Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “soil salinity”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 199 records · Page 11Linked to original sources
PubMed2003

Effects of biotic and abiotic constraints on the symbiosis between rhizobia and the tropical leguminous trees Acacia and Prosopis.

N2-fixing, drought tolerant and multipurpose Acacia and Prosopis species are appropriate trees for reforestation of degraded areas in arid and semiarid regions of the tropics and subtropics. Acacia and Prosopis trees form N2-fixing nodules with a wide range of rhizobia, for example African acacias mainly with Sinorhizobium sp. and Mesorhizobium sp., and Australian acacias with Bradyrhizobium sp. Although dry and hot seasons restrict formation of N2-fixing nodules on Acacia and Prosopis spp., fully grown trees and their symbiotic partners are well adapted to survive in harsh growth conditions. This review on one hand deals with major constraints of arid and semiarid soils, i.e. drought, salinity and high soil temperature, which affect growth of trees and rhizobia, and on the other hand with adaptation mechanisms by which both organisms survive through unfavourable periods. In addition, defects in infection and nodulation processes due to various abiotic and biotic constraints are reviewed. This knowledge is important when Acacia and Prosopis seedlings are used for forestation of degraded areas in arid and semiarid tropics.

Acacia↗
PubMed2006

Influence of a salinity gradient on the vessel characters of the mangrove species Rhizophora mucronata.

BACKGROUND AND AIMS: Although mangroves have been extensively studied, little is known about their ecological wood anatomy. This investigation examined the potential use of vessel density as a proxy for soil water salinity in the mangrove species Rhizophora mucronata (Rhizophoraceae) from Kenya. METHODS: In a time-standardized approach, 50 wood discs from trees growing in six salinity categories were investigated. Vessel densities, and tangential and radial diameters of rainy and dry season wood of one distinct year, at three positions on the stem discs, were measured. A repeated-measures ANOVA with the prevailing salinity was performed. KEY RESULTS: Vessel density showed a significant increase with salinity, supporting its use as a prospective measure of salinity. Interestingly, the negative salinity response of the radial diameter of vessels was less striking, and tangential diameter was constant under the varying environmental conditions. An effect of age or growth rate or the presence of vessel dimorphism could be excluded as the cause of the absence of any ecological trend. CONCLUSIONS: The clear trend in vessel density with salinity, together with the absence of a growth rate and age effect, validates the potential of vessel density as an environmental proxy. However, it can only be used as a relative measure of salinity given that other environmental variables such as inundation frequency have an additional influence on vessel density. With view to a reliable, absolute proxy, future research should focus on finding wood anatomical features correlated exclusively with soil water salinity or inundation frequency. The plasticity in vessel density with differing salinity suggests a role in the establishment of a safe water transport system. To confirm this hypothesis, the role of inter-vessel pits, their relationship to the rather constant vessel diameter and the underlying physiology and cell biology needs to be examined.

Ecosystem↗
PubMed2005

A multivariate analysis of the accumulation and fractionation of major and trace elements in agricultural soils in Hidalgo State, Mexico irrigated with raw wastewater.

We evaluated the accumulation and distribution of major and trace elements in agricultural soils of District 03 (DR03) in the State of Hidalgo, Mexico, irrigated with raw wastewaters for an average of 20 years. Samples of topsoils (0-30 cm depth) were extracted using a modified Tessier method. Total concentrations of the species tested were in the ranges of 675-1176 mg K kg(-1), 277.9-1001 mg Na kg(-1), 6,708-81,854 mg Ca kg(-1), 23,800-106,974 mg Mg kg(-1), 9.2-123.8 mg B kg(-1), 0.6-1.9 mg Cd kg(-1), 11.6-27.4 mg Cr kg(-1), 3.9-47.0 mg Pb kg(-1). Concentrations of As and Hg were very low. Concentrations of total Cd, Cr and Pb were generally below the maximum permissible levels set by the regulations of the European Union except for cadmium, which was in the middle of the maximum European range allowed for two soils. Regarding lead, one soil (S5) could reach the maximum permissible level of the EU in 6 more years of continued irrigation. On the other hand, contents of Pb in the most mobile fractions ("e" in this work) were significant (range: 3-28%). This distribution translated into concentrations of soluble plus exchangeable lead of approximately 2 mg Pb kg(-1) in three of six soils, significantly higher than the Swiss tolerance limit of 1.0 mg Pb kg(-1) for mobile fractions of lead in soils. Multivariate analysis of the data (Pearson correlation and principal component analysis) quantitatively confirmed that: (i) there is a strong covariance between boron contents and several variables representing the salinity of soils (electrolytic conductivity, a variety of alkaline and alkaline-earth total and fraction concentrations). It appears that there is a problem with high boron content in soils, although the salinity is high only for one of the soils (S3); (ii) a significant correlation among irrigation time, lead content (total, fraction easily exchangeable and bound to organic matter and sulfides) and organic carbon in soils was found; (iii) another association among irrigation time, total contents of cadmium, chromium and boron, and organic carbon was observed.

