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PubMed2006

Agronomic aspects and environmental impact of reusing marginal water in irrigation: a case study from Egypt.

Egypt produces approximately 2.4 million m3 of secondary treated wastewater (TWW) annually, used for irrigation directly or indirectly by blending with agricultural drainage water (BDW). The annual re-use of (BDW) is approximately 4 million m3. The safe and efficient use of marginal water (BDW and TWW) is a core objective of this study which has been operating from 1997 to date. After six growing seasons the main results can be summarized as follows: MAXIMIZING CROP PRODUCTION: TWW can be used for high production of oil crops (canola, soybean sunflower or maize) compared to fresh water, while BDW can be used for high production of tolerant crops (cotton and sugar beet). CROP QUALITY: using marginal water increases the concentration of elements (Pb, B, Ni, Co) in all crops but these elements were under critical levels (there were no toxicity hazards). It is better to use alternative irrigation with fresh water under a drip irrigation system to maximise crop production and minimise the adverse effects of such water in field crops quality. SOIL POLLUTION AND SALINITY BUILD UP: A drip irrigation system under alternative irrigation by fresh with TWW or BDW reduces salinity build up risks and the levels of elements (Pb, B, Ni, Co) in soil compared to re-use marginal water. SOIL PATHOGENS: Using marginal water slightly contaminated the soil with total faecal coliform (TFC), mites, shigella and salmonella. PLANT ANATOMY: No great changes in anatomical disturbance where induced in different structures of plants which were reduced at maturity stage. PRIMARY GUIDELINES FOR RE-USING MARGINAL WATER: From obtained results it can be recommended to use marginal water with salinity content ranged between 1.1 to 3.64dS/m, and elemental contents (Pb 3.0-3.51 ppm), (B 0.05-1.67 ppm), (Co 0.04-0.07 ppm), (Ni 0.08-0.15 ppm) for safe (field, vegetable and medicinal) crops production. REUSE BIO SOLIDS FOR CROP PRODUCTION: Sewage sludge produced from treated wastewater can be safely used by mixing with rice straw (1:1 w/w) for economic crop production and saving mineral fertilisers. GENERAL CONCLUSION: In the North Nile Delta, marginal water (especially BDW) can be safely used without significant negative impact on the environment, but there is a need for multi-disciplinary, long-term research to investigate irrigation with marginal water in terms of the environment, public health and agricultural productivity.

Agriculture↗
PubMed2003

[Soil organic carbon pool and its spatial distribution pattern in the Circum Bohai Region].

The research and management of soil carbon pool and the effect of land-use on it are the key project of study on global change. In this paper, the data of 1,374 soil profiles in the Circum Bohai Region were used to estimate the soil organic carbon (SOC) pool of this region. The results showed that in this region, the total soil organic carbon pool in 1 m depth was 2.1 Pg C, and the biggest SOC pool was brown soil, occupying 55.6% of the total SOC. The second one was moisture soil, accounted for 26.9%. The SOC pools of aeolian sandy soil and dark brown soil were very small, only about 0.1% of the total. However, the soil organic carbon density (OCD) of boggy soil was the biggest (22.90 kg C.m-2), the second was dark brown soil (16.04 kg C.m2), and the lowest were aeolian sandy soil (2.88 kg C.m-2) and solonchak (6.0 kg C.m-2), implying that desertification and salinalization could reduce soil organic carbon. Moreover, the results also suggested that the topsoil held 673.30 Tg C. It meant that there was about one-third of the total SOC could be easy to be disturbed. According to the OCD at its level distribution gradient, it could be divided into four regions, i.e., coastal region, plain region, northwestern region, and hilly region. The order of OCD from high to low was hilly region, northwestern region, plain region, and coastal region. This regulation reflected not only the role of climate and landform, but also the effect of human activity intensification on SOC. Therefore, it was very important to protect and manage the land in this region well for the SOC maintenance and the sustainable land use.

