SEARCH · Search PubMed
Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.
Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.
The synthesis of several new 5'-deoxy-5'-nucleosideacetic acid derivatives by the reactions of alkoxycarbonylmethylene triphenylphosphoranes with nucleoside 5'-aldehydes is described.
We have used observations of the rare isotopes of HCN and HNC to determine the relative abundance of these two chemical isomers along the central ridge of the Orion molecular cloud. The abundance ratio [HCN]/[HNC] decreases by more than an order of magnitude from the relatively warm plateau and hot core sources toward the KL nebula to the colder, more quiescent clouds to the north and south. Even in the cooler regions, however, the ratio is an order of magnitude larger than that found in previous investigations of cold dark clouds. We determine the kinetic temperature in the regions we have studied from new observations of methylacetylene (CH3CCH), together with other recent estimates of the gas temperature near KL. The results suggest that the warmer portions of the cloud are dominated by different chemical pathways than those in the general interstellar cloud material.
Laboratory measurements and calculations have been performed to determine the abundance ratio of the deuterated ethynyl radical (CCD) to the normal radical (CCH) which can be achieved in dense interstellar clouds via isotopic fractionation in the C2H2+ (HD) = C2HD+ (H2) system of reactions. According to this limited treatment, the CCD/CCH abundance ratio which can be attained is in the range 0.02-0.03 for the Orion molecular cloud and 0.01-0.02 for TMC-1. These ranges of numbers are in reasonable agreement with the observed values in Orion and TMC-1. However, the analysis of the CCD/CCH abundance ratio is complicated via the presence of competing fractionation mechanisms, especially in the low-temperature source TMC-1.
We present observations of the 1300 micron continuum emission and the C18O spectral-line emission from three well-studied giant molecular cloud cores: Orion, W49, and W51. The observations were obtained at the Five College Radio Astronomy Observatory, and they provide a means to examine the consistency of these two methods to trace the column density structure of molecular clouds. We find a good general correlation between the 1300 micron continuum, which traces the column density of dust, and the C18O J = 2 --> 1 line emission, which traces the column density of molecular gas, when the effects of source temperature are taken into consideration. Moreover, nominal values for the gas and dust abundances and the dust properties reproduce the observed continuum-to-line ratios. Thus, no strong C18O abundance gradients within sources has been found, and it appears that either the C18O emission lines or the submillimeter dust emission may be used to derive the mass column density within molecular clouds accurately.
The effect of radiogenic heating on the thermal evolution of spherical icy bodies with radii 1 km < R < 100 km was investigated. The radioisotopes considered were 26Al, 40K, 232Th, 235U, and 238U. Except for the 26Al abundance, which was varied, the other initial abundances were kept fixed, at values derived from those of chondritic meteorites and corresponding to a gas-to-dust ratio of 1. The initial models were homogeneous and isothermal (To = 10 K) amorphous ice spheres, in a circular orbit at 10(4) AU from the Sun. The main object of this study was to examine the conditions under which the transition temperature from amorphous into cubic ice (Ta = 137 K) would be reached. It was shown that the influence of the short-lived radionuclide 26Al dominates the effect of other radioactive species for bodies of radii up to approximately 50 km. Consequently, if we require comets to retain their ice in amorphous form, as suggested by observations, an upper limit of approximately 4 x 10(-9) is obtained for the initial 26Al abundance in comets, a factor of 100 lower than that of the inclusions in the Allende meteorite. A lower limit for the formation time of comets may thus be derived. The possibility of a coexistence of molten cometary cores and extended amorphous ice mantles is ruled out. Larger icy spheres (R > 100 km) reached Ta even in the absence of 26Al, due to the decay of the other radionuclides. As a result, a crystalline core formed whose relative size depended on the composition assumed. Thus the outermost icy satellites in the solar system, which might have been formed of ice in the amorphous state, have probably undergone crystallization and may have exhibited eruptive activity when the gas trapped in the amorphous ice was released (e.g., Miranda).
