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PubMed2004

History of human parasitic diseases.

Humans are afflicted by a number of diseases caused by parasitic protozoa and helminth worms. The first records of these ancient associations come from studies on archeologic material and the writings of the Greek, Egyptian, and Roman empires but it was not until the theory of spontaneous generation had been disproved in the nineteenth century that it became possible to incriminate parasites in the etiologies of a number of diseases that had hitherto been enigmatic. The golden age of parasitology was the nineteenth century when most of the life cycles of parasites were accurately described for the first time. The history of parasitology is not yet complete and new diseases are still being discovered.

History, 15th Century↗
PubMed2004

Is the incidence of elbow osteoarthritis underestimated? Insights from paleopathology.

OBJECTIVES: Osteoarthritis is uncommon at the elbow in contemporary populations. We sought to determine whether this was also the case in medieval and premodern times. MATERIAL AND METHODS: Standard criteria for osteoarthritis were applied to 496 complete elbows from a necropolis in Provence, France. RESULTS: Osteoarthritis was found in 27% of elbows. Significant differences were noted across periods and age groups but not between the right and left sides. CONCLUSION: Our data suggest that the symptoms of elbow osteoarthritis may be far milder than expected from the underlying pathological lesions. The incidence of elbow osteoarthritis in contemporary populations is probably underestimated. The high prevalence of elbow osteoarthritis in archeological populations cannot be taken as a marker for activities placing stress on the upper limbs.

Adult↗
PubMed2003

Later Middle Pleistocene human remains from the Almonda Karstic system, Torres Novas, Portugal.

Later Middle Pleistocene archeological deposits of the Galeria Pesada (Gruta da Aroeira), Almonda Karstic System, Torres Novas, Portugal, yielded two archaic human teeth, a mandibular canine and a maxillary third molar. The C(1)presents moderate and asymmetrical shoveling with a stout root. The slightly worn M(3)exhibits at least four cusps with a large hypocone, three roots with large radicular plates, and an absence of taurodontism. They are moderately large for later Middle Pleistocene humans in their buccolingual crown diameters, although the M(3)mesiodistal diameter is modest. The C(1)exhibits labial calculus and multiple linear hypoplastic defects, but the M(3)is lesion free. Both teeth are morphologically similar to those of other Middle Pleistocene European humans and reinforce a pattern of dental hypertrophy among these archaic Homo.

Animals↗
PubMed2005

Damage and repair of ancient DNA.

Under certain conditions small amounts of DNA can survive for long periods of time and can be used as polymerase chain reaction (PCR) substrates for the study of phylogenetic relationships and population genetics of extinct plants and animals, including hominids. Because of extensive DNA degradation, these studies are limited to species that lived within the past 10(4)-10(5) years (Late Pleistocene), although DNA sequences from 10(6) years have been reported. Ancient DNA (aDNA) has been used to study phylogenetic relationships of protists, fungi, algae, plants, and higher eukaryotes such as extinct horses, cave bears, the marsupial wolf, the moa, and Neanderthal. In the past few years, this technology has been extended to the study of infectious disease in ancient Egyptian and South American mummies, the dietary habits of ancient animals, and agricultural practices and population dynamics of early native Americans. Hence, ancient DNA contains information pertinent to numerous fields of study including evolution, population genetics, ecology, climatology, medicine, archeology, and behavior. The major obstacles to the study of aDNA are its extremely low yield, contamination with modern DNA, and extensive degradation. In the course of this review, we will discuss the current aDNA literature describing the importance of aDNA studies as they relate to important biological questions and the difficulties associated with extracting useful information from highly degraded and damaged substrates derived from limited sources. In addition, we will present some of our own preliminary and published data on mechanisms of DNA degradation and some speculative thoughts on strategies for repair and restoration of aDNA.

DNA↗
PubMed2004

Baleen as a biomonitor of mercury content and dietary history of North Atlantic minke whales (Balaenopetra acutorostrata): combining elemental and stable isotope approaches.

