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At least 217 records · Page 12Linked to original sources
PubMed2006

Molecular evolution of the puroindoline-a, puroindoline-b, and grain softness protein-1 genes in the tribe Triticeae.

The genome organization of the Hardness locus in the tribe Triticeae constitutes an excellent model for studying the mechanisms of evolution that played a role in the preservation and potential functional innovations of duplicate genes. Here we applied the nonsynonymous-synonymous rate ratio (d ( N )/d ( S ) or omega) to measure the selective pressures at the paralogous puroindoline-a (Pina), puroindoline-b (Pinb), and grain softness protein-1 (Gsp-1) genes located at this locus. Puroindolines represent the molecular-genetic basis of grain texture. In addition, the puroindoline gene products have antimicrobial properties with potential role in plant defense. We document the complete coding sequences from the Triticum/Aegilops taxa, rye and barley including the A, D, C, H, M, N, R, S, and U genomes of the Triticeae. Maximum likelihood analyses performed on Bayesian phylogenetic trees showed distinct evolutionary patterns among Pina, Pinb, and Gsp-1. Positive diversifying selection appeared to drive the evolution of at least one of the three genes examined, suggesting that adaptive forces have operated at this locus. Results evidenced positive selection (omega > 4) at Pina and detected amino acid residues along the mature PIN-a protein with a high probability (>95%) of having evolved under adaptation. We hypothesized that positive selection at the Pina region is congruent with its role as a plant defense gene.

Amino Acid Sequence↗
PubMed2003

Body proportions in three Nigerian tribes.

Prediction equations of body composition based on measurements of whole-body bioelectrical impedance analysis (BIA) have been found to be population-specific. It was hypothesised that this may be, in part, due to differences in proportional limb lengths between ethnic or racial groups. As a preliminary to a survey of body composition in urban Nigerians using BIA, the relative limb lengths of the three major tribal groups (Hausa, Yoruba and Ibo) were determined. We found small (5-9%) but significantly longer limb lengths in Nigerians compared to a Caucasian population, but no significant differences between tribes. This implies that BIA prediction equations generated in a Caucasian population are inappropriate for use in a Nigerian population.

Adult↗
PubMed2002

Pollen-pistil relationships and pollen size-number trade-off in species of the tribe Lycieae (Solanaceae).

Pollen volume may be involved in different associations with other floral traits. Particularly, the literature indicates that pollen volume can be implicated in a functional relationship with pistil length, and that it may be affected by a trade-off with pollen number because of the subdivision of limited resources. To assess these associations, pollen volume was subjected to correlation analyses with pollen number and pistil length in 20 Argentinean and Chilean taxa of the monophyletic tribe Lycieae. Depending on the mechanisms operating on pollen size and number, the variability of these traits may be different. Therefore, their coefficients of variation were compared. Pistil length and pollen volume showed a strong positive correlation. In contrast, pollen grain size and number were significantly correlated at neither inter- nor intraspecific levels. Results suggest that pollen size and pistil length may co-evolve. The central role of this interaction is discussed. The lack of a correlated variation in pollen size and number may be related to the similar constraints experienced by the species and/or because constraints are operating at the plant level and not at the species level. Lower variance in pollen size compared with pollen number denotes that pollen size may be the main trait subjected to natural selection.

Journal Article↗
PubMedDate not supplied

Karyotypic relationships among the tribes of Hypostominae (Siluriformes: Loricariidae) with description of XO sex chromosome system in a Neotropical fish species.

The family Loricariidae, with about 683 species, is one the largest fish families in the world. The subfamily Hypostominae was recently reviewed and is now divided in five tribes. With the main objective of contributing to a better understanding of the relationships of the members of the subfamily Hypostominae, cytogenetic analyses were conducted in seven species (three Hypostomini, three Pterygoplichthini and two Ancistrini) from Brazil and Venezuela. In Pterygoplichthini, all species show 2n = 52 chromosomes. In Hypostomini Hypostomus ancistroides has 2n = 68, H. regani 2n = 72 and Hypostomus goyazensis 2n = 72 chromosomes. In Ancistrini Ancistrus n. sp. 1 has 2n = 39/40 with a sex chromosome system of the type XX/X0, which is a novelty for neotropical fishes, and Ancistrus n. sp. 2 has 2n = 52 chromosomes. Six species have single Ag-NORs and two multiple Ag-NORs. The possible cytogenetic relationships among the species of Hypostominae are discussed.

Animals↗
PubMed1993

Dental arch and palate in Taiwan aboriginals--Ami, Bunun, Paiwan and Rukai tribes.

