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At least 235 records · Page 13Linked to original sources
PubMed1989

Burrowing behavior in wild house mice: variation within and between populations.

Burrowing behavior was assessed on 120 lab-reared house mice (Mus domesticus) derived from five geographic populations representing a north-south cline along the east coast of the United States. Mice were placed individually into Plexiglas containers filled with sand and peat moss, and their burrows were excavated 24 h later. Seven measures were taken and reduced by principal-components analysis to two factors for further analysis. Marked differences existed within, but not between populations, and members of full-sib families built qualitatively and quantitatively similar burrows. The lack of a geographic cline and the apparent high heritability of burrowing behavior do not lend support to its use as a major thermoregulatory adaptation.

Animals↗
PubMed2004

Clinal variation in body and cell size in a widely distributed vertebrate ectotherm.

Bergmann's rule states that, among conspecific populations, individuals are larger in cooler than in warmer environments as a consequence of selection related to heat conservation. Many of the most comprehensive assessments of Bergmann's rule to date have examined clinal patterns in body size among species assemblages. Our study is a more direct test of Bergmann's rule because we examine the pattern within a single, widely distributed species. We examined geographic variation in body and cell size in the spotted turtle ( Clemmys guttata). Our analysis of 818 turtles collected from the entire range (45-28 degrees N), indicated that body size increased with latitude; however, the relationship was driven by a population of large turtles at the northern extreme of the species' range. When the northern population was removed from the analyses, Bergmann's rule was not supported, and the smallest turtles occurred near the central part of the species' distribution. Recent literature has suggested that latitudinal clines in body size may simply be a physiological byproduct of the effects of temperature on cell division, resulting in larger cells, and hence larger organisms, from cooler temperatures. Measurements of the diameter of skin cells did not support the hypothesis that cell size increases with latitude and decreases with temperature in the spotted turtle, nor was there a significant relationship between body size and cell size. Our study suggests that neither Bergmann's rule nor cell size variation sufficiently explain the body size cline observed in the spotted turtle. We hypothesize that patterns in body size are related to variation in female size at maturity and reproductive cycles.

Animals↗
PubMed2006

Homer proteins control neuronal differentiation through IP(3) receptor signaling.

Neurons expand, sustain or prune their dendritic trees during ontogenesis [Cline, H.T. (2001). Dendritic arbor development and synaptogenesis. Curr. Opin. Neurobiol. 11, 118-126; Wong, W.T. and Wong, R.O.L. (2000) Rapid dendritic movements during synapse formation and rearrangement. Curr. Opin. Neurobiol. 10, 118-124] which critically depends on neuronal activity [Wong, W.T., Faulkner-Jones, B.E., Sanes, J.R. and Wong, R.O.L. (2000) Rapid dendritic remodeling in the developing retina: dependence on neurotransmission and reciprocal regulation by Rac and Rho. J. Neurosci. 20, 5024-5036; Li, Z., Van Aelst, L. and Cline, H.T. (2000) Rho GTPases regulate distinct aspects of dendritic arbor growth in Xenopus central neurons in vivo. Nat. Neurosci. 3, 217-225; Wong, W.T. and Wong, R.O.L. (2001) Changing specificity of neurotransmitter regulation of rapid dendritic remodeling during synaptogenesis. Nat. Neurosci. 4, 351-352.] and sub-cellular Ca(2+) signals [Lohmann, C., Myhr, K.L. and Wong, R.O. (2002) Transmitter-evoked local calcium release stabilizes developing dendrites, Nature 418, 177-181.]. The role of synaptic clustering proteins connecting both processes is unclear. Here, we show that expression levels of Vesl-1/Homer 1 isoforms critically control properties of Ca(2+) release from intracellular stores and dendritic morphology of CNS neurons. Vesl-1L/Homer 1c, an isoform with a functional WH1 and coiled-coil domain, but not isoforms missing these features were capable of potentiating intracellular calcium signaling activity indicating that such regulatory interactions function as a general paradigm in cellular differentiation and are subject to changes in expression levels of Vesl/Homer isoforms.

Animals↗
PubMed2005

Tension versus ecological zones in a two-locus system.