Baleen is an incrementally-growing tissue of balaenopteran whales which preserves relatively well over time in museums and some archeological sites, and, therefore might be useful for studies examining long-term changes of metal levels in whales. This study examined Hg and stable C and N isotopic composition of baleen plates of the North Atlantic minke whale (Balaenoptera acutorostrata), which continues to be a food source for people in Greenland and elsewhere. We compared the Hg levels and stable isotopes of major tissues (kidney, liver and muscle) with those of baleen plates to see whether baleen could be used as a biomonitor of variations of Hg intake and diet both between individuals and within individuals over time. Mercury was significantly correlated with concentrations in all tissues (kidney, liver and muscle). Stable C and N isotopes in baleen were generally similar to those of muscle, which reflects the recent (approximately one month) feeding of the whale, but in some individuals there were significant differences between baleen and muscle. Sectioning of baleen into 1 cm longitudinal increments showed that these differences were due to marked dietary shifts by some individuals over time that had been recorded in the baleen but were lost from the muscle record. Whole baleen C and N isotopes were better correlated with tissue Hg levels, suggesting that baleen may provide a more reliable indicator of long-term average diet, which in turn may be better related to Hg accumulation in tissues than the shorter-term diet record contained in muscle.

Animals↗
PubMed2005

Persistent organic pollutants and mercury in marine biota of the Canadian Arctic: an overview of spatial and temporal trends.

This review summarizes and synthesizes the significant amount of data which was generated on mercury (Hg) and persistent organic pollutants (POPs) in Canadian Arctic marine biota since the first Canadian Arctic Contaminants Assessment Report (CACAR) was published in 1997. This recent body of work has led to a better understanding of the current levels and spatial and temporal trends of contaminants in biota, including the marine food species that northern peoples traditionally consume. Compared to other circumpolar countries, concentrations of many organochlorines (OCs) in Canadian Arctic marine biota are generally lower than in the European Arctic and eastern Greenland but are higher than in Alaska, whereas Hg concentrations are substantially higher in Canada than elsewhere. Spatial coverage of OCs in ringed seals, beluga and seabirds remains a strength of the Arctic contaminant data set for Canada. Concentrations of OCs in marine mammals and seabirds remain fairly consistent across the Canadian Arctic although subtle differences from west to east and south to north are found in the proportions of various chemicals. The most significant development since 1997 is improvement in the temporal trend data sets, thanks to the use of archived tissue samples from the 1970s and 1980s, long-term studies using archeological material, as well as the continuation of sampling. These data cover a range of species and chemicals and also include retrospective studies on new chemicals such as polybrominated diphenyl ethers. There is solid evidence in a few species (beluga, polar bear, blue mussels) that Hg at some locations has significantly increased from pre-industrial times to the present; however, the temporal trends of Hg over the past 20-30 years are inconsistent. Some animal populations exhibited significant increases in Hg whereas others did not. Therefore, it is currently not possible to determine if anthropogenic Hg is generally increasing in Canadian Arctic biota. It is also not yet possible to evaluate whether the recent Hg increases observed in some biota may be due solely to increased anthropogenic inputs or are in part the product of environmental change, e.g., climate warming. Concentrations of most "legacy" OCs (PCBs, DDT, etc.) significantly declined in Canadian Arctic biota from the 1970s to the late 1990s, and today are generally less than half the levels of the 1970s, particularly in seabirds and ringed seals. Chlorobenzenes and endosulfan were among the few OCs to show increases during this period while summation operatorHCH remained relatively constant in most species. A suite of new-use chemicals previously unreported in Arctic biota (e.g., polybrominated diphenyl ethers (PBDEs), short chain chlorinated paraffins (SCCPs), polychlorinated naphthalenes (PCNs), perfluoro-octane sulfonic acid (PFOS) and perfluorocarboxylic acids (PFCAs)) has recently been found, but there is insufficient information to assess species differences, spatial patterns or food web dynamics for these compounds. Concentrations of these new chemicals are generally lower than legacy OCs, but there is concern because some are rapidly increasing in concentration (e.g., PBDEs), while others such as PFOS have unique toxicological properties, and some were not expected to be found in the Arctic because of their supposedly low potential for long-range transport. Continuing temporal monitoring of POPs and Hg in a variety of marine biota must be a priority.

Animals↗
PubMed2006

[Paleoparasitology: host-parasite relationship in a historical and paleoenvironmenal context].

Paleoparasitology of the ancient world has mainly concerned the study of latrine sediments, coprolites collected from mummified bodies or archeological strata, mostly preserved by natural conditions. The well-preserved conditions of helminth eggs have allowed paleoepideological approaches and application of immunological techniques for the detection of protozoan palaeoantigens.

Animals↗
PubMed1975

The radiology of excavated Saxon and medieval human remains from Winchester.

