qCO2), and pine fine root parameters increased toward the ungrazed, nutrient-poor, lichen-dominated sites, which were grouped at one end of the first axis in the NMDS ordination. Soil nutrient and tree growth parameters and thickness of the humus layer increased toward bryophyte-dominated sites, which were grouped at the other end of the first axis in the ordination. The grazed sites fell between them. These were characterized by lower Bas and qCO2 values and longer lag, compared to ungrazed lichen- or bryophyte-dominated sites, probably due to decreased carbon input and microclimatic change (the soil without lichen carpet is exposed to direct sunlight and wind). Microbial biomass (Cmic), fungal biomass (ergosterol concentration), and the specific growth rate (µCO2) were not related to vegetation ordination. The high fine root production is the most plausible explanation for the high microbial activities at nutrient-poor, lichen-dominated sites, which produce qualitatively poor and slowly decomposing litter, as fine roots secrete considerable amounts of organic substances. At bryophyte-dominated sites, the higher soil nutrient concentrations and the higher production of easily decomposable substrates are likely to maintain the microbial activities.

Journal Article↗
PubMedDate not supplied

Effect of roundup ultra on microbial activity and biomass from selected soils.

Herbicides applied to soils potentially affect soil microbial activity. The quantity and frequency of Roundup Ultra [RU; N-(phosphonomethyl)glycine; Monsanto, St. Louis, MO] applications have escalated with the advent of Roundup-tolerant crops. The objective of this study was to determine the effect of Roundup Ultra on soil microbial biomass and activity across a range of soils varying in fertility. The isoproplyamine salt of glyphosate was applied in the form of RU at a rate of 234 mg active ingredient kg(-1) soil based on an assumed 2-mm glyphosate-soil interaction depth. Roundup Ultra significantly stimulated soil microbial activity as measured by C and N mineralization, as well as soil microbial biomass. Cumulative C mineralization as well as mineralization rate increased above background levels for all soils tested with addition of RU. There were strong linear relationships between C and N mineralized, as well as between soil microbial C and N (r2 = 0.96 and 0.95, respectively). The slopes of the relationships with RU addition approximated three. Since the isopropylamine salt of glyphosate has a C to N ratio of 3:1, the data strongly suggest that RU was the direct cause of the enhanced microbial activity. An increase in the C mineralization rate occurred the first day following RU addition and continued for 14 d. Roundup Ultra appeared to be rapidly degraded by soil microbes regardless of soil type or organic matter content, even at high application rates, without adversely affecting microbial activity.

Biomass↗
PubMed2005

Use of microelectrodes to investigate the effects of 2-chlorophenol on microbial activities in biofilms.

In order to assess the applicability of using microelectrodes as a tool for inhibition tests, temporal and spatial inhibitory effects of 2-chlorophenol (2-CP) on O(2) respiration and nitrification activities in municipal wastewater biofilms were investigated using microelectrodes for O(2) and NH(4)(+). The time-course microelectrode measurements demonstrated that 2-CP inhibited O(2) respiration and nitrification activities within 6-18 min. The microbial activities were inhibited only in the upper 400 microm of the biofilms by 2-CP, and the bacteria present in the deeper parts of the biofilms were still active, probably due to limited penetration of 2-CP. These results could reasonably explain the difference in inhibitory ratios of the O(2) respiration and nitrification activities in the biofilms. O(2) respiration activity was incompletely inhibited, which was attributed to the presence of O(2) respiration activities in the deeper parts of the biofilm. In contrast, nitrification activity was significantly inhibited because ammonia-oxidizing bacteria were present in the upper parts of the biofilm. These results indicate that the microelectrodes with a very quick response time and a high spatial resolution are useful tools to study temporal and spatial inhibitory effects of inhibitors on in situ microbial activities in biofilms.

Bacterial Physiological Phenomena↗
PubMed2007

Metabolically active microbial communities in uranium-contaminated subsurface sediments.

In order to develop effective bioremediation strategies for radionuclide contaminants, the composition and metabolic potential of microbial communities need to be better understood, especially in highly contaminated subsurface sediments for which little cultivation-independent information is available. In this study, we characterized metabolically active and total microbial communities associated with uranium-contaminated subsurface sediments along geochemical gradients. DNA and RNA were extracted and amplified from four sediment-depth intervals representing moderately acidic (pH 3.7) to near-neutral (pH 6.7) conditions. Phylotypes related to Proteobacteria (Alpha-, Beta-, Delta- and Gammaproteobacteria), Bacteroidetes, Actinobacteria, Firmicutes and Planctomycetes were detected in DNA- and RNA-derived clone libraries. Diversity and numerical dominance of phylotypes were observed to correspond to changes in sediment geochemistry and rates of microbial activity, suggesting that geochemical conditions have selected for well-adapted taxa. Sequences closely related to nitrate-reducing bacteria represented 28% and 43% of clones from the total and metabolically active fractions of the microbial community, respectively. This study provides the first detailed analysis of total and metabolically active microbial communities in radionuclide-contaminated subsurface sediments. Our microbial community analysis, in conjunction with rates of microbial activity, points to several groups of nitrate-reducers that appear to be well adapted to environmental conditions common to radionuclide-contaminated sites.

