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PubMed2005

Nutrient status and plant growth effects of forest soils in the Basin of Mexico.

The nutrient status of forest soils in the Mexico City Air Basin was evaluated by observing plant growth responses to fertilization with N, P or both nutrients combined. P deficiency was the most frequent condition for soil from two high pollution sites and N deficiency was greatest at a low N deposition site. Concentrations of Pb and Ni, and to a lesser extent Zn and Co, were higher at the high pollution sites. However, positive plant growth responses to P and sometimes to N, and results of wheat root elongation bioassays, suggest that heavy metal concentrations were not directly phytotoxic. Further studies are needed to determine if heavy metal toxicity to mycorrhizal symbionts of eucalyptus (Eucalyptus camaldulensis Dehnh.) from high pollution sites may explain the P deficiency and stunted growth. P deficiency is expected to limit the capacity for biotic N retention in N saturated forested watersheds in the Basin of Mexico dominated by Andisols.

Cobalt↗

PubMed2004

An approach for estimating soil carbon using the National Nutrient Loss Database.

Agricultural lands have the potential to contribute to greenhouse gas mitigation by sequestering organic carbon within the soil. Credible and consistent estimates will be necessary to design programs and policies to encourage management practices that increase carbon sequestration. Because a nationwide survey of soil carbon by the wide range of natural resources and management conditions of the United States is prohibitively expensive, a simulation modeling approach must be used. The National Nutrient Loss Database (NNLD) is a modeling and database system designed and built jointly by the USDA- Natural Resources Conservation Service (NRCS) and Texas A&M University to provide science-based inferences on environmental impacts from changes in agricultural management practices and programs at the regional and national level. Currently, the NNLD simulates 16 crops and covers approximately 1.35 x 10(8) ha. For estimating soil carbon sequestration, the database will be populated with approximately 1.5 x 10(6) field-level model runs using the EPIC (Environmental Policy Impact Calculator) model, which includes newly incorporated carbon equations consistent with those in the Century model. Each run will represent a unique situation defined by state, crop, climate, soil, irrigation type, conservation practice, tillage system, and nutrient management treatment (nutrient rate, application frequency, application timing, and manure category). Results are to be assigned to specific National Resource Inventory points (NRI) to simulate regional and national baselines. In this article we present the modeling approach and discuss the strengths and limitations.

Agriculture↗

PubMedDate not supplied

Land application of domestic effluent onto four soil types: plant uptake and nutrient leaching.

Land application has become a widely applied method for treating wastewater. However, it is not always clear which soil-plant systems should be used, or why. The objectives of our study were to determine if four contrasting soils, from which the pasture is regularly cut and removed, varied in their ability to assimilate nutrients from secondary-treated domestic effluent under high hydraulic loadings, in comparison with unirrigated, fertilized pasture. Grassed intact soil cores (500 mm in diameter by 700 mm in depth) were irrigated (50 mm wk(-1)) with secondary-treated domestic effluent for two years. Soils included a well-drained Allophanic Soil (Typic Hapludand), a poorly drained Gley Soil (Typic Endoaquept), a well-drained Pumice Soil formed from rhyolitic tephra (Typic Udivitrand), and a well-drained Recent Soil formed in a sand dune (Typic Udipsamment). Effluent-irrigated soils received between 746 and 815 kg N ha(-1) and 283 and 331 kg P ha(-1) over two years of irrigation, and unirrigated treatments received 200 kg N ha(-1) and 100 kg P ha(-1) of dissolved inorganic fertilizer over the same period. Applying effluent significantly increased plant uptake of N and P from all soil types. For the effluent-irrigated soils plant N uptake ranged from 186 to 437 kg N ha(-1) yr(-1), while plant P uptake ranged from 40 to 88 kg P ha(-1) yr(-1) for the effluent-irrigated soils. Applying effluent significantly increased N leaching losses from Gley and Recent Soils, and after two years ranged from 17 to 184 kg N ha(-1) depending on soil type. Effluent irrigation only increased P leaching from the Gley Soil. All P leaching losses were less than 49 kg P ha(-1) after two years. The N and P leached from effluent treatments were mainly in organic form (69-87% organic N and 35-65% unreactive P). Greater N and P leaching losses from the irrigated Gley Soil were attributed to preferential flow that reduced contact between the effluent and the soil matrix. Increased N leaching from the Recent Soil was the result of increased leaching of native soil organic N due to the higher hydraulic loading from the effluent irrigation.