SiS has been conclusively detected toward Orion-KL via its J = 6-5 and J = 5-4 rotational transitions at 91 and 109 GHz. Line profiles indicate that the species is present at an LSR velocity of 7.5 km s-1 with a half-width at zero power of 36 km s-1. Such characteristics associate SiS with the moderate velocity outflow (V approximately 18 km s-1) centered on IRc2 and observed in thermal SiO, the NH3 "plateau," and OH, H2O, and SiO masers. The column density estimated for SiS in this region is Ntot = 4 x 10(15) cm-2, corresponding to a fractional abundance of f approximately 4 x 10(-9). Such an abundance implies an SiO/SiS ratio of approximately 60 in the outflow material, remarkably close to the cosmic O/S ratio of approximately 40 and contrasting with the SiO/SiS value of > approximately 10(3) predicted by ion-molecule models. This difference is probably a result of the high temperatures and densities present in the outflow, which favor thermal equilibrium abundances similar to those observed in the circumstellar shells of late-type stars rather than "ion-molecule"-type concentrations. In addition to SiS, some twenty new unidentified lines near 91 and 109 GHz were detected toward KL, as well as transitions arising from HC5N, HC13CCN, HCC13CN, O13CS, and, possibly, CH3CH2OH, CH3CHO, and CH3OD.
We have detected the 1(10)-1(01) transition of C3HD at 19.418 GHz at twelve positions in cold, dark clouds and resolved the D hyperfine components in two sources (L1498 and TMC-1C) well enough to derive values for the D quadrupole coupling constants. Simultaneous observations of C3H2 in each source yield relative integrated line intensities in the range 0.10-0.18, from which we derive relative [C3HD]/[C3H2] abundances in the range 0.05-0.15. These are among the highest deuteration ratios yet observed. Within the limits of the observational and modeling uncertainties it is possible to explain the derived [C3HD]/[C3H2] ratios by ion-molecule chemistry if [e-] approximately 3 x 10(-7).
A survey of well-known molecular clouds in the four strongest HCO NK-,K+ = 1(01)-0(00) hyperfine transitions has been carried out to determine the prevalence of HCO and to study its chemistry. HCO emission was observed in seven molecular clouds. Three of these, NGC 2264, W49, and NGC 7538, were not previously known sources of HCO. In addition, NGC 2024 and Sgr B2 were mapped and shown to have extensive HCO emission. The survey results show the HCO abundance to be enhanced in H II-molecular cloud interface regions and support a correlation between C+ and HCO emission. The strength of the HCO emission in NGC 2024 is interpreted in terms of this enhancement and the source structure and proximity to Earth.
A survey of the 4(04)-3(03) and 1(01)-0(00) transitions of HOCO+ has been made toward several molecular clouds. The HOCO+ molecule was not observed in any sources except Sgr B2 and Sgr A. The 5(05)-4(04) and 4(14)-3(13) transitions were also detected toward Sgr B2. The results indicate that gas phase CO2 is not a major carbon reservoir in typical molecular clouds. In Sgr B2, the HOCO+ antenna temperature exhibits a peak approximately 2' north of the Sgr B2 central position (Sgr B2[M]) and the 4(04)-3(03) line emission is extended over a approximately 10' x 10' region. The column density of HOCO+ at the northern peak in Sgr B2 is approximately 3 x 10(14) cm-2, and the fractional abundance relative to H2 > or = 3 x 10(-10), which is about 2 orders of magnitude greater than recent predictions of quiescent cloud ion-molecule chemistry.
In this paper we present nearly simultaneous 1300 microns continuum and J = 2-1 C18O maps of the cores of five molecular clouds, W3, NGC 2264, NGC 6334I, rho Oph, and S140. The purpose of this experiment was to compare these two column density tracers. We find that dust continuum and C18O emission are equally effective tracers of column density in molecular cloud cores and give a good indication of cloud structure. When the maps are analyzed in terms of the quantity q = Q/[a rho RX(C18O)], we find that q does not vary by much more than an order of magnitude either within objects or from object to object, implying that nominal dust parameters of absorption efficiency, radius, and gas-to-dust ratio and CO abundance are on average correct in a variety of sources. We did detect source-to-source variations in q. This variation could be either in the dust-to-CO number density ratio or in grain parameters. These variations are not well correlated with total source luminosity, average or typical temperature, or total column density. The best example of this variation appears to be rho Oph where q is about a factor of 7 lower than is typically found. Our approach is analogous to the study of the A nu to CO ratio and is probably equivalent to extending this study to large A nu if the same grains are responsible for both optical opacity and far-infrared to millimeter-wave emission. There is no fundamental reason to expect A nu/NCO or q to be constant and, in fact, we have found that it is not constant in even a small source sample.
