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PubMed2001

Direct and maternal genetic effects on birth and weaning traits in multibreed cattle data and predicted performance of breed crosses.

Direct and maternal additive effects and heterosis were estimated using data from straightbred Angus, Brahman, Charolais, Hereford, and four generations of rotational crosses among these breeds. Traits of interest were birth weight, Julian day of birth, average daily gain from birth to weaning, 205-d weight, and weaning weight per cow exposed. Complete data were available on 3,445 calves produced from 4,733 matings. Discrete generations of 4-yr duration were produced from 1970 through 1988. Brahman was included in each rotational crossbreeding system. Genetic effects were estimated by regression. Direct and maternal additive effects of Brahman, Charolais, and Hereford were estimated as deviations from Angus. Direct and maternal heterosis effects were assumed proportional to expected heterozygosity. The Brahman direct additive effect resulted in later-born calves (P < 0.01). Brahman, Charolais, and Hereford direct additive effects increased birth weight, and the Brahman maternal additive effect decreased birth weight compared with Angus (P < 0.05). Charolais direct and maternal additive effects were greater than Angus for average daily gain and 205-d weight (P < 0.01). The Hereford maternal additive effects on average daily gain and 205-d weight were less than those of the other breeds (P < 0.01). Breed combinations including Brahman had greater direct heterosis for birth weight, average daily gain, and 205-d weight than other combinations (P < 0.01). Angus, Charolais, and Hereford direct additive effects on weaning weight per cow exposed were greater than Brahman (P < 0.05). Predicted average daily gain, 205-d weight, and weaning weight per cow exposed were, on average, greater in four-breed rotation systems than in three- and two-breed systems. Among two-breed rotation systems, predicted average daily gain and 205-d weaning weight were greatest for Charolais-Brahman and least for Angus-Hereford. Calves from the Angus-Charolais-Hereford system weighed less at weaning than any other three-breed combination. However, weaning weight per cow exposed from the Angus-Charolais-Hereford system was greatest among three-breed systems. Within three- and four-breed rotation systems, ranges in predicted birth and weaning weights among generations varied by up to 10.0 and 25.2 kg, respectively. The choice of breeds affects performance, and the sequence of their use may affect intergenerational variation in performance.

Animals↗

PubMed1982

Scrotal measurements in beef bulls: heritability estimates, breed and test station effects.

Heritability estimates for scrotal circumference and testicular tone at weaning (225 d) and yearling (365 d) were determined from records on 565 bulls from a purebred Angus herd; year, station and breed effects were determined from scrotal circumference records on 2,420 bulls at five tests stations. Year, breed and breed X year effects on scrotal circumference, length, width and volume were determined from records on 347 bulls at one station. Heritability estimates (+/- SE) were .60 +/- .17, .28 +/- .18 and .25 +/- .18 for weaning scrotal circumference, right and left tone, and .38 +2- .16, .72 +/- .18 and .52 +/- .17 for yearling scrotal circumference, right and left tone, respectively. With the exception of low negative correlations of 205-d weight and longissimus muscle area with yearling scrotal circumference (-01 and -.02, respectively), correlations of growth and live-estimated carcass traits with weaning or yearling scrotal dimensions were low and positive (0.8 to .35). In the second data set, Simmental and Angus had greater (p less than .01) yearling scrotal circumferences than Charolais or Herefords; means were 35.3, 35.0, 33.7 and 33.5 cm, respectively. Station and station x breed effects were significant (P less than .01), with the latter effect indicating that breeds did not rank similarly in scrotal circumference at different test stations. In the third data set, scrotal circumference and volume were essentially the same as scrotal length and width in ranking breeds. year X breed interactions were nonsignificant for all scrotal traits, indicating that breeds were ranked similar in different years with respect to scrotal dimensions. These results indicate that bulls of different breeds should not be compared to established standards; a more acceptable procedure would be the use of deviations from the respective breed-station-year means.

Aging↗

PubMed1982

Effects of postweaning rate of gain on onset of puberty and productive performance of heifers of different breeds.

