Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “Maps as Topic”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 217 records · Page 12Linked to original sources

Effects of the choice of age-adjustment method on maps of death rates.

Maps of morbidity or mortality rates, whether considered individually or as a layer in a geographic information system application, invite multiple comparisons of area rates. However, comparisons of rates across different populations require standardization of the age-specific rates to account for differences in population age structures. The indirect standardization method, or equivalently the standardized mortality ratio (SMR), has been recommended for small areas where age-specific rates can be quite variable. Although theoretically equivalent to directly adjusted rates under the assumption of independent age and area effects, indirect summary measures are not comparable across areas when this assumption is violated. We tested the validity of this assumption for the 10 most common causes of death in the United States during 1980-84 and examined the geographic clustering apparent when categorized death rates, adjusted by different methods, are presented as thematic maps. Although overall agreement between the methods was good (rank correlation coefficient > 82 per cent for each cause), when the adjusted rates were classified into quintiles 18 per cent of the states fell into different categories depending on the method of adjustment. Using an internal standard for the indirect method reduced this discrepancy to 4.9 per cent. However, both traditional chi-square tests and a generalized logistic spline model identified significant interactions between age and area for each cause of death, a violation of the assumption required for equivalence of the methods. Potential variation in geographic inferences is illustrated by maps of direct and indirect rates and an empirical Bayes posterior mean, which is a function of these traditionally adjusted rates. Based on these results, we recommend the direct age-adjustment method for rate maps.

Adolescent↗

Designing linked micromap plots for states with many counties.

This paper describes the design of linked micromap plots for showing county estimates on a state by state basis. The linked micromap template was specifically developed to represent spatially indexed statistical summaries. Each plot shows regional names, spatial patterns and statistical patterns while linking them all together. Thus the design is useful for communicating summaries from a host of health and environmental studies. The specific design challenge in this paper is to create one-page plots for the states with 60 to 120 counties. While the county names and micromaps take up substantial space, the three examples demonstrate that there is sufficient space to represent two variables. The basic design has the potential for showing more. Consequently the new designs are suitable for presenting sophisticated summaries.

Adolescent↗

Use of a density equalizing map projection in analysing childhood cancer in four California counties.

In this study, 401 cases of childhood cancer in four California counties in 1980-1988 were analysed with the innovative methodology of density equalizing map projections. The data were originally collected and analysed by the California State Department of Health Services (DHS). In addition to the new analytic technique, the present analysis used population data more detailed and more accurate than those in the DHS analysis. The geographic boundaries of the 259 census tracts in the study area were adjusted according to population at risk so as to make population density everywhere constant; then the 401 case locations were plotted on the density equalized map. If risk is everywhere equal, the resulting distribution of cases should be uniform except for statistical variation. The metric used was a measure of the variability of the density of cases on the density equalized map. The same metric was calculated for independent samples of artificial cases, generated under the null hypothesis of equal risk. The slight geographic non-uniformity observed among the real cases is well within the limits of variation observed in the samples of artificial cases. In agreement with results published by DHS, we conclude that there is no evidence for geographic variation of risk among the cases studied. Subsets of the data, selected by age, sex, race, time period and cancer site, yielded similar negative results.

Adolescent↗

Level-dependent representation of stimulus frequency in cat primary auditory cortex.

The tonotopicity of the cat's primary auditory cortex (AI) is thought to provide the framework for frequency-specific processing in that field. This study was designed to assess this postulate by examining the spatial distribution of neurons within AI that are activated by a single tonal frequency delivered to the contralateral ear. Distributions obtained at each of several stimulus levels were then compared to assess the influence of stimulus amplitude on the spatial representation of a given stimulus frequency in AI. Data were obtained from 308 single units in AI of four adult, barbiturate-anesthetized cats, using extracellular recording methods. Stimuli were 40-ms tone pulses presented through calibrated, sealed stimulating systems. In each animal, the CF (stimulus frequency to which the unit is most sensitive), threshold at CF, response/level function at CF, and binaural interactions were determined for isolated neurons (usually one per track) in 60-90 electrode tracks. For each unit, regardless of its CF, responses to 40 repetitions of contralateral tones of a single frequency, presented at each of four or five sound pressure levels (SPLs) in the range from 10 to 80 dB were obtained. Different test frequencies were used in each of four cats (1.6, 8.0, 11.0, and 16.0 kHz). For tones of each SPL, we generated maps of the response rates across the cortical surface. These maps were then superimposed on the more traditional maps of threshold CF. All units whose CF was equal to the test frequency could be driven at some SPL, given an appropriate monaural or binaural configuration of the stimulus. There was a clear spatial segregation of neurons according to the shapes of their CF tone response/level functions. Patches of cortex, often occupying more than 2 mm2, seemed to contain only monotonic or only nonmonotonic units. In three cortices, a patch of nonmonotonic cells was bounded ventrally by a patch of monotonic cells, and in one of these cases, a second patch of monotonic cells was found dorsal to the nonmonotonic patch. Contralateral tones of any given SPL evoked excitatory responses in discontinuous cortical territories. At low SPLs (10, 20 dB), small foci of activity occurred along the isofrequency line representing the test frequency. Many of these cells had nonmonotonic response/level functions. (ABSTRACT TRUNCATED AT 400 WORDS)

Animals↗

Early maps as stepping stones for the reconstruction of historic ecological conditions and biota.