Previous theories show that tension and ecological zones are indistinguishable in terms of gene frequency clines. Here I analytically show that these two types of zones can be distinguished in terms of genetic statistics other than gene frequency. A two-locus cline model is examined with the assumptions of random mating, weak selection, no drift, no mutation, and multiplicative viabilities. The genetic statistics for distinguishing the two types of zones are the deviations of one- or two-locus genotypic frequencies from Hardy-Weinberg equilibrium (HWE) or from random association of gametes (RAG), and the deviations of additive and dominance variances from the values at HWE. These deviations have a discontinuous distribution in space and different extents of interruptions in the ecological zone with a sharp boundary, but exhibit a continuous distribution in the tension zone. Linkage disequilibrium enhances the difference between the deviations from HWE and from RAG for any two-locus genotypic frequency.

Ecosystem↗
PubMed2002

Chromosomal inversion polymorphism in Afrotropical populations of Drosophila melanogaster.

When 41 populations from Africa (south of the Sahara) and Indian Ocean islands were analysed for their chromosomal inversion polymorphism, 34 rearrangements were found, including the four common cosmopolitans (In(2L)t, In(2R)NS, In(3L)P and In(3R)P), four rare cosmopolitans (In(2L)NS, In(3R)C, In(3R)Mo and In(3R)K) and six African polymorphic ('recurrent') endemics. Mean inversion frequencies per major autosome arm were positively and, generally, highly correlated to each other. There was no altitudinal nor latitudinal cline of inversion frequency, except for one African polymorphic endemic. Significant longitudinal clines were detected for In(2L)t, In(3L)P and In(3R)K; in all cases, inversion frequencies decreased eastward. Principal components analysis and ANOVA made it possible to distinguish three groups of populations. A high level of polymorphism was found in populations from west tropical Africa. The other low altitude populations from the mainland were moderately polymorphic, whereas the lowest levels of polymorphism were those of high altitude populations and of Indian Ocean islands. Moreover, some regional and local differentiation was also found. The frequency of unique autosomal inversions was not different from those found in Asia, Australia and America, but was significantly higher than that in Europe and North Africa. A West-East differentiation was also observed for the African polymorphic endemics. The present geographic pattern suggests a long, patchy evolution with restricted gene flow, followed by the modern period with numerous recent migrations linked to human transportation.

Africa South of the Sahara↗
PubMed1989

Random and site-directed mutagenesis of bacterial luciferase: investigation of the aldehyde binding site.

Numerous luciferase structural gene mutants of Vibrio harveyi have been generated by random mutagenesis and phenotypically characterized [Cline, T.W., & Hastings, J.W. (1972) Biochemistry 11, 3359-3370]. All mutants selected by Cline and Hastings for altered kinetics in the bioluminescence reaction had lesions in the alpha subunit. One of these mutants, AK-20, has normal or slightly enhanced thermal stability and enhanced FMNH2 binding affinity but a much-reduced quantum yield of bioluminescence and dramatically altered stability of the aldehyde-C4a-peroxydihydroflavin-luciferase intermediate (IIA), with a different aldehyde chain length dependence from that of the wild-type luciferase. To better understand the structural aspects of the aldehyde binding site in bacterial luciferase, we have cloned the luxAB genes from the V. harveyi mutant AK-20, determined the nucleotide sequence of the entire luxA gene, and determined the mutation to be TCT----TTT, resulting in a change of serine----phenylalanine at position 227 of the alpha subunit. To confirm that this alteration caused the altered kinetic properties of AK-20, we reverted the AK-20 luxA gene by oligonucleotide-directed site-specific mutagenesis to the wild-type sequence and found that the resulting enzyme is indistinguishable from the wild-type luciferase with respect to quantum yield, FMNH2 binding affinity, and intermediate IIA decay rates with 1-octanal, 1-decanal, and 1-dodecanal. To investigate the cause of the AK-20 phenotype, i.e., whether the phenotype is due to loss of the seryl residue or to the properties of the phenylalanyl residue, we have constructed mutants with alanine, tyrosine, and tryptophan at alpha 227.(ABSTRACT TRUNCATED AT 250 WORDS)

Aldehydes↗
PubMed1976

Annual cycles in the incidence of b chromosomes in the grasshopper Myrmeleotettix maculatus (acrididae: orthoptera).

The frequency of B chromosomes has been determined for several stages in the grasshopper life-cycle, over three generations, in three natural populations spanning a steep cline in East Anglia. This has revealed a rise in B frequency in prediapause eggs, a fall during the winter in the embryos and a rise in the early nymphs in certain situations. The causes of these effects are discussed and also their importance, along with meiotic drive, in maintaining an environmentally correlated cline of stable adult B frequencies.

