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Remote sensing of planetary properties and biosignatures on extrasolar terrestrial planets.

The major goals of NASA's Terrestrial Planet Finder (TPF) and the European Space Agency's Darwin missions are to detect terrestrial-sized extrasolar planets directly and to seek spectroscopic evidence of habitable conditions and life. Here we recommend wavelength ranges and spectral features for these missions. We assess known spectroscopic molecular band features of Earth, Venus, and Mars in the context of putative extrasolar analogs. The preferred wavelength ranges are 7-25 microns in the mid-IR and 0.5 to approximately 1.1 microns in the visible to near-IR. Detection of O2 or its photolytic product O3 merits highest priority. Liquid H2O is not a bioindicator, but it is considered essential to life. Substantial CO2 indicates an atmosphere and oxidation state typical of a terrestrial planet. Abundant CH4 might require a biological source, yet abundant CH4 also can arise from a crust and upper mantle more reduced than that of Earth. The range of characteristics of extrasolar rocky planets might far exceed that of the Solar System. Planetary size and mass are very important indicators of habitability and can be estimated in the mid-IR and potentially also in the visible to near-IR. Additional spectroscopic features merit study, for example, features created by other biosignature compounds in the atmosphere or on the surface and features due to Rayleigh scattering. In summary, we find that both the mid-IR and the visible to near-IR wavelength ranges offer valuable information regarding biosignatures and planetary properties; therefore both merit serious scientific consideration for TPF and Darwin.

Astronomical Phenomena↗

Radiation exposure predictions for short-duration stay Mars missions.

The human radiation environment for several short-duration stay manned Mars missions is predicted using the Mission Radiation Calculation (MIRACAL) program, which was developed at NASA Langley Research Center. This program provides dose estimates for galactic cosmic rays (GCR) and large and ordinary solar proton flare events for various amounts of effective spacecraft shielding (both operational and storm shelter thicknesses) and a given time history of the spacecraft's heliocentric position. The results of this study show that most of the missions can survive the most recent large flares (if they were to occur at the missions' perihelion) if a 25 g/cm2 storm shelter is assumed. The dose predictions show that missions during solar minima (when solar flare activity is the lowest) are not necessarily the minimum dose cases, due to increased GCR contribution during this time period. The direct transfer mission studied has slightly lower doses than the outbound Venus swingby mission [on the order of 10-20 centi-Sieverts (cSv) lower], with the greatest dose differences for the assumed worst case scenario (when the large flares occur at perihelion). The GCR dose for a mission can be reduced by having the crew spend some fraction of its day nominally in the storm shelter (other than during flare events).

Bone Marrow↗

Mutagenic activation of aromatic amines by molluscs as a biomarker of marine pollution.

Mutagenic activation of arylamines by mollusc S9 fractions was evaluated as a biomarker for marine pollution. Two bivalve species were used as bioindicators, the common mussel (Mytilus edulis) and the striped venus (Chameleo gallina). A strain of Salmonella typhimurium overproducing O-acetyltransferase was used as indicator of mutagenicity. Mussels from an area of the North Atlantic Spanish zone that was exposed to an accidental crude oil spill were compared to bivalves from a reference area. C. gallina samples were from low polluted and highly polluted areas of the South Atlantic Spanish littoral. The promutagen 2-aminoanthracene (2-AA) was activated to mutagenic derivative(s) by S9 fractions from both C. gallina and M. edulis. Animals from contaminated sites showed higher arylamine activation capabilities than reference animals. This was further correlated with the mutagenic activities of corresponding cyclopentone-dichloromethane animal extracts. 2-AA activation by mollusc S9 was potentiated by alpha-naphthoflavone (ANF), known to inhibit PAH-inducible CYP1A cytochromes from vertebrates, but inhibited by methimazole (MZ), a substrate of the flavin monooxygenase (FMO) system. 2-AA-activating enzymes were mainly cytosolic; this localization clearly suggests that such activity could be attributed to soluble enzymes, different from the CYP1A or FMO systems. In conclusion, mutagenic activation of arylamines by mollusc S9, using as indicator a strain of Salmonella typhimurium that overproduces O-acetyltransferase, could be a reliable biomarker for marine pollution.

2-Acetylaminofluorene↗

Abnormal development of the sinuatrial venous valve and posterior hindbrain may contribute to late fetal resorption of vitamin A-deficient rat embryos.

