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PubMed2002

Isolation and characterization of a motile hydrogenotrophic methanogen from rice paddy field soil in Japan.

A hydrogenotrophic motile methanogen was isolated from flooded Japanese paddy field soil. Anaerobic incubation of the paddy soil on H(2)-CO(2) at 20 degrees C led to the enrichment of symmetrically curved motile autofluorescent rods. The methanogenic strain TM20-1 isolated from the culture was halotolerant and utilized H(2)-CO(2), 2-propanol-CO(2), or formate as a sole methanogenic substrate. Based on the 16S rRNA gene sequence similarity (94.8%) with Methanospirillum hungateii, and on the physiological and phenotypic characteristics, TM20-1 was suggested to be a newly identified species belonging to the genus Methanospirillum. This is the first report of isolation of the genus Methanospirillum strain from a rice paddy field.

Anaerobiosis↗
PubMed2004

DGGE method for analyzing 16S rDNA of methanogenic archaeal community in paddy field soil.

A denaturing gradient gel electrophoresis (DGGE) method for analyzing 16S rDNA of methanogenic archaeal community in paddy field soil is presented. Five specific primers for 16S rDNA of methanogenic archaea, which were modified from the primers for archaea, were first evaluated by polymerase chain reaction and DGGE using genomic DNAs of 13 pure culture strains of methanogenic archaea. The DGGE analysis was possible with two primer pairs (0348aF-GC and 0691R; 0357F-GC and 0691R) of the five pairs tested although 16S rDNA of some non-methanogenic archaea was amplified with 0348aF-GC and 0691R. These two primer pairs were further evaluated for use in analysis of methanogenic archaeal community in Japanese paddy field soil. Good separation and quality of patterns were obtained in DGGE analysis with both primer pairs. A total of 41 DNA fragments were excised from the DGGE gels and their sequences were determined. All fragments belonged to methanogenic archaea. These results indicate that the procedure of DGGE analysis with the primer pair 0357F-GC and 0691R is suitable for investigating methanogenic archaeal community in paddy field soil.

Archaea↗
PubMed2006

Estimation of pesticide runoff from paddy fields to rural rivers.

The runoff characteristics of pesticides from paddy fields to rural rivers were investigated over a period of three years in Hokkaido Prefecture, Japan. High pesticide concentrations were usually observed in rivers during pesticide application periods. In one year, the growth of rice seedlings slowed down after transplantation owing to low temperatures and lack of sunshine, and many farmers delayed herbicide application. In that year, high-concentration runoff of herbicides in rivers was observed 1-3 weeks later than in average years. The pesticide runoff rates ranged from 0.3% for fenthion to 42% for benfuresate. The runoff rates of pesticides applied post-flood were large. Furthermore, the larger the water solubility of the pesticide, the larger the runoff rate. The highest concentrations of herbicides in paddy water were observed on the day of application or 1-2 days later, and the concentrations decreased exponentially afterwards. The half-lives of the herbicides ranged from 1.2 days for pretilachlor and esprocarb to 5 days for simetryn; the concentrations of the herbicides in paddy water had decreased to 1/10 of their initial concentrations by about 7 days after application. Therefore, the runoff amounts of pesticides from paddy fields could be decreased by improving irrigation-water management.

Acetanilides↗
PubMed2006

Isolation and characteristics of methanosaeta in paddy field soils.

The population of filamentous acetate-utilizing methanogens in paddy field soils was 2.0 x 10(4) MPN/g dry soil in the submerged condition. They were able to form colonies in a deep agar medium, but not in a roll tube. Filamentous acetate-utilizing methanogens isolated from Kanagi, Japan (strain K-5) and Tsukuba, Japan (strain T-3) were divided into two types based on length of filaments. One type, strain K-5, formed a short chain which was dispersed easily by weak shaking. The other type, strain T-3, formed a long chain, which formed cotton-like flocs and was not dispersed by weak shaking. They had sheaths composed of a pair of adjacent membranes on the outside of the cell membranes. The 16S rRNA gene similarities of strain T-3 and K-5 to Methanosaeta concilii strain Opfikon were 100% and 99.5% respectively. Filamentous acetate-utilizing methanogens were also isolated from paddy field soils in various other regions of Japan. Our results suggest that Methanosaeta is universal in paddy soils and that it plays an important role in methane production from acetate.