Agriculture↗
PubMed2005

Sustainability of irrigated agriculture in the San Joaquin Valley, California.

The sustainability of irrigated agriculture in many arid and semiarid areas of the world is at risk because of a combination of several interrelated factors, including lack of fresh water, lack of drainage, the presence of high water tables, and salinization of soil and groundwater resources. Nowhere in the United States are these issues more apparent than in the San Joaquin Valley of California. A solid understanding of salinization processes at regional spatial and decadal time scales is required to evaluate the sustainability of irrigated agriculture. A hydro-salinity model was developed to integrate subsurface hydrology with reactive salt transport for a 1,400-km(2) study area in the San Joaquin Valley. The model was used to reconstruct historical changes in salt storage by irrigated agriculture over the past 60 years. We show that patterns in soil and groundwater salinity were caused by spatial variations in soil hydrology, the change from local groundwater to snowmelt water as the main irrigation water supply, and by occasional droughts. Gypsum dissolution was a critical component of the regional salt balance. Although results show that the total salt input and output were about equal for the past 20 years, the model also predicts salinization of the deeper aquifers, thereby questioning the sustainability of irrigated agriculture.

Agriculture↗
PubMed2006

[Three stages of the groundwater chemical properties reacting on the intermittent water deliveries in lower Tarim River, China].

Based on the monitored data of groundwater chemical properties and groundwater depth influenced by five intermittent water deliveries in the lower reaches of the Tarim River, the regulation of groundwater chemistry varying was analysed, the variations in groundwater chemical properties unfolded a clear three-stages changing character under the influence of water deliveries: the initial stage--concentrations of major ions and total dissolved solids (TDS) increasing; the intermediate stage-the concentrations decreasing; the late stage--the chemical properties increasing once more. The variation of groundwater chemistry resulted from many factors, such as the salinities in soil profile, the quality of transported water, the distance from watercourse, the amount and the season of the delivery. However, "salts coming with the water flow, and leaving with it" is the main reason that led to the increase and decrease of chemical properties at first stage and second stage, and with the uprising water level, more and more salinities in soil profile dissolved into ground water and the severe evaporation resulted the concentrations of major ions and TDS increase at late stage. Furthermore, the variations of groundwater chemistry at the intermission of water deliveries have close relationship to the three stages. It should be pointed out that the mode of water transport in surface scope is infeasible due to the climate characteristics of the lower reaches of the Tarim River.

China↗
PubMed1991

Species richness and selenium accumulation of plants in soils with elevated concentration of selenium and salinity.

Field studies were conducted in soils with elevated concentrations of Se and salinity at Kesterson, California. Biomass distribution, species richness, and selenium accumulation of plants were examined for two sites where 15 cm of surface soil was removed and replaced with fill dirt in the fall of 1989, and two sites were native soil cover. The Se concentrations in the top 15 cm of fill dirt ranged from undetectable to 36 ng g-1. For the native soil sites, Se levels ranged from 75 to 550 ng g-1. Soil Se concentrations below 15 cm ranged from 300 to 700 ng g-1 and were comparable between the fill dirt and the native soil sites. At least 20 different plant species were brought into the two fill dirt sites with the top soil. Avena fatua L., Bassia hyssopifolia Kuntze Rev. Gen. Pl., Centaurea solstitialis L., Erysimum officianale L., Franseria acanthicarpa Cav. Icon., and Melilotus indica (L.) All. contributed over 60% of the total biomass. Only 5 species were found in the native soil sites, and salt grass (Distichlis spicata L.) was the predominant species and accounted for over 80% of the total biomass. Between 1989 and 1990, two years after the surface soil replacement, the two fill dirt sites had a 70% reduction in species richness. Plant tissue selenium concentrations were found to be quite variable between plant species and between sites of sampling. At the fill dirt sites, the plant species with deep root systems accumulated greater amounts of selenium than the shallow-rooted species. The soil selenium concentration of the field soil had no negative effect on pollen fertility, seed set, and seed germination for the plant species examined. However, seedling growth was impaired by the soil selenium concentrations. This suggests that a selection pressure of soil Se concentration may have been imposed on plant species such as M. indica in an early stage of its life cycle.