Carbon↗
PubMed2026

Functional study of the AfRAP2 gene in Amorpha fruticosa L. tolerance to saline-alkali and drought stress.

BACKGROUND: Amorpha fruticosa L. is a leguminous shrub with high tolerance to drought, poor soil, and saline-alkali stress conditions. As a member of the family of transcription factors in higher plants, the ethylene response factor AP2/ERF plays a crucial role in both plant adaptation to abiotic stress and in growth and development. In this study, based on genes identified from the transcriptomic sequencing of Amorpha fruticosa L. under drought stress, the upregulated gene AfRAP2 was isolated from its seedlings, with the aim of elucidating its stress-response function using molecular biological techniques. RESULTS: In this study, the AfRAP2 gene was cloned from the leaves of Amorpha fruticosa L. using RT-PCR. Bioinformatics analysis revealed that AfRAP2 contains an AP2 domain and belongs to the DREB subfamily of the AP2/ERF transcription factor family, showing close phylogenetic relationships with LaEREBP from Lathyrus albus. Real-time quantitative PCR (RT-qPCR) results indicate that AfRAP2 is expressed in various tissues of Amorpha fruticosa L., with the highest expression in leaves and the lowest in stems, furthermore, its expression is significantly upregulated in roots and leaves upon induction by NaHCO3 and PEG6000. Subcellular localization experiments confirmed that the AfRAP2 protein is localized to the nucleus, and GUS histochemical staining assay revealed that its promoter drives GUS expression in anthers. Resistance analysis of overexpressing yeast strains showed that yeast transformed with the AfRAP2 gene exhibited significantly better growth under sorbitol, mannitol, and NaHCO3 stress conditions compared to the control, indicating that this gene enhances yeast tolerance to drought and saline-alkali stress. We screened transgenic tobacco and Populus davidiana × P. alba var. Pyramidalis. The results showed that under natural drought and saline-alkali stress treatments, the transgenic lines exhibited significantly improved growth and higher activities of the physiological indicators of catalase (CAT), superoxide dismutase (SOD), and peroxidase (POD) compared with wild-type plants, indicating that the overexpression of the AfRAP2 gene plays a key role in the response to saline-alkali stress and drought stress. CONCLUSION: In summary, AfRAP2 contains an AP2 domain and belongs to the DREB subfamily of transcription factors, under abiotic stress induced by NaHCO₃ and mannitol, it can induce the expression of the AfRAP2 gene in tobacco and Populus davidiana×P. alba var. pyramidalis. AfRAP2 plays a vital role in the plant response to saline-alkali stress and drought stress and is a promising candidate gene for stress-tolerant breeding.

Plant Proteins↗
PubMed1990

[Isolation of Actinomycetales from the soil of Kazakhstan on selective media with antibiotics].

About 3000 actinomycetes were isolated from various soil samples collected in 11 regions of Kazakhstan. 62.7 per cent of them proved to be antagonists. For isolation of the strains, selective media supplemented with antibiotics were used. Kanamycin promoted growth of Actinomadura and Nocardia. Rubomycin promoted growth of Actinomadura. Tavromycetin and roseofungin were used as selective agents for the first time. Tavromycetin favoured isolation of Actinomadura and Nocardia. Roseofungin favoured isolation of Actinomadura. Light chestnut and serozemic soils were the most rich in antagonists (67.1 and 61.3 per cent, respectively) while saline and chestnut soils were the poorest in antagonists (32.2 and 30.6 per cent, respectively). Actinomadura were more frequent in light-chestnut light-loamy and serozemic soils. Half of the antibiotics isolated in the form of concentrates were identified with the known antibiotics or classified as belonging to various groups. A culture producing a novel antibiotic was isolated.

Actinomyces↗
PubMed1988

Survival of Yersinia enterocolitica in the environment.