Radiography of many of the human bones discovered during the archeological excavations at Winchester has been an integral part of the study of the Saxon and medieval populations found there. Thus, a radiological study of bone pathology in successive populations from a single site spanning a period of 600 years is presented.

Age Determination by Skeleton↗
PubMed2003

Investigation of natural dyes occurring in historical Coptic textiles by high-performance liquid chromatography with UV-Vis and mass spectrometric detection.

Liquid chromatography (LC) combined with ultraviolet-visible (UV-Vis) and mass spectrometric (MS) detection was utilized to study the chemical components present in extracts of natural dyes originating from fiber samples obtained from Coptic textiles from Early Christian Art Collection of National Museum in Warsaw. Chromatographic retention, ionization, UV-Vis and mass spectra of twenty selected dye compounds of flavanoid-, anthraquinone- and indigo-types were studied. Most of the investigated compounds could be ionized by positive and negative ion electrospray ionization. Difficulties with the ionization by electrospray were experienced for indigotin and brominated indigotins, but these were ionized by atmospheric pressure chemical ionization. Mass spectrometric detection, utilizing different scanning modes of a triple quadrupole mass spectrometer, combined with the UV-Vis detection was demonstrated to be a powerful approach to detection and identification of dyes in the extracts of archeological textiles. Using this approach the following compounds were identified in the extracts of Coptic textiles: luteolin, apigenin, rhamnetin, kaempferol, alizarin, purpurin, xanthopurpurin, monochloroalizarin, indirubin, and so the type of dye that was utilized to dye the textiles could be identified. Detection capabilities for several dye-type analytes were compared for the UV-Vis and mass spectrometric detection. The signal-to-noise ratios obtained for luteolin, apigenin, and rhamnetin were higher for the MS detection for most of the examined sample extracts. Purpurin, alizarin, and indirubin showed similar signal-to-noise ratios for UV-Vis and mass spectrometric detection.

Art↗
PubMed2003

Morphological affinities of the Australopithecus afarensis hand on the basis of manual proportions and relative thumb length.

The hands of apes and humans differ considerably with regard to proportions between several bones. Of critical significance is the long thumb relative to other fingers, which is the basis for human-like pad-to-pad precision grip capability, and has been considered by some as evidence of tool-making. The nature and timing of the evolutionary transition from ape-like to human-like manual proportions, however, have remained unclear as a result of the lack of appropriate fossil material. In this article, the manual proportions of Australopithecus afarensis from locality AL 333/333w (Hadar, Ethiopia) are investigated by means of bivariate and multivariate morphometric analyses, in order to test the hypothesis that human-like proportions, including an enhanced thumb/hand relationship, originally evolved as an adaptation to stone tool-making. Although some evidence for human-like manual proportions had been previously proposed for this taxon, conclusive evidence was lacking. Our results indicate that A. afarensis possessed overall manual proportions, including an increased thumb/hand relationship that, contrary to previous reports, is fully human and would have permitted pad-to-pad human-like precision grip capability. We show that these human-like proportions in A. afarensis mainly result from hand shortening, as in modern humans, and that these conclusions are robust enough as to be non-dependent on whether the bones belong to a single individual or not. Since A. afarensis predates the appearance of stone tools in the archeological record, the above-mentioned conclusions permit a confident refutation of the null hypothesis that human-like manual proportions are an adaptation to stone tool-making, and thus alternative explanations must be therefore sought. One hypothesis would consider manipulative behaviors (including tool-use and/or non-lithic tool-making) in early hominines exceeding those reported among extant non-human primates. Alternatively, on the basis of the many adaptations to committed bipedalism in A. afarensis, we propose the hypothesis that once arboreal behaviors became adaptively insignificant and forelimb-dominated locomotor selection pressures were relaxed with the adoption of terrestrial bipedalism, human-like manual proportions could have merely evolved as a result of the complex manipulation selection pressures already present in extant non-human primates. Both hypotheses are not mutually exclusive, and even other factors such as pleiotropy cannot be currently discarded.

Adult↗
PubMed2001

Tumor suppressor genes: at the crossroads of molecular carcinogenesis, molecular epidemiology and human risk assessment.