Differences in the dental arch and palate among Taiwan Aboriginals were investigated and compared with Taiwanese and Japanese. Plaster models were taken from 315 Taiwan Aboriginal adults, 185 Taiwanese and 426 Japanese between 1979 and 1989, and various dimensions were measured. There were no clear differences in the characteristics of the dental arch and palate between Taiwan Aboriginal tribes. However, they were found to differ from those of Taiwanese and Japanese. In a dendrogram constructed from a cluster analysis, two major clusters were found. Among males, the first cluster contained Paiwan and Rukai, the second contained Japanese, Taiwanese, Ami and Bunun. Among females, the first contained Japanese, Taiwanese, Rukai and Paiwan, the second contained Ami and Bunun. The Ami were close to Bunun and the Paiwan were close to Rukai among both males and females. These results indicate that Ami and Bunun, and Paiwan and Rukai, respectively, have close affinities.

Adult↗
PubMed1992

HLA polymorphism in a Mataco South American Indian tribe: serology of class I and II antigens. Molecular analysis of class II polymorphic variants.

In the present study, HLA-A, B, C, DR, DQ, and DP loci were analyzed in a group of Mataco Amerindians of Argentina. Using reagents from the 11th International Histocompatibility Workshop (11th IHW), class I specifities such as Bw70, Bw75, and Bw48 were found in this population, other than the HLA determinants commonly described in South American Indians. The class II antigens found were DR4, DRw14, and DRw8 at the DR locus, and DQw4 and DQw7 at the DQ locus. The analysis of DRB1-DR4 related alleles, performed by PCR amplification and oligonucleotide probe hybridization, showed the presence of DRB1*0403, *0404, *0405, and *0411 in individuals from this ethnic group. By the analysis of DRB1-DRw14 related alleles, two variants were found: DRB1*1402 and DRB1*1406, the latter provisionally called DRB1 14.6 in 11th IHW. The DRw8-related allele present was DRB1*0802. The analysis of DRB3 gene revealed only the presence of DRB3*0101 allele in DRw14 individuals. DPB1 locus was also analyzed in unrelated individuals of the same population. Only five DPB1 alleles were found: DPB1*0201, *0301, *0402, *0501, and *1301 over the 19 previously described in the literature. These findings emphasize the restricted HLA class I and II variation observed in this ethnic group as it has been previously shown in other American groups. Some particular haplotypes in this Mataco tribe are described in this work.

Alleles↗
PubMed1988

Longhouse dwelling, social contact and the prevalence of leprosy and tuberculosis among native tribes of Sarawak.

In Sarawak, some tribes stay in communal longhouses whilst others live in villages of single dwellings. The present study looks into the question of whether there is an association between the prevalence of leprosy and tuberculosis with the quantum of social contact that occurs in these two types of settlement patterns. It was found that the prevalence of leprosy and tuberculosis is significantly higher among longhouse dwellers compared with single house dwellers. It was also noted that social groups tended to be larger and to persist for much longer among longhouse dwellers than among those in single dwellings. This lends support to the evidence that social contact in longhouses is more extensive and contributes towards a higher prevalence of leprosy and tuberculosis.

Housing↗
PubMed1979

Duplicate gene expression in tetraploid fishes of the tribe Moxostomatini (Cypriniformes, Catostomidae).

1. Karyotypically tetraploid fishes of the catostomid tribe Moxostomatini were electrophoretically examined to ascertain in the genetic control of 14 enzyme systems (21 loci in dipoid Cypriniformes). 2. The Moxostomatini have become functionally diploid at 50% or more of their loci since the original polyploidization event in the catosomid line. 3. The subgenera Megapharynx and Moxostoma s.s. (genus Moxostoma) are recognized as comprising a single lineage on the basis of synapomorphic diploidization at the G-3-pdh-A locus. 4. Thoburnia s.l. is allied with the genus Hypentelium on the basis of synapomorphic diploidization at the M-Aat-A locus supporting separate generic status for Thorburnia s.l.

Animals↗
PubMed1991

Traditional methods used in the treatment of ophthalmic diseases among the Turkana tribe in north west Kenya.

A survey of traditional methods used in the treatment of ophthalmic diseases was conducted among the Turkana tribe in north-west Kenya. The data was collected from people who suffered from chronic eye diseases. Most of the remedies were prepared from plants and fruits because of their availability in the Turkana region. Some of the other remedies were prepared from animal sources. Most people reported worsening of their eye problems, probably due to improper or unhygienic applications. The collected data can be an example of use of traditional eye treatment in remote African arid and semi-arid areas.