Agriculture↗

PubMed1999

Rhizosphere feedbacks in elevated CO(2).

Understanding rhizosphere processes in relation to increasing atmospheric CO(2) concentrations is important for predicting the response of forest ecosystems to environmental changes, because rhizosphere processes are intimately linked with nutrient cycling and soil organic matter decomposition, both of which feedback to tree growth and soil carbon storage. Plants grown in elevated CO(2) substantially increase C input to the rhizosphere. Although it is known that elevated CO(2) enhances rhizosphere respiration more than it enhances root biomass, the fate and function of this extra carbon input to the rhizosphere in response to elevated CO(2) are not clear. Depending on specific plant and soil conditions, the increased carbon input to the rhizosphere can result in an increase, a decrease, or no effect on soil organic matter decomposition and nutrient mineralization. Three mechanisms may account for these inconsistent results: (1) the "preferential substrate utilization" hypothesis; (2) the "priming effect" hypothesis; and (3) the "competition" hypothesis, i.e., competition for mineral nutrients between plants and soil microorganisms. A microbial growth model is developed that quantitatively links the increased rhizosphere input in response to elevated CO(2) with soil organic matter decomposition. The model incorporates the three proposed mechanisms, and simulates the complexity of the rhizosphere processes. The model also illustrates mechanistically the interactions among nitrogen availability, substrate quality, and microbial dynamics when the system is exposed to elevated CO(2).

Journal Article↗

PubMed2005

Basidiomycete mycelia in forest soils: dimensions, dynamics and roles in nutrient distribution.

Basidiomycete mycelia are ubiquitous in forest soils where they fulfil a range of key ecological functions. Population studies, based largely on basidiome collections, indicate that mycelia of many ectomycorrhizal and saprotrophic basidiomycetes can spread vegetatively for considerable distances through soil, but the extent to which these become physically or physiologically fragmented is unclear. This review considers aspects of the distribution, dynamics and translocatory activities of individual basidiomycete mycelia in forest soil, highlighting current gaps in our understanding and possible ways to address these.

Basidiomycota↗

PubMed2000

Evolution of mycorrhiza systems.

Most terrestrial plants live in mutualistic symbiosis with root-infecting mycorrhizal fungi. Fossil records and molecular clock dating suggest that all extant land plants have arisen from an ancestral arbuscular mycorrhizal condition. Arbuscular mycorrhizas evolved concurrently with the first colonisation of land by plants some 450-500 million years ago and persist in most extant plant taxa. Ectomycorrhizas (about 200 million years ago) and ericoid mycorrhizas (about 100 million years ago) evolved subsequently as the organic matter content of some ancient soils increased and sclerophyllous vegetation arose as a response to nutrient-poor soils respectively. Mycorrhizal associations appear to be the result of relatively diffuse coevolutionary processes. While early events in the evolution of mycorrhizal symbioses may have involved reciprocal genetic changes in ancestral plants and free-living fungi, available evidence points largely to ongoing parallel evolution of the partners in response to environmental change.

Biological Evolution↗

PubMed2000

Effect of Herbivory and Plant Species Replacement on Primary Production.

Grazing optimization occurs when herbivory increases primary production at low grazing intensities. In the case of simple plant-herbivore interactions, such an effect can result from recycling of a limiting nutrient. However, in more complex cases, herbivory can also lead to species replacement in plant communities, which in turn alters how primary production is affected by herbivory. Here we explore this issue using a model of a limiting nutrient cycle in an ecosystem with two plant species. We show that two major plant traits determine primary production at equilibrium: plant recycling efficiency (i.e., the fraction of the plant nutrient stock that stays within the ecosystem until it is returned to the nutrient pool in mineral form) and plant ability to deplete the soil mineral nutrient pool through consumption of this resource. In cases where sufficient time has occurred, grazing optimization requires that herbivory improve nutrient conservation in the system sufficiently. This condition sets a minimum threshold for herbivore nutrient recycling efficiency, the fraction of nutrient consumed by herbivores that is recycled within the ecosystem to the mineral nutrient pool. This threshold changes with plant community composition and herbivore preference and is, therefore, strongly affected by plant species replacement. The quantitative effects of these processes on grazing optimization are determined by both the recycling efficiencies and depletion abilities of the plant species. However, grazing optimization remains qualitatively possible even with plant species replacement.