BACKGROUND: Normal embryonic development and survival in utero is dependent on an adequate supply of vitamin A. Embryos from vitamin A-deficient (VAD) pregnant rats fed an inadequate amount of all-trans retinoic acid (atRA; 12 microg per g of diet or approximately 230 microg per rat per day) exhibit severe developmental abnormalities of the anterior cardinal vein and hindbrain by embryonic day (E) 12.5 and die shortly thereafter. METHODS: In the present study, we sought to determine whether supplementation of VAD-RA supported (12 microg per g of diet) pregnant rats with retinol (ROL) at the late-gastrula (presomite or rat E9.5) or early somite stages (E10.5), or provision of higher levels of atRA throughout this period could prevent abnormalities in the developing cardiovascular and nervous systems. RESULTS: A newly described defect in the sinuatrial venus valve along with enlarged anterior cardinal veins and nervous system abnormalities and the later death of embryos are prevented by supplementing pregnant animals with ROL on the morning of E9.5. If ROL supplementation is delayed by 1 day (E10.5), most embryos are abnormal and die by E18.5. Supplementation of VAD rats with atRA (250 microg per g of diet) between E8.5 and E10.5 also prevents the cardiovascular and nervous system abnormalities and a significant number of these embryos survive to parturition. Thus, high levels of atRA can obviate the need for ROL between E9.5 and E10.5. CONCLUSIONS: These results support an essential role for retinoid signaling between the late gastrula and early somite stages in the rat embryo for normal morphogenesis of the primitive heart tube and the posterior hindbrain. Further, these results suggest that embryonic death occurring at midgestation in the VAD rat may be linked to the abnormal development of one or both of these embryonic structures.

Abnormalities, Multiple↗

Cooling mechanisms of the planetary thermospheres: the key role of O atom vibrational excitation of CO2 and NO.

Cooling due to infrared emissions from O atom excited CO2 and NO is a critically important process in the thermal budget of the terrestrial thermosphere. Increasing CO2 density due to human activity makes the role of its emission particularly worthy of quantitative evaluation. Furthermore, the O atom excited 15 microns CO2 emission has a unique role in the lower thermosphere of Venus where it is the only significant cooling mechanism; it is also an important process in the Martian thermosphere. The experimental and theoretical status of these rate coefficients is reviewed and the unsatisfactory current state of knowledge is pointed out.

Atmosphere↗

A study on the blood vascular system of the lamprey gill filament.

The blood vessels in the gill filaments of lamprey, Lampetra japonica, were studied with an electron microscope. Each gill filament is supplied by an afferent filament artery (afa) flanked by a pair of filament veins (fv), along the outer border of the axial plate, and an efferent filament artery (efa) along the inner, free border. Between these arteries are interposed the cavernous body and the blood lacunae. The marginal channel arises from the cavernous body, which leads to the afa, runs along the free border of the secondary lamella collecting oxygenated blood from the lamellar blood lacunae, and finally joins efa. This channel is considered to play an important role in the gill circulation as a bypass between afa and efa. Pillar cells were found only in the blood lacunae of the axial plate and the secondary lamellae. The basal lamina is generally absent on the vascular wall, but only a small amount of dense material could be seen on the basal surface of endothelial cells of afa and fv: this is regarded as an anchoring device between the cell and connective tissue fibrils. Fenestrations are generally absent in the endothelial layer but numerous gaps were seen in the wall of fv. Arterio-venus anastomoses were found between afa or the cavernous body and fv, and between efa or the collecting arteries of the efferent branchial artery and the peribranchial venous sinus. The anastomosing channel consists of the inner endothelial layer and the outer smooth muscle layer, which is thicker in the intermediate portion of the channel. The endothelial cells called "AVA cells" here are characterized by (1) dense cytoplasms, (2) apical microvilli and (3) basal cytoplasmic processes closely associated with smooth muscle cells.

Animals↗

New onset focal weakness in children with Down syndrome.