Animals↗
PubMed1982

Evolution of Drosophila on the newer Hawaiian volcanoes.

The 20-year odyssey taken by the Hawaiian Drosophila project has recently become focussed on a selected microcosm: this consists of the Island of Hawaii ("the Big Island") and one of its endemic species. Drosophila silvestris. Both the island and the species are considerably less than one million years old. Along with a morphologically distinct, but partially sympatric, close relative, D. heteroneura, silvestris inhabits moderate-altitude rainforests. They are the only members of the planitibia subgroup that occur on this island. The distribution of these species discontinuous due to the dissection of the forests by recent lava flows and to the irregular distribution of their main host plants. Although allozyme heterozygosity within both species is considerable, local populations of both species show high similarity coefficients. The two species are, furthermore, virtually indistinguishable electrophoretically; nevertheless, significant differences in single-copy DNA have been demonstrated. Within silvestris, five inversion polymorphisms are widespread; six others have more restricted distributions. Populations in some of the geologically newer areas are the most polymorphic, both chromosomally and morphologically. Altitudinal clines of gene arrangement frequency are clear in areas on both sides of the island. The same inversions are involved in these clines on the two sides of the island. Males of silvestris from populations from the north and east side of the island ("Hilo-side") display a novel morphological secondary sexual character. This is absent not only from south and west ("Kona-side") silvestris but also from heteroneura and from the three closely related species endemic to older adjacent islands. In view of the phylogenetic novelty of this evolutionary development, Hilo-side silvestris is judged to be derived from Kona-side rather than vice versa. The character in question involves the addition of about 25 large cilia to the dorsal surface of the tibia of the male. This portio of the leg is used in a very specific fashion to stimulate the female's abdomen during the courtship ritual. Studies of sexual behaviour of individuals drawn from various natural and laboratory populations of silvestris and its relatives have been carried out. Hybrid sterility and/or inviability is lacking in crosses both within and between populations of heterneura and silvestra. An interesting regularity has been widely observed; there is a positive correlation between the phylogenetic age of the population and the degree of discrimination by the female sex in mating. When this principle is applied to silvestris populations, the Kona-side populations of Hualalai volcano are judged to be the oldest in the species. As expected, Hilo-side populations with the novel bristle character appear to be newly-derived...

Animals↗
PubMed1991

Polymorphism at the Adh and alpha Gpdh loci in Drosophila melanogaster: effects of rearing temperature on developmental rate, body weight, and some biochemical parameters.

The role of developmental time in the world-wide cline of Adh and alpha Gpdh allele frequencies of Drosophila melanogaster, and the relationship with weight and some biochemical characters, were investigated. Experimental strains were constructed with different combinations of Adh and alpha Gpdh alleles but with similar genetic background. Developmental time, adult weight, protein-and triglyceride-content, and ADH and alpha GPDH enzyme activity were measured at a rearing temperature of 20, 25 and 29 degrees C. Genotype effects were found in all studied characters. In general the developmental times of genotypes were: AdhFF less than AdhFS less than AdhSS and alpha GpdhFF greater than alpha GpdhFS = alpha GpdhSS. Developmental time and adult weight were strongly affected by rearing temperature. Triglyceride content and ADH and alpha GPDH enzyme activity were slightly affected by temperature. Interactions between genotype and temperature effects were found for developmental rate, adult weight and protein content. No trade off was observed between developmental time on the one hand and adult weight, protein- and triglyceride-content, and ADH and alpha GPDH enzyme activity on the other hand. It is argued that developmental rate differences might be one of the underlying mechanisms of the world-wide cline of the Adh and alpha GPdh allele frequencies.

Alcohol Dehydrogenase↗
PubMed1992

Interaction between the Adh and alpha Gpdh loci in Drosophila melanogaster: adult survival at high temperature.

The role of high temperature resistance in the world-wide cline of Adh and alpha Gpdh allele frequencies of Drosophila melanogaster was investigated. Experimental strains were used with different combinations of Adh and alpha Gpdh alleles but with similar genetic background. The survival time of adult males, reared at different pre-adult temperatures, was measured at 35 degrees C. To investigate the relationship between survival and protein content, triglycerides content and ADH and alpha GPDH enzyme activity, the latter characters were measured before and after 12 h exposure to 35 degrees C. Three-way ANOVA of survival at 35 degrees C showed significant effects of rearing temperature and Adh genotype, interaction between Adh and alpha Gpdh, interaction between Adh and rearing temperature and interaction between Adh, alpha Gpdh and rearing temperature, alpha GPDH enzyme activity did not change significantly. Although protein content, triglycerides content and ADH enzyme activity decreased significantly at 35 degrees C, no correlation was observed between survival and these traits. It is concluded that the world-wide cline of Adh and alpha Gpdh allele frequencies cannot simply be explained by the genotypic differences in resistance to high temperature of adult Drosophila melanogaster.