Acetates↗
PubMed2007

The input-output balance of cadmium in a paddy field of Tokyo.

Field monitoring was practiced from 2001 to 2003 to evaluate the input (irrigation, atmospheric deposition, and fertilizer application) and the output (uptake and accumulation into the above-ground biomass of rice plants and leaching) of cadmium (Cd) in a contaminated paddy field in Tokyo. The cadmium concentrations of irrigated water, open-bulk precipitation, soil solution (leaching water), rice plants collected at the harvesting stage and the chemical fertilizer and the cow manure compost applied were determined. The Cd flux of each factor was calculated by multiplying the Cd concentration by the volume or mass of the media. The annual input-output balance of Cd in the paddy field in 2001 and 2002 was estimated to be -5.44 [corrected] g ha(-1) and -2.01 [corrected] g ha(-1), respectively, indicating the loss of Cd from the paddy field, although the losses accounted for only 0.24% [corrected] and 0.089% [corrected] of the total amount of Cd in the ploughed layer soil in 2001 and 2002, respectively. Among the factors involved, the input from fertilizers (including manure compost) and the output due to the uptake by rice plants played a major role in the balance. The former largely depended on the types and amounts of fertilizers applied, and the latter on the water management practices in the paddy field, such as flooding and drainage of the surface water.

Animals↗
PubMed2006

Evaluation of allelopathic potential and quantification of momilactone A,B from rice hull extracts and assessment of inhibitory bioactivity on paddy field weeds.