Angus, (n = 78), Hereford (93), Red Poll (61), Brown Swiss (47), Charolais (36) and Simmental (90) heifers were used in a study designed to evaluate the effects of breed and postweaning rate of gain (low, L = .4 kg/d; medium, M = .6 kg/d; high, Hi = .8 kg/d) on the onset of puberty and subsequent maternal performance. After a 184 d feeding period, one-half of the heifers in each group were moved to pasture and one-half were kept in the feedlot through breeding (70 d), then moved to pasture. Breeds differed (P less than .01) in weight, height and condition. Increased postweaning rates of gain resulted in increased heifer weight (P less than .01), height (P less than .10) and condition (P less than .01) before calving (198 to 635 d) but these differences were not observed after rebreeding (930 d). Quadratic regressions of percentage pubertal vs age were significantly influenced by the interaction between breed and postweaning rate of gain. Both mean age and weight at puberty were influenced by breed (P less than .01) and postweaning rate of gain (P less than .01). No interactions were observed (P greater than .10). Calf birth weight was influenced (P less than .01) only by breed. Milk production was influenced by breed (P less than .01) and postweaning rate of gain (P less than .10). Significant time after parturition and time X breed interaction effects on milk production were observed. Calf weight at 120 d and at weaning was influenced by breed (P less than .01), heifer postweaning rate of gain (P less than .05) and sex (P less than .05). These data suggest moderate underfeeding or overfeeding during the postweaning period may have a prolonged influence on the productive performance of heifers and demonstrate that breeds differ widely in age at puberty and later productivity under the type of management and environment of this study.

Animals↗

PubMed1987

Growth performance for four breeds of swine: crossbred females and purebred and crossbred boars.

Purebred and two-breed cross (F1) boars were mated to F1 females to produce all possible three- and four-breed cross pigs involving the Duroc, Yorkshire, Landrace and Spotted breeds. Individual postweaning average daily gain (ADG), age at 100 kg (AGE) and probed backfat thickness at 100 kg (BF) data were collected on 3,456 pigs. A total of 213 pens with an average of 15.58 pigs per pen was evaluated for postweaning feed-to-gain ratio (F/G) and average daily feed consumption (ADF). Genotype X environment interactions, specifically breed X year-season farrowed and breed X parity (for ADG), were found to be highly significant. Certain results, however, were reasonably consistent across environments. Duroc-sired pigs grew more efficiently than other sire breed groups (3.11 vs 3.21 F/G), although there were no significant differences in ADF between sire groups. Duroc-sired pigs had less BF than other three-breed cross pigs, based upon within breed of dam comparisons, suggesting differences in composition between the more efficient Duroc-sired pigs and other breed groups. Landrace-sired pigs were fatter than other sire groups. No real differences between crossbred-sired pigs and the average of contemporary pure-bred-sired pigs were apparent for F/G, ADF, ADG, AGE, or BF. Assuming paternal heterosis to be zero, these results suggested recombination effects to be negligible for postweaning performance traits. Apart from via direct genetic effects, mating crossbred rather than purebred boars to females of different breeding should have little or no impact on feedlot performance of offspring produced.

Animals↗

PubMed1998

[Origin and differentiation of domestic goose breeds in China, inferred from mitochondrial DNA polymorphism].

Mitochondrial DNAs (mtDNAs) of 138 samples from 11 domestic goose breeds in China were investigated by digesting, with 19 restriction endonucleases. Of 19 enzymes used, seven (Bcl I, Dra I, Eco RV, Hae II, Hinc II, Kpn I, Sac I) detected polymorphic patterns. By combining 27 restriction morphs, 138 individuals were classified into 6 mtDNA haplotypes. Phylogenetic tree was constructed by using UPGMA. There was no shared haplotype between Yili breed and the other 10 breeds. Genetic distance and UPGMA tree also suggested that Yili breed and other breeds came from different ancestors. Yili breed originated from Anser anser and other 10 breeds originated from Anser cygnoides. Restriction morphs digested with 4 enzymes (EcoRV, Hae II, Hinc II and Kpn I) could be used as maternal genetic markers to distinguish the two types of domestic geese. Mitochondrial DNA polymorphism was observed in the ten breeds of Anser cygnoides. Nucleotide diversity (pi), genetic distance between the two types and the average genetic distance among the ten breeds were estimated to be 0.025%, 0.266%, 0.029%, respectively. The breeds with white plume were affected by founder effect when they were formed. Swan domestic geese, Anser cygnoides domesticus, in China might come from two different populations of Anser cygnoides at two different places.