Alcohol Dehydrogenase↗
PubMed1993

Further studies of a staggered hybrid zone in Mus musculus domesticus (the house mouse).

In the extreme north-east of Scotland (near the village of John o'Groats) there is a small karyotypic race of house mouse (2n = 32), characterized by four metacentric chromosomes 4.10, 9.12, 6.13 and 11.14. We present new data on the hybrid zone between this form and the standard race (2n = 40) and show an association between race and habitat. In a transect south of John o'Groats we demonstrate that the clines for arm combinations 4.10 and 9.12 are staggered relative to the clines for 6.13 and 11.14, confirming previous data collected along an east-west transect (Searle, 1991). There are populations within the John o'Groats-standard hybrid zone dominated by individuals with 36 chromosomes (homozygous for 4.10 and 9.12), which may represent a novel karyotypic form that has arisen within the zone. Alternatively the type with 36 chromosomes may have been the progenitor of the John o'Groats race. Additional cytogenetic interest is provided by the occurrence of a homogeneous staining region on one or both copies of chromosome 1 in some mice from the zone.

Animals↗
PubMed1994

Variation in wing length in Eurasian natural populations of Drosophila melanogaster.

A study of 16 natural populations of Drosophila melanogaster from Eastern Europe, the Caucasus and Central Asia has revealed a cline in wing length associated with geographical position of the populations. Wing length was shown to be positively correlated with temperature. The coefficient of variation in wing length was significantly different in town and orchard populations. The existence of a cline in wing length in the northern part of the species range and in the region where migration must be substantial suggests strong selection pressure acting in natural populations of D. melanogaster.

Animals↗
PubMed2002

The mutation spectrum of hyperphenylalaninaemia in the Republic of Ireland: the population history of the Irish revisited.

Phenylketonuric and hyperphenylalaninaemic patients in the population of the Republic of Ireland were screened for mutations at the human phenylalanine hydroxylase (PAH) locus. A composite data set for the island of Ireland was generated by merging the findings of this study with extant data for Northern Ireland. Analysis of this data on the basis of the four historic provinces (Munster, Leinster, Connacht and Ulster) revealed genetic diversity that is informative in terms of demographic forces that shaped the Irish population. R408W, the predominant Irish PAH mutation associated with haplotype 1.8, reached its highest relative frequency in the most westerly province, Connacht. This suggests that the gradient of R408W-1.8 observed across north-western Europe continues into Ireland and peaks in Connacht. Spatial autocorrelation analysis demonstrated that the gradient is consistent with a localised cline of R408W-1.8 likely to have been established by human migration. This and parallel allele frequency clines may represent the genetic traces of the Palaeolithic colonisation of Europe, a pattern not substantially altered in north-western Europe by subsequent Neolithic migrations. An analysis of mutant allele distributions in Ulster, Scotland and the rest of Ireland confirmed that Ulster has been a zone of considerable admixture between the Irish and Scottish populations, indicating a proportion of Scottish admixture in Ulster approaching 46%. Mutations primarily associated with Scandinavia accounted for 6.1% of mutations overall, illustrating the influence of Viking incursions on Irish population history.

Amino Acid Substitution↗
PubMed2002

Quantitative genetic analysis of natural variation in body size in Drosophila melanogaster.

Latitudinal, genetic variation in body size is a commonly observed phenomenon in many invertebrate species and is shaped by natural selection. In this study, we use a chromosome substitution and a quantitative trait locus (QTL) mapping approach to identify chromosomes and genomic regions associated with adaptive variation in body size in natural populations of Drosophila melanogaster from the extreme ends of clines in South America and Australia. Chromosome substitution revealed the largest effects on chromosome three in both continents, and minor effects on the X and second chromosome. Similarly, QTL analysis of the Australian cline identified QTL with largest effects on the third chromosome, with smaller effects on the second. However, no QTL were found on the X chromosome. We also compared the coincidence of locations of QTL with the locations of five microsatellite loci previously shown to vary clinally in Australia. Permutation tests using both the sum of the LOD scores and the sum distance to nearest QTL peak revealed there were no significant associations between locations of clinal markers and QTL's. The lack of significance may, in part, be due to broad QTL peaks identified in this study. Future studies using higher resolution QTL maps should reveal whether the degree of clinality in microsatellite allele frequencies can be used to identify QTL in traits that vary along an environmental gradient.