Rice (Oryza sativa L.) hull extracts were used in a bioassay to evaluate the allelopathic potential of rice on the germination and growth of barnyard grass (Echinochloa crus-galli P. Beauv. var. oryzicola Ohwi), to quantify momilactone A and B levels in rice hull germplasm and to assess the inhibitory bioactivity of momilactone A and B as a potential natural source of herbicide for weed control in paddy fields. Four varieties of weeds including E. crus-galli P. Beauv. var. oryzicola Ohwi, Monochoria vaginalis var. plantaginea, Scirpus juncoides, and Eleocharis kuroguwai were tested in the paddy field. Of 99 rice varieties, the top five including Noindari exhibited inhibition effects greater than 50% in average inhibition of dry weight (AIDW). Noindari among them exerted the strongest effect (55.6%). The next five in the ranking exhibited inhibition effects of greater than 40%. Also, 46 varieties had inhibition effects between 20 and 40%, and 29 varieties had inhibition effects greater than 10%. Fourteen varieties had very low inhibitory effects (less than 10%), the lowest of which was Heunbe (4.7%). These varieties showed a mean inhibition of 19.8% for germination rate (GR), 9.9% for germination percentage (GP), 16.6% for leaf dry weight (LDW), 38.9% for straw dry weight (SDW), and 26.8% for root dry weight (RDW). Rice varieties were classified into six categories based on their total momilactones (TMs) (momilactone A + momilactone B). The highest level of momilactone A was found in the Baekna rice variety (34.7 microg g(-1)), and Baekgwangok contained the highest level of momilactone B (37.8 microg g(-1)). In allelopathic potential with genetic properties and morphological characteristics, the total inhibition rate (TIR) was 18.3% for Korean rice varieties, 19.0% for middle maturing varieties, 17.8% for colorless hull varieties, 18.3% for awn varieties, and 19.0% for colorless awn varieties. In addition, Korean varieties showed higher TMs (4.5 microg g(-1)) as compared with varieties that were late maturing (4.4 microg g(-1)), had colorless hulls (4.1 microg g(-1)), awns (4.7 microg g(-1)), and colorless awns (4.8 microg g(-1)). Momilactone A levels were generally higher than momilactone B levels. Total inhibition rates on barnyard grass correlated with average inhibitions of germination (AIG) (r2 = 0.62***), AIDW (r2 = 0.92***), and were affected by the inhibition rate of GP (r2 = 0.57***). Regions of origin for rice varieties correlated with the AIG (r2 = -0.23***), and maturing time showed a positive correlation with SDW (r2 = 0.15**) and RDW (r2 = 0.19**). Levels of momilactones were also correlated with the region of origin (r2 = -0.32***), maturing time (r2 = 0.13***), and awns (momilactone A, r2 = 0.23***; momilactone B, r2 = 0.14**), suggesting that rice varieties with awns, Korean varieties, and varieties with later maturing times contain higher levels of momilactone. Also, the investigation of the momilactone A and B bioactivity (0, 250, 500, 1000, 2000, and 4000 g a.i./ha) for weed control in paddy fields indicated that momilactones A and B exhibited no toxicity (0 in all concentrations) against rice plants, and the inhibitory bioactivity on weeds with momilactone A was higher than that of momilactone B. When compared with no momilactone control, the highest inhibitory effect (50%) on E. crus-galli P. Beauv. var. oryzicola Ohwi was shown on the 14th day after the application of momiactone A. The inhibitory effect increased with the concentration of the compound from 250 to 4000 g a.i./ha. Furthermore, momilactone A showed greater suppression than momliactone B toward toward E. crus-galli P. Beauv. var. oryzicola Ohwi, M. vaginalis var. plantaginea, S. juncoides, and E. kuroguwai. In broad weed species, momilactone A showed the highest inhibitory effect (90% in 4000 g a.i./ha) on S. juncoides, 14 days after the application as compared with no momilactone control. Further studies on allelopathic effects and momilactones from the germplasm of rice varieties using genetic properties and morphological characteristics may facilitate the development of rice varieties with higher allelopathic potential. Momilactones A and B present in rice hulls may serve as a potential natural herbicide source for weed control in paddy fields reducing the dependence on synthetic herbicides.

Diterpenes↗
PubMed2003

Characteristics of an anaerobic, syntrophic, butyrate-degrading bacterium in paddy field soil.

The number of syntrophic butyrate-degrading bacteria in a flooded paddy field soil was 1.7 x 10(3) MPN/g dry soil. Butyrate was degraded to acetate and methane when paddy soils were incubated anaerobically with the addition of butyrate. However, butyrate degradation was completely suppressed by the addition of the specific inhibitor of methanogenesis, 2-bromoethanesulfonate (BES) to the soil. A hydrogen-using methanogen, strain TM-8, was isolated from flooded paddy field soil. Strain TM-8 was identified as Methanobacterium formicicum based on its physiology and phylogeny. Syntrophic butyrate-degrading bacteria were enumerated and isolated using strain TM-8. A syntrophic butyrate-degrading bacterium, strain TB-6, was isolated in coculture with strain TM-8 from paddy soil. The strain was Gram-negative, had curved rods, and grew on crotonate. Sulfate was not used as an electron acceptor. Strain TB-6 was closely related to S. wolfei subsp. wolfei. The relation between strain TB-6 and the members of Syntrophomonas are discussed.

Bacteria, Anaerobic↗
PubMed2006

[Estimation of N loss loading by runoff from paddy field during submersed period in Hangjiahu area].