Biodegradation, Environmental↗
PubMed2003

The influence of temperature and moisture contents regimes on the aerobic microbial activity of a biosolids composting blend.

To understand the relationships between temperature, moisture content, and microbial activity during the composting of biosolids (municipal wastewater treatment sludge), well-controlled incubation experiments were conducted using a 2-factor factorial design with six temperatures (22, 29, 36, 43, 50, and 57 degrees C) and five moisture contents (30, 40, 50, 60, and 70%). The microbial activity was measured as O2 uptake rate (mg g(-1) h(-1)) using a computer controlled respirometer. In this study, moisture content proved to be a dominant factor impacting aerobic microbial activity of the composting blend. Fifty percent moisture content appeared to be the minimal requirement for obtaining activities greater than 1.0 mg g(-1) h(-1). Temperature was also documented to be an important factor for biosolids composting. However, its effect was less influential than moisture content. Particularly, the enhancement of composting activities induced by temperature increment could be realized by increasing moisture content alone.

Bacteria, Aerobic↗
PubMed2006

Degradation of pyrimethanil in soil: influence of light, oxygen, and microbial activity.

The research was carried out in order to verify the influence that light, oxygen, and microbial activity have on the degradability of pyrimethanil (PYR) in soil. The products of degradation were also identified and their evolution in time evaluated. The results indicate that the molecule is more persistent in the absence of light, oxygen, and microbial activity. The order of importance of these three factors is as follows: light < microbial activity < oxygen. The following products of degradation were identified: (1) benzoic acid, (2) cis,cis-muconic acid, (3) hydroxyl-4,6-dimethyl-2-pirimidinamine, (4) N'-ethyl-N-hydroxyformamidine, and (5) 4,6-dimethyl-2-piridinamine, which appeared different from those reported in literature for the degradation of PYR in abiotic conditions. This result suggests that the degradation in soil is mainly biotic.

Adsorption↗
PubMed1985

Influence of deep ocean sewage outfalls on the microbial activity of the surrounding sediment.

The microbial activity near two deep ocean sewage outfalls off the coast of the island of Oahu, Hawaii, was characterized. Water samples and sediment samples to a depth of 4.5 cm were analyzed from an area of approximately 4.5 x 10 m surrounding the outfalls. Although the effluent water at both sites exhibited heterotrophic activity that was 2 orders of magnitude greater than water from a control site, ambient water samples taken within 1 m of the discharge ports exhibited activity only twice that of the control water. The heterotrophic activity of the outfall sediment was only elevated above that of the control site for surface samples collected within 10 m of the outfall. Likewise, the rates of microbial nucleic acid synthesis and carbon production in the sediment were only elevated immediately adjacent to the outfalls. Total microbial biomass, as determined by the ATP content of the sediment, varied spatially but was generally elevated at the outfall sites. The specific growth rates calculated for the sediment microbial populations, however, were not greater at the outfall sites. At one site the rocks surrounding the diffuser pipe were covered with copious amounts of slime that appeared to be composed entirely of microbial cells and filaments. This microbial mat was extremely active with respect to heterotrophic activity and biomass production. Overall, it appears that the impact of the sewage discharge on the ambient seawater microbiota is slight and that the effect on the sediment microbiota is confined to an area immediately adjacent to the diffuser ports. In the sand itself, the effect is limited to the upper 2 cm at most.

Journal Article↗
PubMed1982

Influence of diet and microbial activity in the digestive tract on digestibility, and nitrogen and energy metabolism in rats and pigs.