Animals↗

PubMed1987

[Superovulation after administration of PMSG in cows of various breeds].

Superovulation response was studied to i. m. administration of 2500 and 3000 i. u. of PMSG (special product Folligon, Intervet Co.) in 67 breeding cows of the Black-Pied Lowland. Slovak Pied and Slovak Pinzgau breeds within the 9th to 12th days of their sexual cycles. The time which had elapsed from these cows' last calving ranged from 50 to 150 days and the number of their prior calvings ranged from one to ten. The best superovulation effect was obtained after the administration of 2500 i. u. PMSG in the Pinzgau breed: these cows had, on the average, 13.20 +/- 2.36 corpora lutea without non-ovulated follicles. At the PMSG dose increased to 3000 i. u., the number of yellow bodies rose to 18.11 +/- 1.12 and that of non-ovulated follicles to 3.46 +/- 0.46. In the Slovak Pied breed the average number of yellow bodies obtained after administration of 2500 i. u. PMSG was 11.74 +/- 1.27 and that of non-ovulated follicles was 0.44 +/- 0.02. At the PMSG dose of 3000 i. u., the number of yellow bodies increased to 15.49 +/- 1.62 and that of non-ovulated follicles increased up to 5.12 +/- 0.81. In the Black-Pied Lowland breed the lowest response was obtained: the i. m. administration of 2500 i. u. PMSG resulted in the formation of 9.5 +/- 0.84 yellow bodies and 1.16 +/- 0.26 non-ovulated follicles, and at the dose of 3000 i. u. the respective numbers were 13.41 +/- 0.89 and 3.07 +/- 0.39. Comparing the superovulation effect in dependence on age, the response of the cows of the Black-Pied Lowland and Slovak Pinzgau breeds to PMSG administration increases until the age of nine years (from 9.79 and 13.6 yellow bodies, respectively, on the average for the first five years to 12.71 and 17.99, respectively, in the ninth year); in the Slovak Pinzgau breed it decreases from 15.83, recorded in the first five years, to 8.28 +/- 1.68 in the ninth year. The number of non-ovulated follicles grows with age in the Slovak Pinzgau breed from 3.46 +/- 0.46 in the first five years to 3.64 between five and nine years of age and up to 4.44 +/- 0.52 after the ninth year, in the Slovak Pied breed from 0.79 to 4.21 +/- 0.38, and in the Black-Pied Lowland breed from 2.69 to 3.20 +/- 0.22 between the fifth and ninth year.

Animals↗

PubMed1994

Determination of evolutionary relationships among sheep breeds using microsatellites.

Eight ovine microsatellite loci were amplified in 40 to 50 unrelated individuals from six sheep populations representing five breeds: Romney, Border Leicester, Suffolk, Awassi, and both Australian and New Zealand Merino. For all of the microsatellite loci analyzed, there were highly significant differences in allele frequencies between samples from the different breeds. The allele frequencies generated can be used to determine the breed of an individual, given that it comes from one of the above breeds, to a high degree of accuracy. There were also some alleles that were found in only one breed, although these alleles were at such low frequencies that they are unlikely to be useful as markers for a breed. Genetic distances between breeds were obtained using Nei's formula to construct a phylogenetic tree. The tree grouped the Merino's in one branch and the Border Leicester, Suffolk, and Romney in another branch, while the Awassi, which was used as an outgroup, had its own branch. Using Nei's unbiased genetic distance formula to calculate the time of divergence of the British breeds from the Merino and the time of divergence between the Australian and the New Zealand Merino, we obtained t = 1094 and t = 227 years, respectively. Microsatellite genotyping in sheep appears to provide a useful tool for examining the evolutionary relationships between breeds.

Alleles↗

PubMed1982

Production characters of the Sahiwal and Ayrshire breeds and their crosses in Kenya.