boreal forests↗

PubMed2001

Livestock wastewater treatment by a mangrove pot-cultivation system and the effect of salinity on the nutrient removal efficiency.

The present investigation compared the capacity of greenhouse pot-cultivation systems under two salinity conditions (freshwater and saline water) with two mangrove species (Bruguiera gymnorrhiza and Kandelia candel) to remove nutrients from livestock wastewater. During the whole treatment period there were relatively stable leachate TOC concentrations for wastewater-treated pots. Leachate NH4(+)-N concentration of B. gymnorrhiza pots was generally lower than that of K. candel pots. Leachate PO4(3-)-P concentration of pots receiving wastewater under freshwater condition was higher than that under saline water condition. Soil inorganic N content was more than two times higher for the wastewater treatments than that for the controls under low salinity condition and slower rate of increase under saline water condition. Soil P nutrients of both total and extractable inorganic forms significantly increased for both systems due to the discharges of livestock wastewater under both salinity conditions. The rate of increase in P contents for plants receiving livestock wastewater was 1-4 times that of the controls, much more than that in N contents (0.04-1.30 times). N nutrient removal efficiencies were 84.3% (65.6% by soil and 18.7% by plant) and 95.5% (32.2% by soil and 63.4% by plant), respectively by Kandelia candel and B. gymnorrhiza pot-cultivation systems under freshwater condition. Under saline water condition, N nutrient removal efficiencies by K. candel and B. gymnorrhiza pot-cultivation systems were 92.7% (80.7% by soil and 12.0% by plant) and 98.0% (67.6% by soil and 30.3% by plant), respectively. P nutrient removal efficiencies by K. candel and B. gymnorrhiza systems under freshwater condition were 79.2% (76.6% by soil and 2.6% by plant) and 91.8% (88.2% by soil and 3.6% by plant), respectively. The corresponding values were 88.0% (84.2% by soil and 3.8% by plant) and 97.8% (95.9% by soil and 1.9% by plant) under saline water condition.

Agriculture↗

PubMed2004

Carbon, nitrogen and phosphorus mineralization in two soils amended with distillery yeast.

The possibility of using yeast from alcohol distilleries as a source of nutrients in soil was investigated. The following treatments were used: no fertilization (control), 0.5% (w/w) yeast, 1% (w/w) yeast, and NPK. The decomposition of yeast was monitored for 90 days in two soils. The CO2 production and the microbial biomass were increased by an average of 1- to 3-fold by yeast incorporation compared to control. Protease activity also was enhanced 3- to 8-fold in the soils supplemented with yeast compared to control. The phosphatase activities were higher than control only during the first days. While nitrate contents increased in all treatments compared to control, available P only increased in the soils amended with 1% yeast or NPK by 45-119% and 309-489%, respectively. These results indicate that there exists an excellent potential for the use of yeast in the soil as a source of nitrate and available P for plant nutrition.

Analysis of Variance↗

PubMed2005

Hydrolytic enzyme activities of extracted humic substances during the vermicomposting of a lignocellulosic olive waste.

Humic substances and three hydrolytic enzymes (beta-glucosidase, phosphatase and urease) were extracted by neutral sodium pyrophosphate from an olive waste (dry olive cake), alone or mixed with municipal biosolids, during a nine month vermicomposting process. Easily degradable compounds decreased during the vermicomposting process because of microbial consumption. When municipal biosolids were added to dry olive cake, microbial activity increased and the amounts of compounds extracted by pyrophosphate were three times lower than olive cake alone. In both instances, beta-glucosidase, phosphatase and urease activities of the organic extracts either increased or remained the same after a nine month period of vermicomposting, thus suggesting that the humus enzyme complexes resisted microbial and earthworm attack. It is known that humus immobilised enzymes also remain active in soil environments, reactivating the nutrient cycles in soil. The use as amendments of vermicomposted olive cake, alone or when mixed with biosolids, could be a good alternative to reactivate the C, P and N-cycles in degraded soils for regeneration purposes.