1. Balance trials with respiration measurements were performed with twelve rats and twelve pigs given either low- or high-crude-fibre diets. There were six collection periods with the rats over a live-weight range of 86-264 g and three collection periods with the pigs over a live-weight range of 30-55 kg. Measurements were made on the influence of microbial activity in the digestive tract on digestibility and nitrogen and energy metabolism. Dietary inclusion of the antibiotic Nebacitin was the method used to reduce the microbial population. 2. The microbial activity in the hind-gut (mumol ATP/g air-dry contents) of antibiotic-treated rats was reduced to approximately one-tenth of that of untreated rats. 3. Live-weight gain was not significantly affected in either species by a reduction in the microbial activity, in spite of a reduction in dry matter digestibility in animals with reduced microflora. 4. For rats on low-crude-fibre diets, a reduction in microflora reduced digestibility of all nutrients and energy and metabolizability of digestible energy by approximately 5.4%. All differences were highly significant. On high-crude-fibre diets the decrease was approximately 5.9%. In pigs on both crude fibre levels, the digestibility was also influenced by the level of microflora, but the pattern was somewhat different from that obtained with rats, with the Nebacitin treatment increasing the digestibility of N slightly, and the digestibility of fat markedly. 5. Retained N in rats reached a maximum when the rats were approximately 60 d old and thereafter decreased with increasing age. However, for pigs daily N retention increased with age. The retained N: digested N value decreased linearly with age in the rats, but varied little with age over the range (104-146 d) studied in the pigs. 6. The metabolizability of gross energy (metabolizable energy (ME): gross energy) was significantly reduced with an increase in crude fibre level and by the addition of Nebacitin. 7. Retained energy (RE) in relation to ME (RE:ME), was not significantly affected either by level of microbial activity or by crude fibre. 8. The ratio, RE as fat (RF): RE as protein (RP) increased as the animals grew. In the rat experiment there was a tendency for RP to be higher for animals with normal microflora than for animals with reduced microflora for both crude fibre levels. 9. With rats, the regression analyses indicated that the energy requirement for maintenance could be influenced by both the level of microbial activity in the digestive tract and by the level of fibre in the diet. The net availability of ME for maintenance and growth by rats averaged 0.72 for all treatments. 10. The net availability of ME for growth in the pigs averaged 0.65 for all treatments.

Aging↗
PubMed1977

Comparison between two methods of assaying relative microbial activity in marine environments.

Two methods for determining relative microbial activity in the marine environment were compared. In one method, a single concentration of a labeled substrate was used to calculate rates of substrate utilization; in the other, multiple concentrations of the same substrate (heterotrophic activity method) were used to calculate maximum potential substrate utilization rates. These studies were made on 232 seawater and 79 sediment samples taken from a variety of marine environments. The highest correlations between these two methods were seen in the sediment samples tested. The lowest correlation coerfficient seen in the sediment samples was 0.90, and the highest was 0.98. In seawater samples (six studies), the lowest correlation coefficient was 0.77 and the highest was 0.95. The correlation between these two methods was also substrate concentration dependent. Higher correlation coefficients were observed when higher substrate concentrations were used. Under certain conditions, these two methods appear to be comparable for estimating relative levels of microbial activity in the marine environment.

Antarctic Regions↗
PubMed1978

Relative microbial activity and bacterial concentrations in water and sediment samples taken in the Beaufort Sea.

A total of 91 water, 8 ice, and 50 sediment samples taken from the southwestern Beaufort Sea were analyzed for relative microbial activity, bacterial cell concentrations, and percentage of respiration (mineralization). These samples were taken during three field-study periods (August to September 1975; April 1976; and August 1976). Both the relative microbial activity and the cell concentrations in water and sediment samples were lower during the April (winter) sampling period than in the August-September (summer) studies. The percentage of respiration of labeled glutamic acid was higher in the winter water samples than in the summer samples. The water samples showed higher percentage of respiration values than did sediment samples. The average maximimum potential rate of glutamic acid uptake was as high or higher than those observed in studies made in more temperate waters. Samples of melted sea ice showed levels of relative microbial activity that were about the same as that found in the associated seawater. When 1:1 mixtures of melted ice and seawater were analyzed for altered microbial activity, little effect could be detected.

Alaska↗
PubMed1991

[Lactose--a potential dietary fiber. The regulation of its microecologic effect in the intestinal tract. 3. Dietary fiber actions of lactose due to microbial activity].

The activity of the mucosal beta-galactosidase of caecum and colon is low in both germfree and conventional rats. beta-Galactosidase activity occurs also in the chymus of germfree rats. It increases after monoassociation and is higher in conventional than in germfree animals. Lactose entering caecum and colon acts like dietary fibre and is hydrolysed mainly by the intestinal flora. Aerobe lactobacilli and bacteroides predominate in the microflora of rat caecum and colon. A lactose-containing diet increases the total number of germs and stimulates the growth of bifidobacteria. After special diets, rich in lactose and low in protein and phosphate (e.g. human milk and similar formulae), the number of bacteroides and other putrefactive germs decreases. Moreover, a lactose-containing diet alters the metabolic activity of intestinal microorganisms (activity of microbial beta-galactosidase, acidification and lowering of ph in the chymus, production of hydrogen, proteolytic activity.) Lactose as dietary fibre decreases the nitrogen excretion in the urine and increases the N-excretion in the faeces of conventional rats.