Animals↗
PubMed2002

Molecular genecology of temperature response in Lolium perenne: 1. preliminary analysis to reduce false positives.

Molecular genecology is the study of geographical clines in frequencies of molecular markers and their relationship to ecological clines in environmental conditions. This study outlines the principles underlying the selection of populations, focusing on avoiding 'false positives'- noncausal correlations between allele frequency and the environment. The principles are illustrated by identifying a set of populations of Lolium perenne for the study of temperature responses. The selected set of populations encompasses a 20 degrees C range in mean January temperature. Their freezing tolerance shows a linear trend with winter temperature, LT50 decreasing by 0.25 degrees C for each 1 degrees C reduction in mean January temperature.

Altitude↗
PubMed2003

The evolution of extreme shell shape variation in the land snail Ainohelix editha: a phylogeny and hybrid zone analysis.

Ainohelix editha from Hokkaido, Japan, exhibit great geographical variation in their shell morphology. In particular, A. editha in two quite separate locations, Shimamaki and Samani, are striking because they are extremely flat and have a sharp keel, whereas at adjacent sites the shells are globular or depressed-globular. We used mitochondrial 16S rRNA and nuclear ITS-2 sequences to infer a phylogeny among 47 snails from 29 locations. Snails from the two keeled-flat populations clustered separately in the phylogeny, suggesting that this unusual shell form could have evolved independently. A morphological analysis of shells collected along a transect between keeled-flat and globular snail sites showed a cline for shell shape and the angle of the keel. Two different mtDNA lineages were found across the transect, with a cline for an ITS-2 single nucleotide polymorphism. Together, the results may suggest a lack of reproductive isolation between keeled-flat and globular snails, with possible introgression by hybridization.

Animals↗
PubMed2003

Allopatric genetic origins for sympatric host-plant shifts and race formation in Rhagoletis.

Tephritid fruit flies belonging to the Rhagoletis pomonella sibling species complex are controversial because they have been proposed to diverge in sympatry (in the absence of geographic isolation) by shifting and adapting to new host plants. Here, we report evidence suggesting a surprising source of genetic variation contributing to sympatric host shifts for these flies. From DNA sequence data for three nuclear loci and mtDNA, we infer that an ancestral, hawthorn-infesting R. pomonella population became geographically subdivided into Mexican and North American isolates approximately 1.57 million years ago. Episodes of gene flow from Mexico subsequently infused the North American population with inversion polymorphism affecting key diapause traits, forming adaptive clines. Sometime later (perhaps +/-1 million years), diapause variation in the latitudinal clines appears to have aided North American flies in adapting to a variety of plants with differing fruiting times, helping to spawn several new taxa. Thus, important raw genetic material facilitating the adaptive radiation of R. pomonella originated in a different time and place than the proximate ecological host shifts triggering sympatric divergence.

Animals↗
PubMed2002

Wind-dispersed pollen mediates postglacial gene flow among refugia.

A long-term genetic legacy of refugial isolation has been postulated and was demonstrated for maternal refugial lineages for numerous plant and animal species. The lineages were assumed to have remained separated from each other for several glacial periods. The conifer Abies alba Miller, silver fir, is an excellent model to test whether pollen-mediated gene flow may eliminate the genetic imprints of Pleistocene refugial isolation. Two DNA markers with contrasting modes of inheritance were applied to 100 populations covering the entire range of silver fir in Europe. The markers exhibited each two highly conserved alleles based on an insertion/deletion of 80 bp in the fourth intron of the mitochondrial nad5 gene and on a synonymous substitution in the chloroplast psbC gene. The geographical distribution of the maternally inherited mitochondrial variation supported the existence of at least two refugia with two recolonizing maternal lineages remaining largely separated throughout the range. The cline of the nad5 allele frequencies was much steeper than the one of the two psbC alleles. The psbC cline was as wide as the whole range of the species. Our results provide striking evidence that even a species with very long generation times and heavy pollen grains was able to establish a highly efficient pollen-mediated gene flow between refugia. Therefore we postulate that an exchange of genetic information between refugia by range-wide paternal introgression is possible in wind-pollinated plant species.

Abies↗