Data were analysed for lactation character of Ayrshire, Ayrshire x Sahiwal, Sahiwal x Ayrshire and Sahiwal females and on survival and growth characters of progeny of Ayrshire, Sahiwal, Simmental and Mixed breed sires mated to these females in the temperate highlands ecological zone of Kenya. The Ayrshire females had significantly higher total lactation yield than the other breeding groups; however, the Ayrshire females received preferential treatment. Despite this the Sahiwal-Ayrshire crosses were superior (3.8%) to the Ayrshire females in productivity index per cow per year because of a shorter calving internal and a higher level of calf survival. Sahiwal females had significantly lower total lactation yield than Ayrshire and Sahiwal x Ayrshire cross females. At 2 years of age female progeny of Sahiwal and Simmental sires were significantly heavier than the female progeny of Ayrshire sires but not of Mixed breed sires, viz. Sahiwal x Ayrshire and calves with sires not known. The Ayrshire breed was shown to be superior to the Sahiwal breed in transmitted effects for milk production and the Sahiwal breed was superior to the Ayrshire breed in transmitted effects for growth rate. It is concluded that the Sahiwal breed has potential to contribute to both milk and beef production programmes when combined in crosses with Bos taurus breeds of cattle in ecological zones similar to the lower to mid-potential areas of the temperate highlands of Kenya.

Animals↗

PubMed2006

An evaluation of genetic diversity indices of the Red Bororo and White Fulani cattle breeds with different molecular markers and their implications for current and future improvement options.

The genetic diversity of the Red Bororo and White Fulani cattle breeds of Cameroon and Nigeria was assessed with a panel of 32 markers. Estimates for the various indices of genetic diversity, total number of alleles (TNA), mean observed number of alleles (MNA), mean effective number of alleles (MNE), observed heterozygosity (Hob) and expected heterozygosity (Hex), were higher at microsatellite loci than at protein loci. Mean Hex values were above 71% at microsatellite loci in all the breeds and ranged from 37% to 41.6% at milk protein loci and from 40.9% to 45.6% at blood protein loci. The highest TNA and MNA of microsatellites were recorded for the Nigerian White Fulani. MNE of milk protein loci was highest in the Cameroonian Red Bororo, while TNA of blood protein loci was highest in the Cameroonian White Fulani. The high genetic diversity levels indicate the presence of the necessary ingredients for improvement breeding and conservation. Multi-locus estimates of within-population inbreeding (f), total inbreeding (F) and population differentiation (theta) of the breeds were significantly different from zero, except for theta of blood proteins. A high level of gene flow was found between the breeds (5.829). The phylogenetic relationship existing among the four breeds is greatly influenced by location. The high gene flow between the breeds may lead to a loss of genetic diversity through genetic uniformity and a reduction in opportunities for future breed development. We propose an improvement scheme with aims to prevent loss of genetic diversity, improve productivity and reduce uncontrolled genetic exchanges between breeds.

Alleles↗

PubMed2026

Genomic diversity, inbreeding, and selection signatures in duroc, landrace, and yorkshire pigs from a long-term closed breeding system.