Eye Diseases↗
PubMed2004

A novel glutamate-dependent acid resistance among strains belonging to the Proteeae tribe of Enterobacteriaceae.

Morganella, Providencia and Proteus strains were capable of surviving pH 2.0 for 1 h if glutamate was present. These strains did not have glutamic acid decarboxylase activity and the gadAB genes were not detected in any of these bacteria. When exposed to pH 2.0 acid shocks, the survival rate of these bacteria was significantly increased with glutamate concentrations as low as 0.3 mM in the acid media. Escherichia coli cells incubated at pH 3.4 consumed four times more glutamate and produced at least 7-fold more gamma-amino butyric acid than Morganella, Providencia and Proteus strains. These results indicate that strains belonging to the Proteeae tribe might have novel glutamate dependent acid-resistance mechanisms.

Enterobacteriaceae↗
PubMed2005

Antidiabetic plants used by Sikkim and Darjeeling Himalayan tribes, India.

Sikkim and Darjeeling Himalayan region is characterized by a rich floral diversity and an equally rich ethnomedicinal tradition. Herbal medicine is the dominant system of medicine practiced by the local tribes of this region for the treatment of diabetes. During the course of the present studies it was found that 37 species of plants belonging to 28 families are used as antidiabetic agents in the folk medicinal practices in the region and 81% of these plants are hitherto unreported as hypoglycemic agents. This finding may lead to serious research towards developing new and efficient drugs for diabetes.

Diabetes Mellitus, Type 1↗
PubMed2005

Indigenous phytotherapy for genito-urinary diseases used by the Kandha tribe of Orissa, India.

Studies on ethnomedicobotany of Kandha tribe of Orissa, India, are scanty. In view of this the original ethno-botanical information and plant specimens were collected from the Kandhamal district of Orissa by visiting the area several times. The paper reports 27 plant species belonging to 24 families used in the treatment of 17 diseases under the broad heading genito-urinary diseases by the Kandhas of Orissa. The use of these plants does not necessarily imply efficacy, but it does give a list of species that can be studied pharmacologically for its active principles and bioactive effect.

Adult↗
PubMed2006

Responses of antennal campaniform sensilla to rapid temperature changes in ground beetles of the tribe platynini with different habitat preferences and daily activity rhythms.

Responses of temperature sensitive (cold) cells from the antenna of ground beetles (tribe Platynini) were compared in species with different ecological preferences and daily activity rhythms. Action potential rates were characterized at various temperatures (ranges 23-39 degrees C) and during rapid changes in it (Deltat=0.5-15 degrees C). The stationary firing frequencies were nearly twice as high in eurythermic open field ground beetles Agonum muelleri and Anchomenus dorsalis (firing rates ranging from 22 to 47imp/s) than in a stenothermic forest species Platynus assimilis. In the eurythermic species, the firing rate did not significantly depend on temperature (Anchomenus dorsalis range of 23-27 degrees C and Agonum muelleri range of 23-33 degrees C) but plots of firing rate versus temperature showed rapid declines when lethally high temperatures were approached. In contrast, a nearly linear decline of the firing rate/temperature curve was observed in Platynus assimilis. Responses to rapid temperature decreases were also considerably higher in eurythermic species. Both the peak frequency of the initial burst (maximum 420-650Hz) as well as the sustained discharge in the first 4s of the response were higher than in Platynus assimilis. Long silent periods, lasting up to several seconds, that occurred at the beginning of the response to rapid warming were significantly shorter in Agonum muelleri and Anchomenus dorsalis compared to Platynus assimilis. These findings suggest that the responses of thermoreceptors to temperature changes may be correlated with specific ecological preferences.

Animals↗
PubMed2006

Evolution of active host-attraction strategies in the freshwater mussel tribe Lampsilini (Bivalvia: Unionidae).

Most freshwater mussels (Bivalvia: Unionoida) require a host, usually a fish, to complete their life cycle. Most species of mussels show adaptations that increase the chances of glochidia larvae contacting a host. We investigated the evolutionary relationships of the freshwater mussel tribe Lampsilini including 49 of the approximately 100 extant species including 21 of the 24 recognized genera. Mitochondrial DNA sequence data (COI, 16S, and ND1) were used to create a molecular phylogeny for these species. Parsimony and Bayesian likelihood topologies revealed that the use of an active lure arose early in the evolution of the Lampsiline mussels. The mantle flap lure appears to have been the first to evolve with other lure types being derived from this condition. Apparently, lures were lost independently in several clades. Hypotheses are discussed as to how some of these lure strategies may have evolved in response to host fish prey preferences.