We have obtained high-resolution spectra of the 153 micrometers J = 17-16 CO line in the BN-KL region of Orion using a laser heterodyne spectrometer. The line shows broad wings (30 km s-1 FWHM at BN) characteristic of the plateau emission as well as a narrower component probably associated with the quiescent gas in the molecular ridge. From an analysis of the plateau emission together with that observed in lower J CO transitions, we derive an excitation temperature of 180 +/- 50 K and minimum column density of 1 x 10(18) cm-2 for CO in this component, which constitutes 80% of the total integrated intensity of the J = 17-16 line near BN. The peak intensity of the narrower component observed at 0.8 km s-1 resolution increases relative to that of the plateau component toward theta 1C and away from BN, while the width decreases from 10 to 4 km s-1 (FWHM).
Several interstellar molecules have been detected toward the highly perturbed B and G clouds associated with the supernova remnant IC 443 via their 3 mm transitions, including N2H+, SiO, SO, CN, HNC, and H13CO+. The (J, K) = (1, 1) and (2, 2) inversion lines of metastable ammonia have also been observed, as well as the J = 3-2 transition of HCO+ at 1.2 mm. Analysis of the (1, 1) and (2, 2) inversion lines of NH3 indicates minimum gas kinetic temperatures of TK = 70 K toward cloud B, and TK = 33 K in cloud G. Modeling of the J = 1-0 and J = 3-2 transitions of HCO+ implies densities greater than 10(5) cm-3 toward both positions. These data clearly show that hot and dense material is present in IC 443, and they suggest the presence of shocks in both regions. A careful analysis of the HCO+ lines indicates that the HCO+ abundance is at most enhanced by factors of a few over that found in cold, quiescent gas. This conclusion contradicts past claims of HCO+ abundance enhancements of several orders of magnitude in the perturbed regions. The N2H+ abundance was also found to be similar to that in cold gas, suggesting that there is no increase in ionization in the clouds. The abundances of SO and CS, as well as CN and NH3, do not appear to differ significantly from those found in cold dark clouds, although chemistry models predict sulfur-containing species to undergo high-temperature enhancements. SiO, however, is found to have an abundance in the perturbed gas 100 times larger than the upper limits observed in the dark cloud TMC 1, a result in agreement with high temperature chemistry models. In addition, the HNC/HCN ratio in both IC 443 B and G was found to be approximately 0.1--far from the ratio of 1 predicted by low-temperature ion-molecule chemistry, but similar to the values observed in clouds where elevated temperatures are present.
Observations of nine oxygen- and sulfur-containing organic molecules have been made toward the cold dark clouds TMC-1 and L134N. We have confirmed the presence of para-ketene (H2C2O) in TMC-1, have for the first time observed ortho-ketene, and find a total ketene column density approximately 1 x 10(13) cm-2. Thioformaldehyde (H2CS) is easily detectable in both TMC-1 and L134N, with a column density about 5 times larger in the former source (approximately 3 x 10(13) cm-2). The fractional abundance of ketene is comparable to the predictions of ion-molecule chemistry, while that of thioformaldehyde in TMC-1 is one to two orders of magnitude greater than that expected from such models at steady state. Interstellar sulfur chemistry thus continues to be poorly understood. We set upper limits for the column densities of formic acid (HCOOH), vinyl alcohol (CH2CHOH), methyl formate (HCO2CH3), formamide (NH2CHO), methyl mercaptan (CH3SH), isothiocyanic acid (HNCS), and thioketene (H2C2S) in both sources.
The J = 2-1 transition of SiO has been searched for toward both hot and cold molecular gas. SiO was not detected toward the dark clouds TMC-1, L134 N, and B335, down to column density upper limits of N < 2-4 x 10(10) cm-2. The species, however, has been observed toward all sources with a kinetic temperature greater than or equal to 30 K, with the largest column densities (N approximately 10(13)-10(17) cm-2) measured in the warmest (TK > or = 100 K) material. The abundance of SiO, relative to HCN, is found to be approximately 0.1-1 in the massive star-forming regions toward Orion and NGC 7538; toward the dark clouds, the upper limits to this ratio is less than 0.0002-0.004. A similar enhancement in the warmer regions is reflected in the SiO/H2 ratio as well. A linear relation was found between the natural log of the SiO concentration and 1/TK, suggesting that the species' formation involves a chemically specific process that contains an activation barrier of approximately 90 K. SiO was also found to be underabundant with respect to SO in cold clouds, with SiO/SO < 1/1000, versus SiO/SO > or =, measured in Orion-KL. The formation of SiO is therefore linked closely to the local gas kinetic temperature, rather than the oxygen abundance, and its synthesis is likely to involve high-temperature gas-phase reactions. The species thus may serve as an unambiguous indicator of high-temperature or "shock" chemistry.