Plant Development↗
PubMed2007

The effects of sediment-laden waters on irrigated lands along the lower Yellow River in China.

Expansion of irrigation in the Yellow River (Huang He in Chinese) Basin of China is a major accomplishment of the post-revolutionary period in China. Irrigation reliance on the Yellow River was anticipated to not only supply greater reliability of water for crops, but also to improve the productivity of aeolian, saline and alkali soils because of the high sediment loads in the river. Irrigation expansion also was a significant factor in affecting human modification of the landscape ecosystem in the lower reaches of the Yellow River. Based on field investigation and sampling of the amount and distribution of used suspended sediment load in irrigated areas, this paper analyzes the impact of the suspended sediment on soil texture, fertility and salinity and the consequences to the landscape ecosystem. Results indicate that soil quality has indeed been improved through irrigation and related deposition of sediment, but some local problems created by long periods of irrigation should not be ignored in the future.

Agriculture↗
PubMed1982

Effect of salinity on Rhizobium growth and survival.

This study examines the effect of salinity on the growth and survival of Rhizobium spp. in culture media and soil. Eleven isolates from saline and nonsaline environments were compared. The growth (mean doubling time) of all strains and species tested decreased when the electrical conductivity of the culture medium (yeast extract-mannitol) was raised from 1.2 mS cm to 6.7 mS cm (15% seawater equivalent) or to 13.1 mS cm (28% seawater equivalent). Three of eleven strains failed to grow at 13.1 mS cm. Although growth was affected by salinity, four strains selected from the growth rate study could survive in extremely high concentrations of salt. Two strains with growth rates sensitive to salt and two strains with growth rates relatively unaffected by salt were inoculated into solutions with electrical conductivities of up to 43.0 mS cm (92% seawater equivalent). Not only did all four strains survive the initial osmotic shock (at 5 h after inoculation), but it was not until 27 days after inoculation that the sensitive strains exhibited a significant reduction in viable numbers. The salt-tolerant strains survived for more than 65 days with no reduction in viable counts. The interaction between soil moisture tension and soil salinity in relation to Rhizobium survival in gamma-irradiated soil was also examined. Six treatment combinations were used, ranging from -0.1 bars and 0.2 mS cm to -15 bars and 12 mS cm. Sensitive strains declined from 10 to 10 organisms per g of soil after 84 days of incubation at -15 bars and 12 mS cm. Tolerant strains survived for the same period with no loss in viable numbers. The results of these experiments indicate that many strains of Rhizobium can grow and survive at salt concentrations which are inhibitory to most agricultural legumes. The emphasis of research concerning the effects of salinity on symbiotic nitrogen fixation should, therefore, be directed to aspects of the symbiosis other than the survival of the Rhizobium spp.

Journal Article↗
PubMed1978

Urease activity in different soils of Egypt.

Samples from two depths (0--15 and 15--30 cm) of five Egyptian soils: sandy, calcareous, fertile alluvial, saline alluvial, and alkali alluvial were tested for urease activity. Samples were treated with farmyard manure at rates of 0 and 0.5% C, and moisture at levels of 50, 65, and 80% of the water holding capacity. The studied Egyptian soils showed different activities of urease. Decreases in the values were shown by depth of sampling and varied in their intensities according to soil type, except for saline soil which revealed an opposite trend by the higher activity of its sub-surface layer. Order of activity was the following: fertile, saline, alkali, calcareous, and sandy soil. Farmyard manure slightly increased the activity of the enzyme. Incubation of moistened samples revealed that the optimum moisture content was 50% of W.H.C. for the tested soils, except for saline which showed best results at 65% of W.H.C.

Egypt↗
PubMed2026

Physiological and transcriptomic responses of sunflower to combined saline-alkali stress.