The p53 tumor suppressor gene is mutated in about half of all human cancer cases. The p53 protein modulates multiple cellular functions, such as gene transcription, DNA synthesis and repair, cell cycle arrest, senescence, and apoptosis. Mutations in the p53 gene can abrogate these functions and may lead to genetic instability and progress to cancer. The molecular archeology of the p53 mutation spectrum generates hypotheses concerning the etiology and molecular pathogenesis of cancer. The spectrum of somatic mutations in the p53 gene implicates environmental carcinogens and endogenous processes in the etiology of human cancer. The presence of a characteristic p53 mutation also can manifest a molecular link between exposure to a particular carcinogen and a specific type of human cancer, e.g. aflatoxin B1 (AFB1) exposure and codon 249ser mutations in hepatocellular carcinoma, ultraviolet (UV) exposure and CC to TT tandem mutations in skin cancer, and cigarette smoke and the prevalence of G to T transversions in lung cancer. Although several different exogenous carcinogens have been shown to selectively target p53, evidence supporting the endogenous insult of p53 from oxyradical and nitrogen-oxyradicals is accumulating. p53 mutations can be a biomarker of carcinogen effect. Determining the characteristic p53 mutation load in nontumorous tissue, with a highly sensitive mutation assay, can indicate a specific carcinogen exposure and also may help in identifying individuals at an increased risk of cancer.

Carcinogens↗
PubMed2000

Application of risk assessment and decision analysis to the evaluation, ranking and selection of environmental remediation alternatives.

A single framework integrating risk assessment and decision analysis methods for evaluating, ranking and selecting preferred remediation alternatives at a contaminated site was developed and demonstrated. The methodology used relies on stakeholder inputs throughout the entire process and employs those inputs to combine the results of multiple risk assessments to arrive at a total impact for each remediation alternative. The total impact values allow the ranking of the alternatives, which in turn, serves as the basis for deliberations among the stakeholders in order to identify the preferred alternative. Six major risk or impact categories were considered in the evaluation of the alternatives: human health and safety, environmental protection, life cycle cost, socio-economics, cultural, archeological and historical resources, and programmatic assumptions.

Decision Making↗
PubMed1990

The technique of polymerase chain reaction--a new diagnostic tool in microbiology and other scientific fields (review).

The polymerase chain reaction, a method of so far unknown sensitivity and specificity, is about to become an important diagnostic tool in microbiology. Practically even a single bacterium, virus particle, or parasite can be detected by it. Furthermore, this technique has been used with highly promising results in other scientific fields like genetics, forensic medicine and archeology. This article reviews technical aspects and variations of this new technique.

Animals↗
PubMed2000

ESR dating of a toxodon tooth from a Brazilian karstic cave.

A pre-molar of a Toxodon platensis (sp), a large mammal that inhabited the forests of Southeast Brazil during quaternary times, was dated by electron spin resonance (ESR). Enamel and dentine were separated giving, the following archeological doses (AD): (4.0+/-0.8) and (11+/-2) Gy, respectively. This difference was explained by the higher content of Uranium in dentine (25.1+/-0.3) ppm as compared to enamel (0.37+/-0.03) ppm. Taking account of the internal dose contribution to the AD, the age obtained is (6.7+/-1.3) ky BP for dentine and (5.0+/-1.6) ky BP for enamel.

Animals↗
PubMed1997

Rudolf Virchow, not just a pathologist: a re-examination of the report on the typhus epidemic in Upper Silesia.

Rudolf Virchow (1821-1902) is mainly remembered as the "father" of cellular pathology; however, he was not just a pathologist. His contributions to anthropology, archeology, ethnography, and history, as well as his involvement in epidemiology, public health, and politics, portray a man with multiple interests, deeply engaged in the controversies of his time. In his Report on the Typhus Epidemics of Upper Silesia of 1848, the young Virchow reveals himself to be a self-assured pathologist, although his postmortem examinations failed to shed much light on typhus. Despite of his shortcomings and biases, Virchow's genius is revealed in his deep appreciation of the importance of the total physical, socio-cultural, economic, and political background of epidemic diseases. One can discern in the Report the making of Virchow, the politician and statesman who will contribute to the modernization of Germany's public health, and of the physician-scholar and physician-citizen who, despite of his shortcomings and militancy, continues to inspire and challenge us today.

Disease Outbreaks↗
PubMed1999

Animal v. plant foods in human diets and health: is the historical record unequivocal?