We report a search for the acetylene (C2H2) nu 3 infrared vibration-rotation absorption near 3 micrometers toward the Becklin-Neugebauer source in the Orion molecular cloud. The relative abundance of C2H2/CO in the quiescent gas (9 km s-1 component) is less than 3 x 10(-3) (5 sigma).
We have observed the 2P3/2-2P1/2 fine-structure line of C II at 1900 GHz in five sources with ionization fronts nearly perpendicular to the plane of the sky. The LSR velocity of the C II emission is generally in good agreement with that observed for molecular species such as CO. However, the observed line widths of 3-14 km s-1 are typically wider than those of molecular lines and often show rapid spatial variations in the regions observed. In some sources this may indicate that part of the C II emanates from an ionized gas component, while for others it suggests an association between C II emission and an outflow. The C II brightness temperatures are typically equal to or slighty higher than the dust temperature at all locations observed. In the optically thin approximation, C II excitation temperatures are > or = 100 K and column densities are < or = 10(18) cm-2 for all sources except M17, which has a more intense and complicated line profile with a larger spatial extent than any other source observed. The quoted column density estimates derived in the optically thin limit appear to be somewhat lower than those predicted by models of photodissociation regions for sources with a side-illuminated geometry, but uncertainties in the UV flux and geometry of the ionization front preclude a definitive comparison. The estimated column densities would be higher if the C II emission were somewhat optically thick, in which case the ionized carbon would be more in equilibrium with the dust at temperatures lower than predicted by current models.
We study the effect of radiogenic heating due to 26Al on the thermal evolution of small icy satellites. Our object is to find the extent of internal melting as a function of the satellite radius and of the initial 26Al abundance. The implicit assumption, based on observations of young stars, is that planet and satellite accretion occurred on a time scale of approximately 10(6) yr (comparable with the lifetime of 26Al). The icy satellites are modeled as spheres of initially amorphous ice, with chondritic abundances of 40K, 232Th, 235U, 238U, corresponding to an ice/dust mass ratio of 1. Evolutionary calculations are carried out, spanning 4.5 x 10(9) yr, for different combinations of the two free parameters. Heat transfer by subsolidus convection is neglected for these small satellites. Our main conclusion is that the initial 26Al abundance capable of melting icy bodies of satellite size to a significant extent is more than 10 times lower than that prevailing in the interstellar medium (or that inferred from the Ca-Al rich inclusions of the Allende meteorite, approximately 7 x 10(-7) by mass). We find, for example, that an initial 26Al mass fraction of approximately 4 x 10(-8) is sufficient for melting almost completely icy spheres with radii of 800 km, typical of the larger icy planetary satellites. We also find that for any given 26Al abundance, there is a narrow range of radii below which only marginal melting occurs and above which most of the ice melts (and refreezes later). Since extensive melting may have important consequences, such as differentiation, gas release, and volcanic activity, the effect of 26Al should be included in future studies of satellite interiors.
We have made an observational study of the newly identified cyanomethane radical CH2CN and the possibly related species CH3CN with the goals of (1) elucidating the possible role of reactions of the type CnHm(+) + N in astrochemistry, and (2) providing a possible test of Bates's models of dissociative electron recombination. We find a remarkably different abundance ratio CH2CN/CH3CN in TMC-1 and Sgr B2, which we deduce is a result of the large difference in temperature of these objects. Studies of CH2CN and CH3CN in other sources, including two new detections of CH2CN, support this conclusion and are consistent with a monotonic increase in the CH2CN/CH3CN ratio with decreasing temperature over the range 10-120 K. This behavior may be explained by the destruction of CH2CN by reaction with O. If this reaction does not proceed, then CH2CN and CH3CN are concluded to form via different chemical pathways. Thus, they do not provide a test of Bates's conjectures (they do not both form from CH3CNH+). CH2CN is then likely to form via C2H4(+) + N --> CH2CNH+, thus demonstrating the viability of this important reaction in astrochemistry. The T dependence of the CH2CN/CH3CN ratio would then reflect the increasing rate of the C2H4(+) + N reaction with decreasing temperature.