As the largest bread basket in Zhejiang Province, Hangjiahu area is facing more and more serious water pollution, while the N loss loading by runoff from the paddy field during its submersed period is the main cause of the pollution. Through field experiment and fixed spot observation, the model of precipitation - runoff in Yangtze delta was testified, and the results showed that the precipitation - runoff model from HE Baogen was basically accorded with the fact after considering the impact of field overflow mouth, and the error was between - 19. 9% and + 18. 0%. The model of N concentration with precipitation - runoff in paddy field during submersed period was brought forward, with the R value being 0. 948. These two models consisted of the model of N loss loading by runoff from paddy field during submersed period. Based on this model as well as the past 30 years data of fertilization and precipitation, 1: 250,000 topography map, land use map, and water system map, the N loss loading and its distribution were estimated by using GIS method, and the results showed that the N loss loading was different from place to place, with an average of 35.26 kg N x hm(-2), and accounting for 12. 69% of the applied N. The N loss loading in Anji and Yuhang with obviously more precipitation was higher than that in other places, while Haining also had a serious N loss problem because of the huge amount of applied N.

China↗
PubMed2004

[Effects of controlled release fertilizers on N2O emission from paddy field].

With close chamber method, this paper studied the effects of controlled release fertilizer (CRF), non-coated compound fertilizer (Com) and conventional urea (CK) on N2O emission from paddy field. The results showed that within 10 days after transplanting, the ammonium and nitrate concentrations in the surface water of the plot treated with CRF were significantly different from those treated with Com. The partial coefficient between N2O emission rates and corresponding nitrate concentrations in the water was significantly high (r = 0.6834). Compared with Com, CRF was able to reduce N2O emission from the paddy field. Within 100 days after basal application, the N2O emission rate of treatment CRF was only 13.45%-21.26% of Corn and 71.17%-112.47% of CK. The N2O emission of Com was mainly concentrated in 1-25 d after basal fertilization and mid-aeration period, but that of CRF was remarkably lower during same period, while the peak of N2O emission of CK was postponed and reduced. It was concluded that both one-time fertilization of CRF and several-time fertilizations of conventional urea were able to reduce N2O emission from the paddy field.

Air Pollutants↗
PubMed2003

[Soil fertility evolution, nutrient balance and reasonable fertilization in paddy field in southern area of Jiangsu Province].

With the integration of macro-statistical data, micro-survey data and parameters obtained from previous studies, the soil fertility evolution and nutrient balance in paddy fields in southern Jiangsu were analyzed to provide evidence of scientific fertilizer application. It was showed that from 1982 to 1996, the total nitrogen and organic matter contents in Wuxi paddy fields had a rapid increase, phosphorus had a slow increase, and potassium had a general decrease. Soil nutrient balance analysis in Wuxi and Changzhou cities showed that nitrogen was commonly surplus, potassium was generally inadequate, and phosphorus was different from nitrogen and potassium. Phosphorus was surplus in Wuxi city and inadequate in Changzhou city. On the basis of nutrient balance, the reasonable nitrogen, phosphorus and potassium fertilizer application amount was 488.9, 113.1 and 235.1 kg.hm-2 in Wuxi, and 499.4, 112.5 and 234.2 kg.hm-2 in Changzhou paddy fields, respectively. Due to the nitrogen accumulation and potassium absence in soil, the nitrogen and potassium application amount should be lower and higher than the above reasonable nitrogen and potassium application amount.

Fertilizers↗
PubMed2005

[Control effects of rice-duck farming and other weed management strategies on weed communities in paddy fields].

By the methods of community ecology, field studies were conducted to evaluate the control effects of three weed management strategies, i. e., rice-duck farming (RD), manual weeding (MW) and chemical weeding (CW), on the weed communities in paddy fields. The results showed that under rice-duck farming, the weed density in paddy fields decreased significantly, and the control effects on dominant weed species such as Monochoria vaginalis, Cyperus difformis, Sagittaria pygmaea were all above 95%, with an overall effect higher than CW and MW. Under RD, the species richness and Shannon-Wiener diversity indices decreased slightly, while Pielou community evenness indices increased markedly, indicating that the species composition of weed community was greatly improved, and the infestation of former dominant weed species was reduced. The structure of weed communities in paddy fields varied with different weed management strategies, e. g., under RD, Lindernia procumbens, Cyperus difformis and Fimbristylis miliacea constituted the major weed community, and the Whittaker index was significant higher than that of CW, MW and CK, which indicated that rice-duck farming had a greater effect on the structure of the weed communities. The same conclusion could be drawn from Sorensen's similarity indices and cluster analysis with Sorensen's index as the distance measurement.