When Yersinia enterocolitica was introduced into soils (or physiological saline), very little decrease in the population was observed throughout the test period. If the soil was allowed to air dry slowly, only 0.1% (2.8 x 10(3) colony forming units/g of soil) of the original population added still remained viable by day 10. On the other hand, the introduced organisms disappeared rapidly in river water but their longevities could be extended significantly if a eucaryote inhibitor was added to the river water or the river water was passed through a 0.8-micron membrane filter to remove eucaryotic predators. Furthermore, the rapid decrease of the Yersinia population coincided with an increase in numbers of protozoans. However, when Yersinia was added to filter-sterilized river water or when small numbers of the organism, below the threshold level believed necessary for active predation to occur, were added to the river water, no response in predators was observed; nevertheless, the population of Yersinia still showed a continued decline. When the organism was introduced into sephadex-treated river water or groundwater, its survival improved significantly compared with its survival in nontreated water samples. Low ambient temperature dramatically increased its ability to survive in the aquatic environment. It is concluded that, in addition to the temperature factor, the longevity of Y. enterocolitica in river water is chiefly regulated by predators and toxin producers.

Animals↗
PubMed2003

Genome-wide transcriptional profiling analysis of adaptation of Bacillus subtilis to high salinity.

The gram-positive soil bacterium Bacillus subtilis often faces increases in the salinity in its natural habitats. A transcriptional profiling approach was utilized to investigate both the initial reaction to a sudden increase in salinity elicited by the addition of 0.4 M NaCl and the cellular adaptation reactions to prolonged growth at high salinity (1.2 M NaCl). Following salt shock, a sigB mutant displayed immediate and transient induction and repression of 75 and 51 genes, respectively. Continuous propagation of this strain in the presence of 1.2 M NaCl triggered the induction of 123 genes and led to the repression of 101 genes. In summary, our studies revealed (i) an immediate and transient induction of the SigW regulon following salt shock, (ii) a role of the DegS/DegU two-component system in sensing high salinity, (iii) a high-salinity-mediated iron limitation, and (iv) a repression of chemotaxis and motility genes by high salinity, causing severe impairment of the swarming capability of B. subtilis cells. Initial adaptation to salt shock and continuous growth at high salinity share only a limited set of induced and repressed genes. This finding strongly suggests that these two phases of adaptation require distinctively different physiological adaptation reactions by the B. subtilis cell. The large portion of genes with unassigned functions among the high-salinity-induced or -repressed genes demonstrates that major aspects of the cellular adaptation of B. subtilis to high salinity are unexplored so far.

Adaptation, Physiological↗
PubMed2006

Distribution of metals in the edible plants grown at Jajmau, Kanpur (India) receiving treated tannery wastewater: relation with physico-chemical properties of the soil.

The implications of metal contamination of agricultural soils due to long term irrigation with treated industrial wastewater and their subsequent accumulation in the vegetables/crops growing on such soils has been assessed in an area of industrial complex, Jajmau, Kanpur (India). Physico-chemical properties of the soil were also studied. The soil and vegetables/crops were sampled from an area of 2100 acre agricultural land and analyzed for physico-chemical properties and metal accumulation in different parts of the plants. The comparison of the data of physico-chemical properties of control and contaminated soil showed that salinity, electrical conductivity, available phosphorous, sodium and potassium content (both water soluble and exchangeable) were found high in contaminated soil. The analysis of plant available metal content in the soil showed the highest level of Fe, which ranged from 529.02 to 2615 microg g(-1) dw and lowest level of Ni (3.12 to 10.51 microg g(-1) dw). The analysis of the results revealed that accumulation of toxic metal Cr in leafy vegetables was found more than fruit bearing vegetables/crops. Thus, it is recommended that the leafy vegetables are unsuitable to grow in such contaminated sites. It is important to note that toxic metal, Ni was not detected in all the plants. The edible part of the vegetables (under ground) such as, garlic (19.27 microg g(-1) dw), potato (11.81 microg g(-1) dw) and turmeric (20.86 microg g(-1) dw) has accumulated lowest level of toxic metal, Cr than leafy and fruit bearing vegetables. In some fruit part of vegetables such as, bitter gourd, egg plant, jack tree, maize and okra, the accumulation of Cr was not detected and may be grown in this area.