Duroc (DD), Landrace (LL), and Yorkshire (YY) are among the most widely used commercial pig breeds, having undergone intense long-term selection within closed breeding systems. This study presents a comprehensive genomic analysis of genetic diversity, inbreeding patterns, and selection signatures in DD, LL, and YY populations that have been subject to close breeding for over 15 years. Genomic and pedigree data were available for 1,088 animals (DD = 348, LL = 276, YY = 464), genotyped using the GenoBaits® Porcine 100 K SNP panel. Principal component analysis and genetic diversity metrics revealed distinct population structures among the three breeds. Pairwise genetic differentiation supported this pattern, with DD showing the greatest divergence from LL (0.34 ± 0.24) and YY (0.33 ± 0.24), while LL and YY were more closely related (FST = 0.22 ± 0.19). Linkage disequilibrium (LD) analysis further confirmed these differences, as DD exhibited the highest average r² (0.34), followed by LL (0.28) and YY (0.25). Within-breed genetic diversity metrics, including observed heterozygosity (HO: 0.37 in DD, 0.39 in LL, 0.38 in YY), expected heterozygosity (HE: 0.36 in DD, 0.37 in LL, 0.38 in YY), and minor allele frequency (MAF: 0.27 in DD, 0.28 in LL, 0.29 in YY), indicated greater genetic variability in LL and YY compared to DD. Runs of homozygosity (ROH) analyses revealed different patterns of autozygosity, with DD exhibiting more long ROH indicative of recent inbreeding, while YY harbored a higher number of short ROH, suggestive of more ancient demographic events. ROH-based inbreeding coefficients (FROH) consistently exceeded pedigree-based estimates (FPED) across all breeds, highlighting the presence of recent or unrecorded inbreeding that pedigree data may not fully capture. According to Generation Proxy Selection Mapping (GPSM), 17, 1, and 12 significant SNPs were detected in DD, LL, and YY, respectively. Functional annotation of ROH islands and GPSM-significant loci revealed both breed-specific and overlapping QTLs related to traits such as growth, reproduction, and carcass. In general, the findings of this study contribute to a deeper understanding of the genomic consequences of long-term closed breeding and provide reference information to support consideration of breeding strategies that balance continued selection for productivity with the maintenance of genetic diversity in modern commercial pig populations.

Animals↗

PubMed2006

ZENK labeling within social behavior brain regions reveals breeding context-dependent patterns of neural activity associated with song in male European starlings (Sturnus vulgaris).

In songbirds, song learning and production are regulated by the song control system. How the rest of the brain interacts with song nuclei to ensure that song is produced in an appropriate context is not yet clear. In male European starlings (Sturnus vulgaris), breeding context song is sexually motivated, whereas, non-breeding context song is more broadly socially motivated. Brain regions involved in regulating social behavior might differentially regulate starling song depending upon the context in which it is produced. Here, we compared the number of ZENK-labeled cells in song and social behavior nuclei in starlings singing in either a breeding or a non-breeding context. Numbers of ZENK-labeled cells in HVC related positively to song produced in both contexts. Interestingly, numbers of ZENK-labeled cells in one subdivision of the lateral septum (LS) related negatively to breeding context song but positively to non-breeding context song. In a subdivision of the medial bed nucleus of the stria terminalis (BSTm) ZENK labeling only related positively to non-breeding context song, whereas, in the ventromedial nucleus of the hypothalamus (VMH) ZENK labeling showed a tighter positive relationship with breeding context song. Together, these findings indicate that social behavior brain regions outside of the song control system regulate singing behavior differently depending upon whether song is sexually or more broadly socially motivated. Breeding context-dependent regulation of song by LS, BSTm, and VMH suggests that these nuclei may be central to adjusting song production so that it occurs in response to appropriate social and environmental stimuli.

Animals↗

PubMed1996

Allergens of horse dander: comparison among breeds and individual animals by immunoblotting.

Some patients who are allergic to horses have reported that they can tolerate certain breeds, and the presence of breed-specific allergens has been suggested. Breeders and patients with asthma have claimed that Bashkir horses are nonallergenic. We used sodium dodecylsulfate-polyacrylamide gel electrophoresis and immunoblotting to determine IgE-binding profiles of extracts of dander obtained from horses of several breeds. We found considerable inter-breed and within-breed variation but no breed-specific allergens. Danders from all breeds investigated contained the most important allergens, and the allergenic content of dander from Bashkir horses was similar to that of other breeds. Difference in scale production could account for differences in sensitivity to breeds and individual horses.

Allergens↗

PubMed2001

Repeat breeding and subsequent reproductive performance in Swedish Landrace and Swedish Yorkshire sows.