Animals↗
PubMed2003

[Fate of fertilizer nitrogen in paddy field of black soil region].

Taking the N application rate, method and main varieties applied in paddy field of black soil in Northeast China as the parameters, a micro-plot tracer isotope trial and a normal urea plot trial were conducted for two years to study the fate of fertilizer nitrogen in paddy field. The results showed that 22.2%-46.1% of applied chemical fertilizer nitrogen was absorbed and remained in the paddy plant, and averaged 37.68%. About 12.7% to 25.4% of applied N during the same year was remained in the soil. The determined nitrogen losses rate through ammonia volatilization in a closed chamber system was 19.0%-44.2%. The use efficiency of chemical fertilizer N was influenced by the application method. Higher use efficiency would be obtained with deeper or mixing application method. The amount of nitrogen remained in soil were related to the application method, and the remained rate was increased with the amount and application depth increasing. The experiment with 15N showed that no 15N residue was detected below 80 cm in depth, which was because the heavy texture of the black soil. The results of the tracer isotope trial and the plot experiments showed that there was a rough balance between the amount of residual nitrogen in soil and the priming effect from chemical fertilizer nitrogen.

Fertilizers↗
PubMed2005

Biodiversity and seasonal variation of the cyanobacterial assemblage in a rice paddy field in Fujian, China.

Cyanobacteria are one of the main components of the microbiota in rice paddy fields and significantly contribute to its fertilization. The diversity and changes of the cyanobacterial assemblage were investigated during a rice growth season and after harvest in a paddy field located in Fujian Province, China. The cyanobacterial populations were analyzed by a semi-nested PCR, followed by denaturing gradient gel electrophoresis analysis. Twenty-four phylotypes were identified from the denaturing gradient gel electrophoresis profiles. The number of cyanobacterial phylotypes showed a seasonal variation and reached a peak in September, both in the upper (0-5 cm) and the deeper (10-15 cm) soil fractions. Some cyanobacterial sequences were only present during the rice growth season, while others were only found after harvest.

Biodiversity↗
PubMed2004

Phosphorus purification in a paddy field watershed using a circular irrigation system and the role of iron compounds.

In a paddy field watershed using a circular irrigation system, it was clear that the watershed tended to purify phosphorus by an analysis on the mass balance of pollutants. A reasonable hypothesis was that the phosphorus precipitation with iron compounds in a river may affect the purification. To verify this, an investigation on phosphorus and iron in the river water and sediments were conducted. Total iron (T-Fe) concentration in the river ranged from 3 to 10 mg/L, and the concentration increased with the river flowing down, whereas dissolved iron (D-Fe) concentrations tended to decrease. The concentrations of total phosphorus (T-P) and phosphate phosphorus (PO4-P) also tended to decrease as the river flowing down. From the analysis of mass balance, the study watershed was considered to be a substantial iron source, having 307 and 206 kg/ha of annual outflow loads. In the sediment of the river, T-P ranged from 834 to 2440 microg/g, and most of the inorganic compound was Fe-P. In addition, The Bray No.2 phosphorus (441-1030 microg/g) was much higher than in paddy soils. Therefore, the sediment contained a large amount of phosphorus and was fertile. From the results of laboratory-based experiments, it can be said that iron compounds in the river were sufficient for the precipitation of phosphorus. Since the accumulated sediment in the river was conventionally dredged up and transported to adjacent paddy fields, it was considered to be that this operation played a significant role in phosphorus resource recycling.

Agriculture↗
PubMed1994

Paddy field dermatitis in Assam: a cercarial dermatitis.