We reconstructed the flora of a European region at a historical point in time from historical topographical maps that contain rather precise information about the condition and composition of habitats. The ecological information obtained from these maps can be enriched through the potential of broadly diversified archival information. This study is confined to grassland communities. Considerations in terms of phytosociology make historical lists of plant species a good starting point for the reconstruction of grassland communities. The combination of historical and scientific methods proves suitable for reconstructing specific historical environmental conditions. Taking into account the frequency of relevant historical sources in European archives as well as in archives abroad, this approach claims for far-reaching application to ecosystem restoration matters, especially if ecological information from natural sources is missing.

Biodiversity↗

Akaike's information criterion for a measure of linkage disequilibrium.

The extent and distribution of linkage disequilibrium ( LD) in humans is a current topic especially for gene mapping of complex diseases. Akaike's information criterion ( AIC) was applied to estimate LD and compared with other standard LD measures, D' and r(2). By comparison of an independent model (IM; linkage equilibrium) and a dependent model (DM; linkage disequilibrium), the parsimonious model is the one with the smaller AIC score. Therefore, the extent of LD by AIC is expressed as AIC( IM) -- AIC( DM)( AIC( LD)). A total of 39 single-nucleotide polymorphisms on a 1.6-Mb region of chromosome 21 q22 were identified, and genotyped in 192 Japanese individuals. All possible pairs were analyzed to estimate LD and the analyses were compared. AIC( LD) became highly positive as the D' value increased and was negative at D' values of around 0.2. Because a negative value of AIC( LD) implies linkage equilibrium, D' values below 0.2 should be regarded as linkage equilibrium. The LD estimate by AIC yielded results similar to those obtained by r(2), indicating that AIC( LD) would be useful for fine gene mapping.

Algorithms↗

Mapping turbidity in the Charles River, Boston using a high-resolution satellite.

The usability of high-resolution satellite imagery for estimating spatial water quality patterns in urban water bodies is evaluated using turbidity in the lower Charles River, Boston as a case study. Water turbidity was surveyed using a boat-mounted optical sensor (YSI) at 5 m spatial resolution, resulting in about 4,000 data points. The ground data were collected coincidently with a satellite imagery acquisition (IKONOS), which consists of multispectral (R, G, B) reflectance at 1 m resolution. The original correlation between the raw ground and satellite data was poor (R2 = 0.05). Ground data were processed by removing points affected by contamination (e.g., sensor encounters a particle floc), which were identified visually. Also, the ground data were corrected for the memory effect introduced by the sensor's protective casing using an analytical model. Satellite data were processed to remove pixels affected by permanent non-water features (e.g., shoreline). In addition, water pixels within a certain buffer distance from permanent non-water features were removed due to contamination by the adjacency effect. To determine the appropriate buffer distance, a procedure that explicitly considers the distance of pixels to the permanent non-water features was applied. Two automatic methods for removing the effect of temporary non-water features (e.g., boats) were investigated, including (1) creating a water-only mask based on an unsupervised classification and (2) removing (filling) all local maxima in reflectance. After the various processing steps, the correlation between the ground and satellite data was significantly better (R2 = 0.70). The correlation was applied to the satellite image to develop a map of turbidity in the lower Charles River, which reveals large-scale patterns in water clarity. However, the adjacency effect prevented the application of this method to near-shore areas, where high-resolution patterns were expected (e.g., outfall plumes).

Boston↗

Estimates of birth prevalence rates of spina bifida in the United States from computer-generated maps.

A computer-generated mapping procedure was developed to estimate geographic and race-specific birth prevalence rates of open spina bifida. The estimates are based on birth certificate data adjusted for underascertainment. Separate maps were produced for white births and black births. For both races there is a general decreasing rate of spina bifida from east to west. The highest rates are eight per 10,000 total births for whites in Southern Appalachia, and the lowest rates are less than one per 10,000 for blacks in the Rocky Mountain states and the Pacific Northwest. Until more exact data are available, these maps represent the best current available data on racial and geographic birth prevalence rates in the United States. They are useful for program planning and as an aid in interpreting maternal serum alpha-fetoprotein levels to detect neural tube defects.

Black or African American↗