Animals↗
PubMed2006

Rhizosphere microbial activity during phytoremediation of diesel-contaminated soil.

To know microbial activity and diesel-removal efficiency influencing through plant roots, we examined the effect of the rhizosphere on phytoremediation of diesel-contaminated soils by alfalfa (Medicago sativa L.). Pots were treated with and without diesel and allowed to stabilize for 7 weeks, at which time four experimental/control groups were prepared: (1) planted diesel-contaminated soil, (2) unplanted diesel-contaminated soil, (3) planted uncontaminated soil, and (4) unplanted uncontaminated soil. Samples of rhizosphere and bulk soils were separately taken from all planted pots. After 7 weeks of alfalfa growth from seeds, the removal efficiencies in rhizosphere and bulk soil samples were 82.5% and 36.5 approximately 59.4%, respectively. The total microbial activity was highest in diesel-contaminated rhizosphere soils. Significantly more culturable soil bacteria and hydrocarbon-degraders were found in diesel-contaminated rhizosphere soil versus unplanted and uncontaminated bulk soil, with a greater increase seen in hydrocarbon-degraders (172-fold) versus general soil bacteria (14-fold). DGGE (Denaturing Gel Gradient Electrophoresis) analysis revealed that the bacterial community structure was most highly influenced by the combined presence of diesel contamination and plant roots (39.13% similarity compared to the control), but that diesel contamination alone had a higher influence (42.31% similarity compared to the control) than the rhizosphere (50.00% similarity compared to the control). Sequence analysis and BLAST searches revealed that all samples were dominated by members of alpha -, gamma -, delta - and epsilon -proteobacteria, and Chloroflexi. The rhizosphere samples additionally contained novel dominant members of alpha -proteobacteria and Cytophaga-Flexibacter-Bacteroides, while the diesel samples contained additional dominant alpha -proteobacteria and the rhizosphere plus diesel samples contained other epsilon -proteobacteria. Collectively, these findings indicate that the presence of plant roots (i.e., a rhizosphere) had a greater effect on bacterial activity in diesel contamination than did the absence of diesel contamination, whereas diesel contamination had a greater effect on bacterial community structure. These novel findings provide new insight into the mechanisms of phytoremediation.

Biodegradation, Environmental↗
PubMed2001

Comparative measurements of microbial activity in drinking water biofilters.

Tetrazolium reduction assays, phospholipid analysis, and 16S rRNA (rDNA) sequence analysis were applied to assess the distribution, composition and activity of microbial communities developing in biofilters treating non-ozonated and ozonated drinking water. The response of media-attached biomass to both operating temperature (3 degrees C vs. > 12 degrees C) and ozone application point was assessed. As judged by 2-(p-iodo-phenyl)-3-(p-nitrophenyl)-s-phenyl tetrazolium chloride (INT) reduction, the dehydrogenase activity in biofilter systems that were operated with non-ozonated water was 55% lower than in identical filters operating with ozonated water. There was no significant difference between the microbiological activity measured in a biofilter series treating ozonated water and an identical series where ozonated water was introduced at an intermediate point. The biomass levels in biofilter systems that were operated with ozonated water were 47% higher on average than identical systems operated with non-ozonated water. Operating temperature had no significant impact on total biomass levels; however, specific dehydrogenase activity was 70% higher in systems operated at ambient temperatures (> 12 degrees C) than in systems held at 3 degrees C. Phospholipid and rDNA analysis suggests that there was a community structure response to ozone application and operating temperature, but no response to different ozone application points.

Biomass↗
PubMed1991

Accumulation of plasma cells in inflamed sites: effects of antigen, nonspecific microbial activators, and chronic inflammation.