Rice field dermatitis is an occupational health problem in Assam. The afflicted paddy field workers develop exanthema on the exposed parts of their skin mainly legs and arms when they come in contact with water in rice fields. Itching sensations start after 30 minutes to 1 1/2 hours after initial exposure. After 6-12 hours there is intensely pruritic macular eruption and in a few cases secondary skin infection may also develop. The clinical course of the disease is suggestive of cercarial dermatitis. Numerous gastropod snails belonging to families Lymnaeidae, Bulinidae and Planorbidae were collected from paddy fields and were investigated for cercarial infection. It was found that planorbid snails were infected with animal schistosome cercariae. These cercariae were able to invade human skin and caused dermatitis in human volunteers after repeated exposure.

Agricultural Workers' Diseases↗
PubMed2003

Nitrogen removal from water containing high nitrate nitrogen in a paddy field (wetland).

Nowadays, it has become very common to find in Japan that nitrate nitrogen concentrations are very high in spring water and in well water where the land use of a watershed is agricultural. We have often observed around 50 mg/L of nitrate nitrogen in the spring water where we live. Crops produced in those fields are mainly vegetables such as celery, cabbage, lettuce, carrots, and so on. Green tea is also popular in Japan. In order to produce good quality green tea, farmers apply a great amount of nitrogen fertilizer. This amount can reach up to 1,000 kg/ha in some areas, although the average application amounts to 628 kg/ha in Japan. As a result, ground water that is rich in nitrate flows into the river, which results in a high nitrogen concentration in river water and ground water. Further, this causes a low pH in river water in some tributary rivers in Japan, though this kind of case is very rare. We knew from field tests that if water contained a high nitrogen concentration and was introduced into paddy fields, high nitrogen removal would be performed. This paper presents the outline and results of a system on how to remove nitrogen using paddy fields (wetlands). Further, this paper presents the evaluated results of the removal quantity at the watershed level.

Agriculture↗
PubMed2004

A study on pesticide runoff from paddy fields to a river in rural region--1: field survey of pesticide runoff in the Kozakura River, Japan.

Runoff characteristics of nine kinds of herbicides from paddy fields were surveyed in the Kozakura River, that is one of the tributaries flowing into the Lake of Kasumigaura, over a period of 23 April to 30 June (before and after rice transplantation) of year. The flow rates of river water and the concentrations of herbicides in the river water were measured every day in May and every 2 days in April and June at six survey sites along the river. The runoff characteristics of herbicides were elucidated by taking account of the rainfall data, the detailed application data (application date and quantities of herbicides applied to each paddy field in a region), and their physico-chemical properties. The runoff rates (the runoff/application amounts ratio) were calculated for each herbicide, resulting in the range of 8.2-22.4%. The runoff rates were correlated fairly well with octanol-water partition coefficient, logP(ow), rather than with water solubility of herbicides.

Agriculture↗
PubMed2006

Simulation of mefenacet concentrations in paddy fields by an improved PCPF-1 model.

An improved simulation model (PCPF-1) has been evaluated for the prediction of the fate of mefenacet in an experimental paddy field. This model simulates the fate and transport of pesticide in paddy water and the top 1 cm of paddy soil. Observed concentrations of mefenacet in the paddy water and the surface soil exponentially decreased from their maximum concentrations of 0.70 mg litre(-1) and 11.3 mg kg(-1), respectively. Predicted mefenacet concentrations both in the water and surface soil were in excellent agreement with those measured during the first 2 weeks after herbicide application, but concentrations in paddy water were appreciably overestimated thereafter. The model simulated mefenacet losses through runoff, percolation and degradation to be respectively 41.9%, 6.4% and 57.3% of applied, and the mass balance error was about -6%. The model simulation implied that drainage and seepage control, especially shortly after application when herbicide concentrations are high, is essential for preventing pesticide losses from paddy fields. In focusing on pesticide concentrations in this early period the PCPF-1 model can be a beneficial tool for risk assessment of pesticide losses and in the evaluation of agricultural management for reducing pesticide pollution associated with paddy rice production.

Acetanilides↗