New onset focal weakness is relatively common in patients with Down syndrome (DS), and has broad differential diagnosis. Ten cases of new onset focal weakness in patients with DS were encountered or are currently being followed in two DS clinics, with a combined population of patients of approximately 850, for a clinic population prevalence of 1.2%. The median age at presentation was 4 years old (range 1 month-44 years). The causes of new onset focal weakness were: stroke from Moyamoya disease (two patients); stroke from vaso occlusive disease (one patient); stroke from venus sinus thrombosis (one patient); traumatic subdural hematoma (one patient); brain abscess (one patient); spinal cord injury (SCI) from cervical spinal stenosis (two patients); SCI from atlantoaxial instability (AAI) (one patient); and brachial plexus injury (one patient). Of the 10 patients with focal weakness, 8 had potentially treatable conditions, and 5 had surgery. The differential diagnosis of new onset focal weakness in DS is broad, with diseases reported involving all levels of the nervous system from brain to muscle. For some diagnoses, expeditious diagnosis may improve outcome.

Adolescent↗

Use of shape to distinguish Chamelea gallina and Chamelea striatula (Bivalvia: Veneridae): Linear and geometric morphometric methods.

The commercially fished striped venus clams Chamelea gallina and C. striatula (Bivalvia: Veneridae) are difficult to distinguish by inexperienced observers and the taxonomy of these species is still an issue of discussion. The differences in shape between C. gallina and C. striatula from Portuguese coastal waters were studied through conventional linear and geometric morphometric analysis, using both contour (elliptic Fourier analysis) and landmark-based methods. The relationships shell length vs. height, width, and total weight were significantly different between species. However, because there was a considerable overlap in the data sets, the species could not be distinguished using any combination of those linear measurements. Geometric morphometric methods provided shape variables that led to 0-6% misclassification rates between species; linear morphometric measures led to 16.8% error. Contour analysis revealed differences primarily in the shell umbo and lunular area. The umbo was more "sharp" and the lunula less pronounced in C. striatula than in C. gallina. Generalized procrustes superimposition (landmark analysis) showed that the main differences between species reside in the length of the pallial sinus. Thus, an index was developed (PI: Pallial Index = pallial sinus length/shell length), which was successfully used to separate the species (with 100% correct classification), i.e., specimens with PI lower than 0.119 belonged to C. gallina, whereas greater PI values were attributed to C. striatula. The use of these geometric morphometric methods allowed the detection of differences in shape between these two species and to develop an easy-to-use identification index. We encourage the development of analogous indices that apply the methods of geometric morphometrics to distinguish between other species whose identification is complicated.

Animals↗

Synthetic spectra of simulated terrestrial atmospheres containing possible biomarker gases.

NASA's proposed Terrestrial Planet Finder, a space-based interferometer, will eventually allow spectroscopic analyses of the atmospheres of extrasolar planets. Such analyses would provide information about the existence of life on these planets. One strategy in the search for life is to look for evidence of O3 (and hence O2) in a planet's atmosphere; another is to look for gases that might be present in an atmosphere analogous to that of the inhabited early Earth. In order to investigate these possibilities, we have calculated synthetic spectra for several hypothetical terrestrial-type atmospheres. The model atmospheres represent four different scenarios. The first two, representing inhabited terrestrial planets, are an Earth-like atmosphere containing variable amounts of oxygen and an early Earth-type atmosphere containing methane. In addition, two cases representing Mars-like and early Venus-like atmospheres were evaluated, to provide possible "false positive" spectra. The calculated spectra suggest that ozone could be detected by an instrument like Terrestrial Planet Finder if the O2 concentration in the planet's atmosphere is > or = 200 ppm, or 10(-3) times the present atmospheric level. Methane should be observable on an early-Earth type planet if it is present in concentrations of 100 ppm or more. Methane has both biogenic and abiogenic sources, but concentrations exceeding 1000 ppm, or 0.1% by volume, would be difficult to produce from abiogenic sources alone. High methane concentrations in a planet's atmosphere are therefore another potential indicator for extraterrestrial life.

Astronomy↗

The anticoagulant and anti-inflammatory roles of the protein C anticoagulant pathway.