Cellulose↗

PubMed2002

Comparison of the effect of surface application and subsurface incorporation of enhanced treated biosolids on the leaching of heavy metals and nutrients through sand and sandy loam soils.

Use of enhanced treated biosolids such as composted and dried, mesophilic anaerobically digested, dewatered (MADD) biosolids is becoming more popular. This is mainly in response to concerns over the potential for pathogens to enter the food chain. There is, therefore, a need to investigate how enhanced treatment, and methods by which these biosolids are applied, affects the leaching potential of metal and nutrients to ensure that water quality is not compromised. MADD cake (fresh, dried and composted) and MAD liquid sludge were applied by surface application and subsurface incorporation to sand (typic quartzipsamments, %OM = 3.0, pH = 6.5), sandy loam (typic hapludalf, %OM = 4.8, pH = 7.6) and silversand 'repacked semi-structured cores' (0.2 m by 0.1 m diameter) at rates equivalent to 250 kg N ha(-1) yr(-1). Leaching of Zn, Cu, Pb, Ni, N and P was investigated following application of five 8 h simulated rainfall events (4.9 mm h(-1)) in the laboratory. Little difference was observed between leaching of metals and nutrients from soils amended with enhanced treated biosolids (dried and composted MADD cakes) compared with conventional biosolids (fresh MADD cake and MAD liquid). Subsurface incorporation increased the risk of P and metal leaching compared with surface application. Nitrate losses were independent of application method. Similar nutrient losses from control and amended cores indicated that the leaching was derived predominantly from the soil clay and organic matter complexes. Evidence for attenuation of biosolids-derived metals and P by soil-derived clay and/or organic matter was found. Water balance data showed that hydrological regimes of each core were comparable and unlikely to account for observed differences in leaching losses.

Hydrogen-Ion Concentration↗

PubMed2004

Fate of Listeria monocytogenes in bovine manure-amended soil.

The survival and growth of Listeria monocytogenes in soil amended with bovine manure was studied under different environmental conditions of temperature, nutrients, and soil microflora. Autoclaved soil was compared with unautoclaved soil for assessing the influence of competitive soil microflora on the survival of L. monocytogenes. Initial L. monocytogenes cell numbers of 5 to 6 log CFU/g survived for up to 43, 43, and 14 days in manure-amended autoclaved soil at 5, 15, and 21 degrees C, respectively. In manure-amended unautoclaved soil, the pathogen was detectable for up to 43, 21, and 21 days at 5, 15, and 21 degrees C, respectively. L. monocytogenes was inactivated more rapidly in autoclaved soil amended with manure at a manure/soil ratio of 1:10 than in the more dilute (1:100) manure in soil samples at both 15 and 21 degrees C. However, in manure-amended unautoclaved soil, L. monocytogenes survived longer in samples with ratios of 1:10 than in the more dilute (1:100) manure-amended soil. The persistence of L. monocytogenes for several weeks in manure-amended soil suggests listeriae could be transmitted through soil to fresh produce or to shoes, clothing, and hands of field workers, especially during the cold months.

Antibiosis↗

PubMed2001

[Runoff loss ways of nutrients in non-irrigated farmland in Hefei outskirts].

Taking non-irrigated flatlands in Hefei outskirts as experiment observation areas, yellow brown soil as selected soil type, and < 3 degrees as ground slope, the time of runoff development, runoff quantities, and silt carrying capacity under different rainfall intensity were observed on the non-irrigated farmlands with different kinds of crops such as grain, oil, cotton and vegetables, and with different coverage for continuous 3 years. Based on the observation, water and soil samples were collected and analyzed. The results showed that the loss way of the surface soil and nutrients in non-irrigated flatlands was obviously different from that on the sloping fields and on the upland. Over 98% of available N, P, and K nutrient loss were run off by chemical erosion. Physical erosion was the main way of the surface soil and organic matter loss, and 96.14% of total organic loss was caused by physical erosion.