Environmental Monitoring↗
PubMed1980

Sweet clover production and agronomy.

Sweetclover has a notorious reputation for causing "sweetclover disease" when improperly cured. In spite of this, however, sweetclover remains a useful forage legume with valuable agronomic traits. It is drought-resistant and well adapted to Western Canada. Sweetclover is the highest yielding legume forage in this region and is valuable in soil improvement, silage, hay and pasture production and a prized crop for the honey producer. It is the most saline-tolerant of the legumes and is particularly useful on saline "white alkali" soils where cereals and other crops cannot grow. Special precautions are necessary to avoid spoilage and concomitant dicoumarol formation in preserving sweetclover hay and silage. Feeding recommendations are suggested for the safe utilization of spoiled forage. Low coumarin cultivars of sweetclover are completely safe and will not result in sweetclover disease despite spoilage. The breeding program at Saskatoon is expected to produce a new low coumarin (yellow flowered) sweetclover cultivar within the next two years.

Agriculture↗
PubMed2006

Natural radioactivity intake into wheat grown on fertilized farms in two districts of Pakistan.

The use of phosphate fertilizers on agricultural farms enhances gamma-ray activity concentration in the farms and therefore absorbed dose rates to the public. The most common natural radionuclides in fertilizer and soil are (40)K, (226)Ra and (232)Th. Agricultural farms at four locations in two districts in Pakistan consisting of saline and normal soils had been under fertilizer treatment for the past 30, 20, 10 and 0 y, therefore, natural radioactivity has been measured in soil samples from these sites to investigate the effect of fertilizers in soil and wheat grown in these sites. Radioactivity measured in soil of the sites under investigation was 550-644, 20-35 and 42-58 Bq kg(-1) for (40)K, (226)Ra and (232)Th, respectively. Wheat was grown in the farms and radioactivity transferred from soil to roots, shoots and grains was also measured. Relatively high natural radioactivity has been observed in the fertilized agricultural farms and in the wheat plants grown in these farms. From the total amount of an element uptaken in a plant, distribution of the element in different parts of the plant has been studied. The distribution of potassium was almost uniform in roots, shoots and grains of wheat; that of radium was different in the three parts of wheat; and that of thorium was almost equal in shoots and grains but quite large in the roots. Soils to grain transfer factors of the natural radionuclides have been determined as 3-4 x 10(-2) for (226)Ra, 2-3 x 10(-2) for (232)Th and 17-20 x 10(-2) for (40)K. Annual doses of (40)K and (226)Ra received by intake of grain products have been estimated to lie within range while the dose received from intake of (232)Th is larger than the range specified in UNSCEAR report 2000.

Environmental Exposure↗
PubMed2005

Influence of arbuscular mycorrhizal fungi and kinetin on the response of mungbean plants to irrigation with seawater.

Increasing use of saline water in irrigation can markedly change the physical and chemical properties of soil. An experiment was carried out to investigate the interaction between the mycorrhizal fungus Glomus clarum, isolated from a saline soil, and kinetin on the growth and physiology of mungbean plants irrigated with different dilutions of seawater (0, 10, 20, and 30%). The growth, chlorophyll concentration and sugar content of mycorrhizal plants was greater than that of non-mycorrhizal plants under all conditions (with or without seawater). The dry weight of both mycorrhizal and non-mycorrhizal mungbean plants irrigated with 10% seawater was significantly increased by treatment with kinetin. The mycorrhizal symbiosis increased root:shoot dry weight ratio, concentrations of N, P, K, Ca and Mg, plant height, protein content, nitrogen or phosphorus-use efficiencies, and root nitrogenase, acid or alkaline phosphatase activities of seawater-irrigated mungbean plants, with little or no effect of kinetin. Kinetin treatment generally decreased chlorophyll concentration and sugar content in mycorrhizal plants as well as Na/N, Na/P Na/K, Na/Ca and Na/Mg ratios. Root colonization by G. clarum was increased by irrigation with seawater, and kinetin had no consistent effect on fungal development in roots. This study provides evidence that arbuscular mycorrhiza can be much more effective than kinetin applications in protecting mungbean plants against the detrimental effects of salt water.

