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At least 271 records · Page 15Linked to original sources
PubMed2004

Quantitative trait loci mapping for dairy cattle production traits using a maximum likelihood method.

A maximum likelihood method was developed for QTL mapping in half-sib designs and compared to the regression method in analyses of both field and simulated data. The field data consisted of milk production evaluations of 433 progeny tested sons of 6 sires and 64 microsatellite markers distributed over 12 chromosomes. Based on permutation tests, 5 significant QTL were detected in the field data by the regression method compared with 10 by the maximum likelihood method (P < 0.05). In field data analysis, the maximum likelihood method detected more significant QTL and had a smaller residual variance than the regression method. The simulation included 9 scenarios differing in number of families, family size, QTL variance, and marker density, each replicated 100 times. The simulation results suggested that, as for the regression method, the precision of estimating QTL from the maximum likelihood method improves with increasing number of sons per sire, increasing the ratio of QTL to phenotypic variance, and decreasing marker interval. The maximum likelihood method had a smaller dispersion of estimated QTL positions than the regression method in 6 of 9 scenarios simulated. Overall, the maximum likelihood method shows potential advantage in QTL detection over the regression method, especially in the situations with less favorable conditions for QTL detection.

Algorithms↗
PubMed2002

Quantitative trait loci associated with traits determining grain and stover yield in pearl millet under terminal drought-stress conditions.

Drought stress during the reproductive stage is one of the most important environmental factors reducing the grain yield and yield stability of pearl millet. A QTL mapping approach has been used in this study to understand the genetic and physiological basis of drought tolerance in pearl millet and to provide a more-targeted approach to improving the drought tolerance and yield of this crop in water-limited environments. The aim was to identify specific genomic regions associated with the enhanced tolerance of pearl millet to drought stress during the flowering and grain-filling stages. Testcrosses of a set of mapping-population progenies, derived from a cross of two inbred pollinators that differed in their response to drought, were evaluated in a range of managed terminal drought-stress environments. A number of genomic regions were associated with drought tolerance in terms of both grain yield and its components. For example, a QTL associated with grain yield per se and for the drought tolerance of grain yield mapped on linkage group 2 and explained up to 23% of the phenotypic variation. Some of these QTLs were common across stress environments whereas others were specific to only a particular stress environment. All the QTLs that contributed to increased drought tolerance did so either through better than average maintenance (compared to non-stress environments) of harvest index, or harvest index and biomass productivity. It is concluded that there is considerable potential for marker-assisted backcross transfer of selected QTLs to the elite parent of the mapping population and for their general use in the improvement of pearl millet productivity in water-limited environments.

Journal Article↗
PubMed2005

Deficient behavioral inhibition and anomalous selective attention in a community sample of adolescents with psychopathic traits and low-anxiety traits.

Socialization is the important process by which individuals learn and then effectively apply the rules of appropriate societal behavior. Response modulation is a psychobiological process theorized to aid in socialization by allowing individuals to utilize contextual information to modify ongoing behavior appropriately. Using Hare's (1991) Psychopathy Checklist and the Welsh (1956) anxiety scale, researchers have identified a relatively specific form of a response modulation deficit in low-anxious, Caucasian psychopaths. Preliminary evidence suggests that the Antisocial Process Screening Device (APSD; Frick & Hare, 2001) may be used to identify children with a similar vulnerability. Using a representative community sample of 308 16-year-olds from the Child Development Project (Dodge, Bates, & Pettit, 1990), we tested and corroborated the hypotheses that participants with relatively low anxiety and high APSD scores would display poorer passive avoidance learning and less interference on a spatially separated, picture-word Stroop task than controls. Consistent with hypotheses, the expected group differences in picture-word Stroop interference were found with male and female participants, whereas predicted differences in passive avoidance were specific to male participants. To the extent that response modulation deficits contributing to poor socialization among psychopathic adult offenders also characterize a subgroup of adolescents with mild conduct problems, clarification of the developmental processes that moderate the expression of this vulnerability could inform early interventions.

Adolescent↗
PubMed2006

Factors affecting placental traits and relationships of placental traits with neonatal behaviour in goat.

The relationships between placental characteristics and litter weight, factors affecting these characteristics, and the relationship between these characteristics and neonatal behaviour of goat kids were investigated in this study. The study was carried out over three consecutive years and animal material consisted of total 152 Turkish Saanen goats and their 230 kids. The results of the study demonstrated that there were positive correlations between litter weight (LW), cotyledon number (CN), placental weight (PW) (r=0.64 and 0.76, P<0.01), but there was negative correlation between LW and cotyledon density (CD) (r=-0.42, P<0.01). CD was negatively correlated with PW (r=-0.61, P<0.01). CN and PW were influenced by the parity of doe, birth type-sex combination, buck within years and year of the study. On the other hand, parity and birth type-sex combination had no effect on PE (P>0.05), but buck within year affected placental efficiency (P<0.01). CD was only influenced by the parity of doe (P<0.01). Duration of birth (D) was not significantly related with CD, but if CD declined, it prolonged (r=-0.23, P>0.05). There were strong relationships between CD and birth-to-standing (B-St), and CD and birth-to-suckling (B-Su) (r=-0.42 and -0.51, P=0.01 and P<0.01). The results of the present study have shown similarities to the findings of the studies in sheep. Further studies are required to investigate the basis of the relationship between CD and neonatal behaviour.

Animals↗