Animals↗
PubMed2002

Chemotaxonomy of the tribe Antidesmeae (Euphorbiaceae): antidesmone and related compounds.

Selected species of the tribe Antidesmeae (Euphorbiaceae, subfamily Phyllanthoideae) have been screened for antidesmone occurrence and its content by quantitative HPLC (UV) and qualitative LC-MS/MS analysis. The LC-MS analysis allowing the additional detection of 17,18-bis-nor-antidesmone, 18-nor-antidesmone, 8-dihydroantidesmone and 8-deoxoantidesmone was carried out in the selected reaction monitoring (SRM) mode. Leaf material from herbarium specimens of 13 Antidesma spp., Hyeronima alchorneoides and Thecacoris stenopetala (all subtribe Antidesminae), as well as Maesobotrya barteri, Aporosa octandra (both Scepinae) and Uapaca robynsii (Uapacinae) were analysed. Additionally, freshly collected samples of different plant parts of two Antidesma spp. were investigated to ensure the significance of the results on herbarium specimens and to compare the antidesmone content in bark, root and leaves. Antidesmone could be unambiguously identified in 12 of 13 Antidesma spp., as well as in the two other investigated genera of subtribe Antidesminae, in levels of up to 65 mg/kg plant dry weight. Antidesmone was not found in specimens from other subtribes. Antidesmone-derived compounds occur in much lower concentrations than antidesmone.

Alkaloids↗
PubMed1999

Evolution of HLA-class I compared to HLA-class II polymorphism in Terena, a South-American Indian tribe.

We have studied the HLA alleles of 60 unrelated healthy Terena and 10 Terena families. They are members of an isolated Brazilian tribe located in Mato Grosso do Sul (South Central Brazil). Six novel alleles were found in this population: HLA-A*0219 (gf = 0.02), A*0222 (gf = 0.15), HLA-B* 3520 (gf = 0.01), B*3521 (gf = 0.03), B*3912 (gf = 0.03) and B*4803 (gf = 0.16). Five of the six novel alleles differ from their putative progenitors by amino acid replacements in residues that contribute to the pockets of the peptide-binding site. Many of the variants defined by molecular methods were not identified correctly by serological typing. We calculated heterozygosity values (H) for HLA-A, -B, -C, DRB1, DQB1 and DPB . The highest values were observed at the HLA-B locus, followed by HLA-A, -DRB1 and DQB1. Residue positions 9, 24, 45, 62, 67, 95, 114, 116, 156, and 163 of HLA class I showed heterozygosity values greater than 0.50. Nine of them contribute to the peptide-binding specificity pockets and one to the T cell receptor binding site. If HLA antigens are useful for defense against pathogenic agents, heterozygosity would offer an advantage by allowing binding of a larger repertoire of peptides to the class I molecules. Individuals that are heterozygous at these positions would probably have a wider repertoire of peptide presentation to T cells. The observed results including the presence of novel alleles in the class I HLA loci suggest a functionally significant, more rapid evolution of class I compared to class II loci in this South American isolated population.

Alleles↗
PubMed1998

Native phytotherapy among the Raute tribes of Dadeldhura district, Nepal.

The herbal drugs used by the Raute tribe of far-western Nepal are discussed. A total of 47 species of plants including one species of pteridophyte, four monocotyledons and 42 dicotyledons, and 17 types of diseases treated, have been identified from this study. Medicinal uses of 15 species (31%) are unrecorded from other parts of the country.

Female↗
PubMed1997

Effects of inbreeding on reproductive losses in Kota tribe.

Sanghvi's hypothesis on long term effects of inbreeding was tested in Kotas. Kota is a numerically small tribal population in the Nilgiri district, Tamil Nadu State, India. Consanguineous marriages are common in this tribe. A total of 95 couples were taken for this study and necessary data were collected on a set proforma. Of the 95 couples, 28 (29.5%) were consanguineously related. The inbreeding coefficient for autosomal genes is 0.022 and for sex-linked genes is 0.03. Inbreeding effects on reproductive losses were examined through an exponential regression model. Although the regression coefficient B values are positive, they are insignificant, suggesting no consistent relationship between degree of consanguinity and the reproductive losses. The estimates of genetic load is 1.8 lethal equivalents per gamete and the average B/A ratio is 5. These findings empirically support the Sanghvi's contention.

Ethnicity↗