Kinetin↗
PubMed1988

[Soil dust as a factor which changes the histochemical picture of the rat lung].

White Wistar female rats only once were administered intratracheally a suspension of the soil dust in the physiologic saline. The respirable fraction of the soil dust was used for preparing the suspension of the latter. The experiment was carried out in 2 groups of rats. The animals of the 1st group received the soil dust suspension which was the mixture of the soil samples from 3 different places in Poland, the animals of the 2nd group from 3 other places in Poland. The control animals were once administered the physiologic saline. 9 months after the application of dust, the specimen of the left lung were taken for histochemical examinations. The reactions to the activity of succinic and lactate dehydrogenase, of tetrazole reductase NADP, and of acid phosphatase and ATP-ase were performed. The changes in the activity of the studied respiratory enzymes and the increase of the reaction to the acid phosphatase were observed. The results reveal the disorders of the oxidation-reduction processes and the intensification of the lytic processes in the pulmonary parenchyma of the animals exposed to the action of the soil dust.

Acid Phosphatase↗
PubMed2006

Laboratory simulated dissipation of metsulfuron methyl and chlorimuron ethyl in soils and their residual fate in rice, wheat and soybean at harvest.

Two sulfonylurea herbicides, metsulfuron methyl (Ally 20 WP) and chlorimuron ethyl (Classic 25 WP) were evaluated for their dissipation behaviour in alluvial, coastal saline and laterite soils under laboratory incubated condition at 60% water holding capacity of soils and 30 degrees C temperature was maintained. In field study herbicides were applied twice for the control of grasses, annual and perennials broad leaves weeds and sedges in rice, wheat and soybean to find out the residual fate of both the herbicides on different matrices of respective crops after harvest. Extraction and clean up methodologies for the herbicides were standardized and subsequently analyzed by HPLC. The study revealed that the half-lives of metsulfuron methyl and chlorimuron ethyl ranged from 10.75 to 13.94 d irrespective of soils and doses applied. Field trials with rice, wheat and soybean also revealed that these two herbicides could safely be recommended for application as no residues were detected in the harvest samples.

Arylsulfonates↗
PubMed2005

The restoration potential of the Mesopotamian marshes of Iraq.

Uncontrolled releases of Tigris and Euphrates River waters after the 2003 war have partially restored some former marsh areas in southern Iraq, but restoration is failing in others because of high soil and water salinities. Nearly 20% of the original 15,000-square-kilometer marsh area was reflooded by March 2004, but the extent of marsh restoration is unknown. High-quality water, nonsaline soils, and the densest native vegetation were found in the only remaining natural marsh, the Al-Hawizeh, located on the Iranian border. Although substantially reduced in area and under current threat of an Iranian dike, it has the potential to be a native repopulation center for the region. Rapid reestablishment, high productivity, and reproduction of native flora and fauna in reflooded former marsh areas indicate a high probability for successful restoration, provided the restored wetlands are hydraulically designed to allow sufficient flow of noncontaminated water and flushing of salts through the ecosystem.

Animals↗
PubMed1999

Transport and fate of volatile organic chemicals in unsaturated, nonisothermal, salty porous media: 2. Experimental and numerical studies for benzene.