Recent research has revealed a number of links between inflammation and coagulation. The protein C anticoagulant pathway appears to be the major pathway involved in the cross-talk between inflammation and coagulation. Studies indicate that inflammatory mediators can downregulate key components of the pathway through transcriptional control, proteolytic inactivation and oxidant damage. In turn, in vivo and in vitro studies have revealed mechanisms by which the components of the pathway may inhibit inflammatory responses. These include inhibition of cytokine responses to endotoxin, inhibition of leukocyte attachment to the activated endothelium and inhibition of thrombin and factor Xa generation in the microcirculation where both enzymes can lead to endothelial cell activation, further potentiating the inflammatory response. The ability of the protein C system to modulate both inflammation and coagulation may explain i part why specific defects in the pathway appear to be associated with both arterial and venus thrombosis.

Activated Protein C Resistance↗

The ligand binding site of the synaptosomal choline transporter: a provisional model based on inhibition studies.

A topographic model of the ligand binding site of the choline transporter was deduced from inhibition studies with the help of CPK molecular models. It is posited that there are two identical or closely similar hydrophilic anionic sites separated from each other by an hinged, essentially planar but conformationally flexible cationic hydrophobic domain. Subsequently to attachment of external choline to either one of the anionic sites, both sites cooperate in enveloping the ligand by a Venus fly-trap mechanism. This leads to rapid configurational changes by which the closed-liganded form of the transporter opens up to the interior to release the bound choline. Intracellular K+, a ligand for the choline-binding site, is proposed to be counter-transported by a reversal of the above mechanism.

Binding Sites↗

The Martian atmosphere: some unanswered questions.

The study of the Martian atmosphere and its significance for the possible origin of life on Mars is still very incomplete. Further investigations are needed to define the total volatile inventory, the early history of the atmosphere, and the relationship of the atmosphere to the question of indigenous life. In addition, studies of Venus, comets, and the Jupiter system will add significantly to our abilities to understand the early history of Mars.

Carbon↗

A proposal concerning the origin of life on the planet earth.

The widely accepted Oparin thesis for the origin and early evolution of life seems sufficiently far from the true state of affairs as to be considered incorrect. It is proposed that life on earth actually arose in the planet's atmosphere, however an atmosphere very different from the present one. Because of an extremely warm surface, the early earth may have possessed no liquid surface water, its water being partitioned between a motten crust and a fairly dense atmosphere. Early preliving systems are taken to arise in the droplet phase in such an atmosphere. The early earth, which resembled Venus then and to some extent now, underwent a transition to its present condition largely as a result of the evolution of methanogenic metabolism.

Animals↗

Life as a planetary phenomenon.

The success of recent spacecraft from the U.S.A. and the U.S.S.R. has given us a wealth of new data about the planets in our solar system. We can now develop a much better rationale for the reasons that abundant life is only found on our planet. Mars, smaller and more distant from the Sun, may nevertheless hold clues to the early development of Earth's atmosphere. The origin of life on Mars early in that planet's history cannot be ruled out. Titan offers a contemporary example of extremely primitive conditions, where chemical reactions resembling those that preceded the development of life on Earth may be occurring today. Venus and Jupiter illustrate the need for a planet to be the right size and the right distance from the sun if chemical evolution leading to the origin of life is to occur.

Atmosphere↗

Phylogenetic analysis of Veneridae (Bivalvia): comparison of molecular and palaeontological data.

An approximately 400-bp-long portion of the 16s rRNA gene sequence has been determined for the venerid clams Chamelea gallina (Chioninae), Dosinia lupinus (Dosiniinae), Pitar rudis, Callista chione (Pitarinae), Tapes decussatus, T. philippinarum, Venerupis (= Paphia) aurea (Tapetinae), and Venus verrucosa (Venerinae). Neighbor-joining and maximum parsimony trees support the results of traditional classification methods at the subfamily level but do not support the concept of a genus Tapes. The transversion divergence rate estimated on the basis of the palaeontological record for the C. gallina/V. verrucosa separation and for the Pitarinae is very close (0.14-0.16% per Myr, respectively) to that of ungulates and cetaceans, while the Tapetinae exhibit a much higher (0.36% per Myr) rate.

Animals↗

The small-subunit rRNA gene sequences of venerids and the phylogeny of bivalvia.