The objective of the present study was to analyse the association between repeat breeding (RB) in gilts/sows and their subsequent reproductive performance as well as the impact of interactions between repeat breeding and factors like parity number, boar breed, season and mating type (MT) on subsequent reproductive performance in Swedish Landrace (L) and Swedish Yorkshire (Y) sows. Data analysed included 7040 sows (3654 L and 3386 Y), farrowing during January 1994 until December 1999 in 11 L and 8 Y nucleus herds. The study was assigned as a cohort design and the aim was to study gilts/sows from their first mating as gilts until mating after third parity. Analysis of variance was applied to continuous data and logistic regression was applied to categorical data. Percentages of litters as a result of repeat breeding in sow parities 1-3 were 6.1, 12.0 and 6.3% for L sows and 6.7, 13.1 and 7.4% for Y sows. For parity 3, the incidence of litters resulting from repeat breeding was significantly higher (P<0.001) in Y than in L sows. The proportion of irregular return to oestrus (>24 days after first mating) was higher (P<0.01) in primiparous sows than in multiparous sows (69% versus 61%). On average, litters resulting from repeat breeding were larger (P<0.001) than litters resulting from non-repeat breeding (NR) (about 0.5 piglets per litter) in both L and Y sows. For Y sows, if the previous litter was a result of repeat breeding, the subsequent reproductive cycle had 2.7% higher RR (P<0.05) and 2.4% lower FR (N.S.) compared with sows that were not repeat bred. The same trend was found in L sows (1.4% higher RR and 1.3% lower FR) but the differences were not significant. Among the sows removed from the herds, about 24% of L and 28% of Y were culled due to reproductive problems (gilts not included). In addition, a number of sows from these nucleus herds were also culled due to low breeding value and poor conformation.

Animals↗

PubMed1998

Immunization of sheep against GnRH early in life: effects on gonadotropins, follicular growth and responsiveness of granulosa cells to FSH and IGF-I in two breeds of sheep with different prolificacy (Romanov and Ile-de-France).

The profile Romanov (R, ovulation rate = 3) and non-prolific Ile-de-France (IF, ovulation rate = 1) breeds were compared for their ovarian sensitivity to gonadotropins and IGF-I before puberty. For this purpose, the effects of in vivo immunization against GnRH on populations of ovarian follicles and in vitro sensitivity of granulosa cells to FSH and IGF-I were studied in prepuberal lambs from both breeds. Seventeen prepuberal lambs of each breed were actively immunized against GnRH between 3 wk and 6 mo of age. Relative to untreated lambs, FSH levels at 4, 5, and 6 mo of age were (respectively) 41%, 25% and 29% for IF, and 43%, 24%, and 36% for R lambs. In a first experiment, histological analysis of ovaries was performed. Immunization treatment decreased the number of small (100-390 microns in diameter) and large size follicles (< 1500 microns) in both breeds at 6 mo of age. In both breeds, gonadotropin (FSH-LH-hCG) treatment increased the number of large size follicles (< 1500 microns in diameter) and induced the formation of preovulatory follicles in immunized as well as untreated lambs. The ovulation rate was less in immunized animals, but it was not different between breeds. In a second experiment, the effects of FSH and IGF-I were studied on granulosa cells from follicles between 1000 and 2000 microns in diameter. In both breeds, IGF-I increased granulosa cell proliferation, but enhanced progesterone secretion was observed only in R lambs after FSH and IGF-I stimulation. Granulosa cell response to FSH treatment was lost by immunization, whereas response to IGF-I remained unchanged in both breeds. These results indicate that long-term immunization of prepuberal lambs against GnRH reduced systemic concentrations of FSH, follicular development, and response to gonadotropins in vivo, similarly in the prolific R and the non-prolific IF breed. However, granulosa cells from R lambs had higher steroidogenic capacities and were more responsive to FSH. In addition, these results suggest that IGF-I could play an important role in regulating growth of small follicles both in immunized and non-immunized lambs.

Animals↗

PubMed2006

Breed predisposition for BSE: epidemiological evidence in Bavarian cattle.