Ecology↗

PubMedDate not supplied

Decadal change in vegetation and soil phosphorus pattern across the Everglades landscape.

Wetlands respond to nutrient enrichment with characteristic increases in soil nutrients and shifts in plant community composition. These responses to eutrophication tend to be more rapid and longer lasting in oligotrophic systems. In this study, we documented changes associated with water quality from 1989 to 1999 in oligotrophic Everglades wetlands. We accomplished this by resampling soils and macrophytes along four transects in 1999 that were originally sampled in 1989. In addition to documenting soil phosphorus (P) levels and decadal changes in plant species composition at the same sites, we report macrophyte tissue nutrient and biomass data from 1999 for future temporal comparisons. Water quality improved throughout much of the Everglades in the 1990s. In spite of this improvement, though, we found that water quality impacts worsened during this time in areas of the northern Everglades (western Loxahatchee National Wildlife Refuge [NWR] and Water Conservation Area [WCA] 2A). Zones of high soil P (exceeding 700 mg P kg(-1) dry wt. soil) increased to more than 1 km from the western margin canal into the Loxahatchee NWR and more than 4 km from northern boundary canal into WCA-2A. This doubling of the high soil P zones since 1989 was paralleled with an expansion of cattail (Typha spp.)-dominated marsh in both regions. Macrophyte species richness declined in both areas from 1989 to 1999 (27% in the Loxahatchee NWR and 33% in WCA-2A). In contrast, areas well south of the Everglades Agricultural Area, induding WCA-3A and Everglades National Park (ENP), did not decline during this time. We found no significant decadal change in plant community patterns from 1989 and 1999 along transects in southern WCA-3A or Shark River Slough (ENP). Our 1999 sampling also included a new transect in Taylor Slough (ENP), which will allow change analysis here in the future. Regular sampling of these transects, to verify decadal-scale environmental impacts or improvements, will continue to be an important tool for long-term management and restoration of the Everglades.

Agriculture↗

PubMed1990

Mathematical Model of Plasmid Transfer between Strains of Streptomycetes in Soil Microcosms.

A mathematical model was developed and used to simulate the long-term dynamics of growth and plasmid transfer in nutrient-limited soil microcosms of Streptomyces lividans TK24 carrying chromosomal resistance to streptomycin, S. lividans 1326; and S. violaceolatus ISP5438. Donor, recipient, and transconjugant survival was modelled by an extension to the Verhulst logistic equation which takes account of nutrient limitation, and plasmid transfer was modelled by a mass action model. Rate parameters were derived from experimental data on the early stages of the development of sterile systems. The model predicted donor, recipient, and transconjugant populations in 2.4-h (0.1-day) steps and was tested against the long-term behavior of the experimental sterile systems and independent experimental data on nonsterile systems. Bacteria were periodically enumerated onto selective media over a 20-day period. The effects of long-term nutrient-moisture depletion were correctly predicted.

Journal Article↗

PubMed2005

Utilization of composted sugar industry waste (pressmud) to improve properties of sodic soil for rice cultivation.

Sulphitation pressmud (SPM) and its composts were prepared by heap, pit, NADEP and vermicomposting methods and their effects were compared with soil properties and growth, yield and nutrient uptake by rice in a sodic soil under pot conditions. Application of 15 t ha(-1) SPM and its different composts significantly increased the plant height and dry matter accumulation at different intervals, grain and straw yields and N, P and K uptake by the crop over the control. NADEP compost of SPM alone recorded the maximum and significant plant height by 8.5 to 19.3% and plant dry matter by 14.6 to 32.8% over the raw SPM at different intervals. NADEP composts of SPM alone and SPM + rice straw were also found to be superior than raw SPM by recording 34.8 and 27.8% more grain yield respectively. The SPM composts prepared by NADEP and SPM by vermicomposting methods significantly accumulated higher N and K in rice grains and straw, while NADEP compost of SPM and SPM + rice straw recorded more P in grains and straw than raw SPM. Application of SPM and its composts reduced the pH, EC and bulk density of the soil after rice harvesting, though the reductions were not significant in comparison to the control. However, these treatments increased the soil organic C by 33.33 to 69.0%, available N by 41.4 to 74.8%, available P by 47.1 to 97.8%, available K by 11.8 to 59.2% and available S by 10.3 to 90.7% over the control. NADEP composts, in general, were found to be superior than the raw SPM and other composts in residual soil nutrient content after rice crop.