An ideal diet is one that promotes optimal health and longevity. Throughout history, human societies have developed varieties of dietary patterns based on available food plants and animals that successfully supported growth and reproduction. As economies changed from scarcity to abundance, principal diet-related diseases have shifted from nutrient deficiencies to chronic diseases related to dietary excesses. This shift has led to increasing scientific consensus that eating more plant foods but fewer animal foods would best promote health. This consensus is based on research relating dietary factors to chronic disease risks, and to observations of exceptionally low chronic disease rates among people consuming vegetarian, Mediterranean and Asian diets. One challenge to this consensus is the idea that palaeolithic man consumed more meat than currently recommended, and that this pattern is genetically determined. If such exists, a genetic basis for ideal proportions of plant or animal foods is difficult to determine; hominoid primates are largely vegetarian, current hunter-gatherer groups rely on foods that can be obtained most conveniently, and the archeological record is insufficient to determine whether plants or animals predominated. Most evidence suggests that a shift to largely plant-based diets would reduce chronic disease risks among industrialized and rapidly-industrializing populations. The accomplish this shift, it will be necessary to overcome market-place barriers and to develop new policies that will encourage greater consumption of fruits, vegetables and grains as a means to promote public health.

Animals↗
PubMed2003

Compound-specific carbon isotope analysis of volatile organic compounds in the low-microgram per liter range.

Compound-specific carbon isotope analysis (CSIA) has become an important tool in biological, archeological, and geological studies as well as in forensics, food sciences, and organic chemistry. If sensitivity could be enhanced, CSIA would further have an improved potential for environmental applications such as, for example, in situ remediation studies to assess contaminated environments, identification of pollutant degradation pathways and kinetics, distinction between degradation/formation mechanisms, or, verification of contaminant sources. With this goal in mind, we have developed methods to determine delta13C values of commonly reported groundwater contaminants in low-microgram per liter concentrations. Several injection and preconcentration techniques were evaluated for this purpose, i.e., on-column injection, split/ splitless injection, solid-phase microextraction (SPME), and purge and trap (P&T) in combination with gas chromatography-isotope ratio mass spectrometry. The delta13C values of the target compounds were determined by liquid injections of the analytes dissolved in diethyl ether or, in the case of P&T and SPME, by extraction from water spiked with the analytes. P&T extraction was the most efficient preconcentration technique reaching method detection limits (MDLs) from 0.25 to 5.0 microg/L. These are the lowest MDLs reported so far for continuous-flow isotope ratio determinations, using a commercially available and fully automated system. Isotopic fractionation resulting from preconcentration and injection was investigated and quantified for the priority groundwater pollutants methyl tert-butyl ether (MTBE), chloroform, tetrachloromethane, chlorinated ethylenes, benzene, and toluene. The isotopic fractionations caused by the extraction techniques were small but highly reproducible and could therefore be corrected for. P&T was characterized by a higher reproducibility and smaller isotopic fractionations than SPME. Among the liquid injection techniques, cold on-column injection resulted in slightly better precision compared to split/splitless injection. However, the MDLs determined for liquid injections were 4-6 orders of magnitude higher (i.e., 9.5-2800 mg/L) than for P&T and SPME. Since both of the latter methods are solventless, a better chromatographic resolution was obtained than for the liquid injection techniques. The P&T and SPME methods described here are also applicable for CSIA of D/H ratios, which require 10-20 times higher analyte concentrations than 13C/12C analysis. Finally, the applicability of the described methods is demonstrated for pollutant concentrations of only 5-60 microg/L in environmental samples.

Journal Article↗
PubMed1999

Early hominid stone tool production and technical skill 2.34 Myr ago in West Turkana, Kenya.

Well-documented Pliocene archaeological sites are exceptional. At present they are known only in East Africa, in the Hadar and Shungura formations of Ethiopia and in the Nachukui formation of Kenya. Intensive archeological survey and a series of test excavations conducted in the Nachukui formation since 1987 have led to the discovery of more than 25 archaeological sites whose ages range from 2.34 to 0.7 million years before present (Myr), and to the extensive excavation of two 2.34-Myr sites, Lokalalei 1 in 1991 and Lokalalei 2C in 1997. Lokalalei 2C yielded nearly 3,000 archaeological finds from a context of such good preservation that it was possible to reconstitute more than 60 sets of complementary matching stone artefacts. These refits, predating the Koobi Fora refits by 500 Kyr, are the oldest ever studied. Here we describe a technological analysis of the core reduction sequences, based on these refits, which allows unprecedented accuracy in the understanding of flake production processes. We can thus demonstrate greater cognitive capacity and motor skill than previously assumed for early hominids, and highlight the diversity of Pliocene technical behaviour.

Animals↗