We present epidemiological data from Bavaria that indicates that animals of the Brown Swiss (BS) cattle breed might be more susceptible to BSE than animals from other breeds, both in terms of disease prevalence and length of the incubation period. BS animals were disproportionately represented among the BSE cases (BS represented about 9% of the susceptible population but 27% of actual cases). BS were slaughtered at a higher age (5.8 years vs. 5.0 years for other breeds), and there is a higher prevalence of feeding proprietary feeds to BS calves than calves from other breeds. There was no difference in the recorded feeding practice of BSE-positive animals from BS or other breeds. These results would lead to expect a higher prevalence of BSE in the BS population, with BS BSE animals being of equal age or older than BSE animals from other breeds. In contrast, median age at BSE detection was significantly lower in BS animals than in other breeds (61.4 vs. 68.8 months). There was no difference in the identification categories of BSE between BS animals and animals of other breeds that could explain this difference in age. BS cattle are reported to have more octapeptid repeats in the prion protein gene than other breeds, which could account for shorter incubation periods and higher susceptibility. These observations suggest that BS animals and their tissues should be used in further studies into genetic determinants of BSE susceptibility in cattle.

Age Factors↗

PubMed2001

Inter-breed differences in equine forelimb kinematics at the walk.

Linear, temporal and angular biokinematic characteristics of the forelimb at the walk in different breeds were determined, highlighting inter-breed differences. Twenty-three healthy stallions were used: ten Andalusians (AN), seven Arabs (AR) and six Anglo-Arabs (AA). Height at the withers was significantly different between groups (P < 0.001). Six trials per horse were recorded using a levelled video camera (sampling frame rate 25 frames/s), digitized and analysed using a semi-automatic movement analysis system. No statistically significant differences in speeds were recorded between breeds (P > 0.05). The only temporal parameter which was similar in the three breeds was the moment at which the hoof reached the highest point in its trajectory. The variables presenting the most significant differences were the percentages of deceleration and propulsion within the stance phase. ANOVA for angular variables showed that the greatest difference was in the range of angular movement of the carpal joint, being higher in AN, due to a lower minimum value. In the fetlock joint, the greatest difference was observed in minimum values, which differed in all three breeds. Significant inter-breed differences were also observed for maximum limb retraction, being lowest in the AN group, followed by the AA and AR groups. This finding was reflected in the angular range of motion, despite smaller differences in the degree of limb protraction; very similar values were reported in all three breeds. As regards the elbow joint, no inter-breed differences were observed in terms of minimum values, whereas differences were recorded for maximum and angular range of motion, higher values being displayed by the AR and AN groups than by AA animals. In conclusion, inter-breed differences may be determined in equine forelimb biokinematics at the walk. This study distinguished between AN, AR and AA horses.

Animals↗

PubMed1998

Livestock variation of linked microsatellite markers in diverse swine breeds.

A panel of nine framework microsatellites (MS) linked to the Calcium Release Channel (CRC) locus on swine chromosome 6 (SSC6) was developed from the consensus genetic map. MS were screened across groups of unrelated animals from Yorkshire, Hampshire, Duroc, Landrace and Meishan swine breeds. Unique MS alleles for Yorkshire, Duroc, Landrace and Meishan breeds, and statistically significant (P < .05) associations between breeds and allele frequencies were found for each MS. Although breed marker heterozygosities ranged from 0.0 (S0035 in Duroc) to 0.92 (S0087 in Meishan), Correspondence Analysis identified MS alleles uniquely associated with either the Meishan breed, western breeds or alleles common to all breeds. Furthermore, an overall marker heterozygosity of < 0.70 demonstrates the need for multiple MS panels to accommodate reduced within-breed differences for identification of quantitative trait loci (QTL), marker assisted selection (MAS) programs or parental identification in commercial breeds.

Alleles↗

PubMed2006

A method for discriminating a Japanese chicken, the Nagoya breed, using microsatellite markers.

The Nagoya breed native to Japan is popular as a dual-purpose breed for eggs and meat. The current study describes a method to discriminate between the Nagoya breed and other breeds and commercial stocks of chicken. Four strains of the Nagoya breed established at the Aichi-ken Agricultural Research Center were analyzed using 25 microsatellite markers. In these strains, 5 of the markers (ABR0015, ABR0257, ABR0417, ABR0495, and ADL0262) had a single allele. Other chicken samples (448) of various breeds and hybrids were analyzed using the same 5 markers. None of these chicken samples had the same allele combination as the Nagoya breed strains. These 5 microsatellite markers provide a practical method to accurately discriminate the Nagoya breed from other chicken breeds.

Animals↗