Plasma cells are common in chronically inflamed sites, including periodontal lesions. The aim of this study was to determine which factors contribute to this local accumulation of plasma cells. Specifically, we sought to evaluate the effects of specific antigen and nonspecific activators from an infectious agent associated with chronic inflammation (Fusobacterium nucleatum, an organism prominent in chronic periodontal lesions) and the effect of the chronic inflammation itself. Chronic inflammation (14 to 17 days) was induced in horseradish peroxidase (HRP)-immune rabbits by subcutaneous injection of 50 microliters of sterile alum in several sites in their backs. Controls included sites injected with saline or more acute sites examined after 3 days of alum inflammation. Sites were challenged with HRP (the antigen), sonicated F. nucleatum (the nonspecific activator), or both together to see whether F. nucleatum has an adjuvant effect. Three days after challenge, HRP-specific antibody-forming cells (AFC) were enumerated after peroxidase histochemistry. In noninflamed sites or sites with acute inflammation, virtually no HRP-specific AFC were evident. In contrast, chronic inflammation alone was sufficient to elicit a specific AFC response (congruent to 10 cells per mm2). Addition of either F. nucleatum or HRP to the chronic lesion about doubled the number of HRP-specific AFC. However, a dramatic 8- to 15-fold (80 to 150/mm2) increase was seen in chronically inflamed sites challenged with antigen and activator together. Interestingly, the activator did not have this adjuvant effect in the acute sites or in normal skin. In short, accumulation of plasma cells in inflamed sites is promoted by chronic inflammation, activators of microbial origin, and specific antigen. This milieu can be expected to develop in some periodontal lesions and could help explain why gingival crevicular fluid from some sites may contain extraordinary levels of locally produced specific antibodies for certain antigens.

Acute Disease↗
PubMed2005

Two-dimensional distribution of microbial activity and flow patterns within naturally fractured chalk.

The two-dimensional distribution of flow patterns and their dynamic change due to microbial activity were investigated in naturally fractured chalk cores. Long-term biodegradation experiments were conducted in two cores ( approximately 20 cm diameter, 31 and 44 cm long), intersected by a natural fracture. 2,4,6-tribromophenol (TBP) was used as a model contaminant and as the sole carbon source for aerobic microbial activity. The transmissivity of the fractures was continuously reduced due to biomass accumulation in the fracture concurrent with TBP biodegradation. From multi-tracer experiments conducted prior to and following the microbial activity, it was found that biomass accumulation causes redistribution of the preferential flow channels. Zones of slow flow near the fracture inlet were clogged, thus further diverting the flow through zones of fast flow, which were also partially clogged. Quantitative evaluation of biodegradation and bacterial counts supported the results of the multi-tracer tests, indicating that most of the bacterial activity occurs close to the inlet. The changing flow patterns, which control the nutrient supply, resulted in variations in the concentrations of the chemical constituents (TBP, bromide and oxygen), used as indicators of biodegradation.

Aerobiosis↗
PubMed2002

Effect of microbial activity on the mobility of chromium in soils.

The effect of microbial activity on the chemical state of chromium, in a contaminated soil located in the Rhĵne-Alpes region (France), has been investigated. This soil contained 4,700 mg kg(-1) Cr, with about 40% present in the soluble hexavalent form. Indigenous microbial activity was found to significantly reduce Cr(VI) to the less mobile form (III) when the soil was incubated at 30 degrees C in an aqueous medium containing glucose and nutrients. A Cr(VI)-reducing strain of Streptomyces thermocarboxydus was isolated from the contaminated soil. The strain was found to metabolize Cr(VI) in a similar manner as an exogenous inoculum of Pseudomonas fluorescens LB300, and to precipitate chromium as a Cr oxyhydroxide with a gammaCrOOH-like local structure. The Cr(VI)-reducing activity of S. thermocarboxydus was induced, or significantly accelerated, by the aggregation of bacterial cells or their adhesion to suspended solid particles, and was stimulated in pure culture by glycerol and chromate.

Biodegradation, Environmental↗
PubMed1987

[Radiolysis and variation of anti-microbial activity of gamma-irradiated acrinol aqueous solution on radiosterilization].

The investigations about the radiolysis materials and their quantities, and, anti-microbial activities of gamma-irradiated (in the ranges of 0.516-2.064 kC/kg (2-8 MR] acrinol on liquid dosage form have been carried out to study the application of radiosterilization. About nine components were found as radiolysis materials. Most of them were also found in the UV-irradiated of Fenton's reagent-treated acrinol solution. Increase of anti-microbial activity was observed with gamma-irradiated acrinol solutions, but this phenomenon was not long-lasting. The micro-organism such as Pseudomonas aeruginosa or Staphylococcus aureus that infect at the lips of wound are highly sensitive to the gamma-irradiation. They are almost sterilized by the irradiation of 10 kGy (1.0 Mrad). At a low acrinol concentration, the decomposition rate of acrinol by the irradiation was relatively high. When 1.0% of acrinol solution was irradiated at a dose of 10 kGy (1.0 Mrad), the decomposition of the drug was less than 2% and the variation of anti-microbial activity was negligible.

Acridines↗