The complete nucleotide sequence of the 18S subunit of ribosomal DNA (rDNA) was determined for the venerid clams Callista chione (Pitarinae) and Venus verrucosa (Venerinae). Comparison of the new sequences with the published sequences of 1 annelid, 2 gastropods, 2 polyplacophorans, and 19 bivalves showed that when the annelids are used as outgroup the gastropods diverge from the bivalves, which form a cluster including the polyplacophorans. When the gastropods alone were compared with the bivalves, the latter split in two groups corresponding to the two subclasses of Heterodonta and Pteriomorpha. The former include two taxa that diverged early, Galeomma and Tridacna, while the Veneridae and Mactridae form two sister groups. In contrast to previous reports and in line with morphological data, the Ostreidae are included in the Pteriomorphia and form a monophyletic group.

Animals↗

Rock-shells (Thais clavigera) as an indicator of As, Cu, and Zn contamination on the Putai Coast of the black-foot disease area in Taiwan.

This study presents the distribution of arsenic (As), copper (Cu), and zinc (Zn) in various seafoods-oysters (Crassostrea gigas), false fusus (Hemifuscus tuba), venus clams (Cyclina sineasis), green mussels (Perna viridis), blood clams (Arca granosa), flounders (Psettodes erumei), and rock-shells (Thais clavigera) collected from the Putai coast of the black-foot disease (BFD) area in Taiwan. Special attention is paid to evaluate the relationships among As, Cu, and Zn and effect of body size on metal concentration in Thais clavigera. Maximum Zn and Cu geometric mean (GM) concentrations (GM = 615 and 376 microg/g, dry wt, respectively) are found in oysters (Crassostrea gigas), and the values are much higher than those of the other organisms by about 1.7-208 and 1.8-375 times, respectively. Similarly, Thais clavigera has a high capacity for accumulating Cu and Zn collected from the same location. One interesting point is that relatively high As concentrations (GM = 65.7 microg/g, dry wt) in Thais clavigera are found as compared with those in other organisms (range from GM = 2.37 to 40.2 microg/g, dry wt). The As concentrations are significantly higher in Thais clavigera (1.62-27.7 times) than those in other organisms (p < 0.05), except for the false fusus (Hamifuscus tuba). A linear regression analysis shows a significant increase in Zn concentration with increasing Cu concentration in Thais clavigera. On the other hand, the As concentration is correlated with Cu and Zn concentrations (r = 0.77 and 0.77, respectively; p < 0.05) in Thais clavigera. Double logarithmic plots of metal content and concentration against dry-body weight and shell length show linear relationships. The result indicates that large individuals have higher contents of Cu, Zn and As, and have slopes of 1.58, 1.38, and 1.34, respectively. In addition, metal concentrations against shell length for all animal sizes also indicate that Cu, Zn and As have slopes of 1.92, 1.18, and 1.11, respectively. In conclusion, Thais clavigera has a high capactiy for accumulating As, Cu, and Zn and is a potential bioindicator for monitoring As, Cu and Zn.

Animals↗

[Between symbol and symptom: pain and its meanings in classical antiquity].

According to semiotics, which may be defined as the doctrine of the essential nature and fundamental varieties of signs, objects, and interpretants, pain is considered to be a sign (significant) with very different meanings (significance) either as a naturalistic symptom (of disease) or as a symbol used in a metaphorical context. When following this methodological perspective it is possible to interpret medical as well as poetic writings on equal terms. In Graeco-Roman medical texts pain was mostly understood as a result and an indicator of disease, but nonetheless as a symptom which seemed to be actively produced by the affected body. Especially in the Corpus Hippocraticum dating from the 5th and 4th century B. C. this materialistic and at the same time psychosomatic attitude can be noticed. Aristotle (4th century B. C.), Celsus (1st century A. D.), and the famous experimental physiologist Galen (2nd century A. D.) agreed that pain was a sign of evil which should be fought without exception. It was Galen who added the disturbance of function (functio laesa) as the fifth cardinal sign of inflammation to the four well-known cardinal signs of Celsus (rubor, calor, tumor, dolor). He also coined the term [see text] to characterize an attack of migraine. In algotherapy, Galen used a complex pharmacological system which was based upon the four cardinal qualities of humoral pathology. On the other hand, pain was designed as a multi-dimensional symbol by the famous Graeco-Roman epic poets. In Homer's Odyssey (8th century B. C.), pain appears transformed into the shape of a scar which is visible and palpable on the hero's leg like an identification tag, whereas in Virgil's Aeneids (1st century B. C.) pain symbolizes weakness and defencelessness which can only be alleviated by the goddess Venus.

English Abstract↗