Agriculture↗

PubMed2005

Soil microbial community response to land use change in an agricultural landscape of western Kenya.

Tropical agroecosystems are subject to degradation processes such as losses in soil carbon, nutrient depletion, and reduced water holding capacity that occur rapidly resulting in a reduction in soil fertility that can be difficult to reverse. In this research, a polyphasic methodology has been used to investigate changes in microbial community structure and function in a series of tropical soils in western Kenya. These soils have different land usage with both wooded and agricultural soils at Kakamega and Ochinga, whereas at Ochinga, Leuro, Teso, and Ugunja a replicated field experiment compared traditional continuous maize cropping against an improved N-fixing fallow system. For all sites, principal component analysis of 16S rRNA gene denaturing gradient gel electrophoresis (DGGE) profiles revealed that soil type was the key determinant of total bacterial community structure, with secondary variation found between wooded and agricultural soils. Similarly, phospholipid fatty acid (PLFA) analysis also separated wooded from agricultural soils, primarily on the basis of higher abundance of monounsaturated fatty acids, anteiso- and iso-branched fatty acids, and methyl-branched fatty acids in the wooded soils. At Kakamega and Ochinga wooded soils had between five 5 and 10-fold higher levels of soil carbon and microbial biomass carbon than agricultural soils from the same location, whereas total enzyme activities were also lower in the agricultural sites. Soils with woody vegetation had a lower percentage of phosphatase activity and higher cellulase and chitinase activities than the agricultural soils. BIOLOG analysis showed woodland soils to have the greatest substrate diversity. Throughout the study the two functional indicators (enzyme activity and BIOLOG), however, showed lower specificity with respect to soil type and land usage than did the compositional indicators (DGGE and PLFA). In the field experiment comparing two types of maize cropping, both the maize yields and total microbial biomass were found to increase with the fallow system. Moreover, 16S rRNA gene and PLFA analyses revealed shifts in the total microbial community in response to the different management regimes, indicating that deliberate management of soils can have considerable impact on microbial community structure and function in tropical soils.

Agriculture↗

PubMed1997

Induced Natural Transformation of Acinetobacter calcoaceticus in Soil Microcosms.

Factors affecting natural transformation of Acinetobacter calcoaceticus BD413 with homologous chromosomal DNA in a silt loam soil microcosm were investigated. Inducible transformation of declining populations of noncompetent A. calcoaceticus cells was detectable for up to 6 days when a simple carbon source, salts, and freshly added DNA were used. In two different experimental setups, the residence time in soil of induced cells could be increased to either 11 or 24 h before DNA addition without reduced transformation frequency; 200-to 1,000-fold fewer transformants were observed following the addition of water. These observations suggest that A. calcoaceticus remains transformable for several hours after its activation by nutrients in soil. Increasing the levels of phosphate salts significantly enhanced the numbers of transformants without increasing the recipient counts correspondingly. Variable levels of ammonium or divalent cations (Mg(sup2+) and Ca(sup2+)) did not have a similar major influence. Soil moisture content significantly affected the transformation frequency of A. calcoaceticus cells, with a general tendency of higher frequencies in drier soil. A minimal frequency was observed at around 35% soil moisture. The data indicate that A. calcoaceticus cells in soil which cannot be detectably transformed are easily induced by nutrients to undergo natural transformation with chromosomal DNA. Access to nutrients seems to be critical for the development and maintenance of competence in soil, which is also affected by abiotic factors like moisture level and phosphate salt concentration.

Journal Article↗