Simultaneous transport in soil of heat, water, potassium chloride, and benzene was studied experimentally and numerically. A laboratory experiment permitted observation of temperature, water content, chloride concentration and benzene concentration distributions in soil. A numerical model based upon newly developed transport theory was used to simulate the observed data. Transport of benzene in soils was simulated numerically under isothermal and nonisothermal conditions. Simulated results for benzene were compared with experimental data. Experiments were conducted in sealed aluminum columns (0.05-m I.D. and 0.20-m length) with sterilized salinized unsaturated Fayette soil. The soil had initial water content of 0.22 m(3)/m(3) and initial inorganic solute concentration of 0.20 mol/kg. Benzene was injected at one end of each soil column (top end) to provide 143 g/m(3)gas. The results of this study indicated that transport models need to include the effect of temperature and temperature gradient to describe the movement of volatile chemicals in soils.

Benzene↗
PubMed1997

Effects of elevated selenium and salinity concentrations in root zone on selenium and salt secretion in saltgrass (Distichlis spicata L.).

The effects of elevated selenium (Se) and salinity concentrations in the root zone on Se and salt secretion and accumulation were studied for an inland (Kesterson) and a coastal (Bodega Bay) saltgrass in sand culture and under greenhouse conditions. The results of this study indicate that the secretory mechanism of the saltgrass exhibits high ion specificity. Plants of both ecotypes were more efficient at Cl- and Na+ secretion than at SO4(2-) and Se secretion, suggesting that the saltgrass secretion mechanism is adapted primarily to saline environments high in NaCl. The saltgrass plants of the Kesterson ecotype secreted more Se than the Bodega Bay plants when treated with Se alone. However, the Bodega Bay plants secreted more Se than the Kesterson plants when the plants were treated with Se+NaCl. These differences reflect a ecotypical difference in which the Kesterson plants are more adaptive to the seleniferous soil, and the Bodega Bay plants are more adaptive to a coastal saline soil high in NaCl. Sulfate availability inhibited both Se accumulation and Se secretion in the plants of both ecotypes by approximately 98%. Ion secretion molar ratios of Na:Cl were calculated and the results suggest that Na+ secretion is dependent on the availability of Cl-. Selenium was taken up by plants with little discrimination, and thus it may be regarded as a master of chemical mimicry sharing similar physical and chemical properties with sulfur (S). Selenium and salt accumulation indices and secretion efficiency indices were calculated and found that the accumulation indices were higher for Se than for S, suggesting that Se uptake may be more passive and less regulated by active transport than S. Secretion efficiency was much higher for Na+ and Cl- than for Se and SO4(2-), but the efficiency indices between ecotypes were comparable, suggesting that the secretion mechanism in this species is designed mainly for adaptation of high NaCl concentrations. About 85% of the secreted Se was found in selenate form. This finding suggests that the mechanism of Se translocation and Se secretion in the saltgrass resembles the movement of selenate in xylem found in nonhalophytic plants. Less than 15% of organic Se was detected in the secretions and only trace amount of selenite was detected. Overall, the Se secretion mechanism in saltgrass does not seem to contribute substantial Se speciation in the plant soil system.

Poaceae↗
PubMed1998

The Malone (antegrade colonic enema) procedure: early experience.

PURPOSE: The aim of this study was to assess the results of the Malone (antegrade colonic enema) procedure for fecal incontinence. METHODS: By a retrospective review of patients treated between 1990 and 1996 in a tertiary referral center, 36 patients were treated with a Malone procedure. Age at operation was 8.3 (range, 3 to 14) years, the mean period of follow-up was 39 (range, 9 to 72) months. The indication was fecal soiling in 35 and chronic constipation in one. The underlying diagnosis was an anorectal anomaly in the majority of patients. The appendix was used in 30 patients and a cecal flap in six, and a submucosal antireflux procedure was also performed in 10. In 35 patients, a circular stoma was created and in one a V flap was used. Antegrade colonic enemas were performed daily in 10, alternate days in 23, and in three patients the stoma was no longer used. Enemas were performed with a 10F catheter using a mixture of phosphate enema (or liquorice) and saline. RESULTS: Fecal soiling was completely controlled in 28 patients, and eight children soiled more than once a week. Complications occurred in 15 patients; the main problem was stenosis of the conduit, which occurred in 9 of 30 appendiceal stomas and three of six cecal stomas. Stomal stenosis was treated with surgical revision in eight patients. Additional complications were reflux through the stoma (n=2), pain on catheterisation (n=1), and small bowel obstruction (n=1). In one patient the Malone has been converted to a colostomy. CONCLUSIONS: The Malone procedure is a simple technique that can effectively control fecal incontinence in the majority of cases. It appeared to be better in older children. Stomal stenosis is a frequently encountered problem that may require surgical revision.

Appendix↗
PubMed2026

Hypoosmolarity inhibits ammonia oxidation by terrestrial and freshwater Nitrosopumilaceae members.

Salinity strongly influences the physiology and distribution of nitrifying microorganisms, yet the effects of low salinity remain understudied. This study investigates the impact of hypoosmolarity on different groups of ammonia oxidizers in soil and freshwater reservoirs, as well as in pure culture isolates. In soil microcosms amended with ammonium, at low salinity levels (~120 μS/cm), comparable to values commonly found in pristine terrestrial and freshwater environments, the abundance of ammonia-oxidizing bacteria (AOB), dominated by Nitrosomonas oligotropha, significantly increased. In contrast, the growth of ammonia-oxidizing archaea (AOA), dominated by "Candidatus Nitrosotenuis" of the Nitrosopumilaceae family, was stimulated by high salinity (~760 μS/cm). In ammonium-fed freshwater microcosms, the abundance of AOB, dominated by N. oligotropha, significantly increased under both low (~170 μS/cm) and high salinity (~850 μS/cm) conditions. In the presence of allylthiourea (50 μM), used to inhibit bacterial ammonia oxidation, AOA were sensitive to low salinity in both soil and freshwater microcosms. Consistently, culture-dependent studies revealed marked growth inhibition of terrestrial AOA, especially members of Nitrosopumilaceae, under hypoosmolarity, unlike AOB and complete ammonia oxidizer (comammox) strains. Genomic analyses, along with transcriptomic studies, suggested that the sensitivity of AOA to hypoosmolarity stress was possibly due to a lack of osmoregulatory transport systems and their S-layer cell wall structure. Overall, this study indicates hypoosmolarity as an important factor shaping the ecological niches and distribution of ammonia oxidizers, as well as nitrification activities, in terrestrial and freshwater environments that are increasingly affected by intensified water cycles due to global change.

Ammonia↗
PubMed2004

Comparing the solid phase and saline extract Microtox assays for two polycyclic aromatic hydrocarbon-contaminated soils.

The performance of remedial treatments is typically evaluated by measuring the concentration of specific chemicals. By adding toxicity bioassays to treatment evaluations, a fuller understanding of treatment performance is obtained. The solid phase Microtox assay is a useful tool in characterizing the toxicity of contaminated soils and sediments. This study compares the performance of the solid phase and saline extract Microtox assays in two experiments using two soils contaminated with polycyclic aromatic hydrocarbons (PAHs). The first experiment, conducted to refine the solid phase assay procedures, evaluated sample holding times, sample replication, and reference toxicant controls. The effective concentration reducing light emission by 50% (EC50) of four samples was measured with eight replicates of each sample. Samples were stored for as long as two weeks without showing substantial changes in toxicity. For future studies, three replicates of each sample are recommended because that degree of replication yielded a statistical power of more than 95% in most samples. Phenol was a reliable reference toxicant with a mean EC50 of 21.76 and a 95% confidence interval of 15.6 to 27.9 mg/L. In a second experiment, the solid phase Microtox assay was compared to saline extract Microtox assays with mixing times ranging from 5 min to 16 h. The solid phase assay was more sensitive yielding EC50s 7 to 50 times lower than the extract EC50s. In addition, the saline extract assays displayed results that varied for mixing times of less than 2 h. Based on these two experiments, the solid phase Microtox test has proved to be a useful assay for measuring the toxicity of PAH-contaminated soils.

Biological Assay↗