BACKGROUND: Sunflower (Helianthus annuus L.), an important oilseed crop, is often used as a pioneer species for improving saline-alkali soils. However, the molecular mechanisms underlying sunflower seedling responses to combined saline-alkali stress remain unclear. This study aimed to elucidate the molecular basis of saline-alkali tolerance at the seedling stage by comparing physiological and transcriptomic responses between tolerant and sensitive sunflower hybrids. The saline-alkali tolerant hybrid K-27 and the sensitive hybrid K-7 were used as experimental materials. Root samples were collected at 0, 3, 12, 24, 48, and 96 h after exposure to combined saline-alkali stress (0.5% NaCl + Na2CO3, adjusted to pH 9.0). Physiological parameters, including antioxidant enzyme activities, osmolyte contents, ion concentrations, membrane damage levels, and cell wall components, were measured, followed by transcriptome sequencing analysis. RESULTS: Phenotypic analysis showed that the root length inhibition rate and fresh weight loss rate of K-27 were significantly lower than those of K-7, indicating stronger tolerance. Physiological analysis revealed that K-27 exhibited an inducible antioxidant enzyme response pattern. In addition, K-27 achieved osmotic adjustment through sustained proline accumulation (peaking at 12 h and remaining significantly higher than that of K-7 at 96 h) and exhibited higher basal levels of lignin and hemicellulose. Transcriptome analysis showed that the number of upregulated genes in K-27 was consistently higher than in K-7 at all time points, with 5,283 genes upregulated as early as 3 h after stress exposure. Venn analysis identified 44 core differentially expressed genes (cDEGs) shared between the two genotypes, which were mainly enriched in auxin biosynthesis regulation, phenylpropanoid biosynthesis, and glutathione metabolism. Among them, the benzoic acid carboxyl methyltransferase gene (BAMT) was continuously upregulated in K-27 but persistently downregulated in K-7. In addition, five other genes (encoding fatty aldehyde dehydrogenase, pectin methylesterase inhibitor, glutathione S-transferase, INPP5E, and HXXXD-type acyltransferase) exhibited significantly higher expression levels in K-27. CONCLUSION: K-27 tolerates combined saline-alkali stress through coordinated multi-layered response mechanisms, including inducible antioxidant defense, maintenance of ion homeostasis, sustained osmotic adjustment, and activation of the phenylpropanoid metabolic pathway. Candidate genes such as BAMT may provide potential targets for molecular breeding of saline-alkali tolerant sunflower, although their functions require further experimental validation.

Helianthus↗
PubMed2001

Cadmium uptake by plants.

Food chain contamination by cadmium (Cd) is the most important pathway of Cd exposure to the general population, excluding smokers. Factors affecting transfer of Cd from soil and air to plants are reviewed. The direct deposition of airborne Cd in the plants has only a marginal influence on the crop Cd concentrations in rural areas with low atmospheric Cd deposition, i.e. < 2 g Cd ha(-1) y(-1). However, the indirect evidence is presented, predicting that airborne Cd may be the major source of crop Cd and dietary Cd in conditions where atmospheric Cd deposition is well above 10 g Cd ha(-1) y(-1). This situation may occur around pyrometallurgic smelters with high Cd emissions. The absorption of Cd by plant roots is more influenced by soil factors, controlling Cd bioavailability than by total soil Cd. Elevated soil-plant Cd transfer is observed in soils with chloride salinity, in zinc deficient soils and acid soils.

Absorption↗
PubMed2000

Adjustments in leaf water relations of mangrove (Avicennia germinans) seedlings grown in a salinity gradient.

We used pressure-volume analysis and dewpoint hygrometry to determine leaf water relation parameters of mangrove (Avicennia germinans L.) seedlings grown at salinities of 0, 8, 20 and 32 per thousand. Seedlings responded to an increase in salinity from 0 to 32 per thousand by an increase in leaf succulence as reflected in an increase in leaf water content per unit area from 300 to 360 g m(-2). Additionally, osmotic potential at full turgor decreased from -2.3 to -3.5 MPa and osmotic potential at zero turgor decreased from -2.7 to -4.3 MPa. Cell elasticity decreased as salinity increased from 0 to 32 per thousand, as indicated by a progressive increase in volumetric modulus of elasticity from 19 to 27 MPa. Increased leaf succulence enabled leaves to sequester large amounts of solutes without adversely increasing cell osmotic pressure. On the other hand, osmotic adjustment facilitated turgor maintenance as water potential diminished. Salinity-induced decreases in tissue elasticity generated greater water potential differences between leaves and soil under saline conditions than under non-saline conditions.

Journal Article↗
PubMed2004

Geochemical features of topsoils in the Gaza Strip: natural occurrence and anthropogenic inputs.

The aims of this study were to establish the current contents of trace metals and major elements in agricultural soils of the Gaza Strip and to identify the main anthropogenic inputs affecting trace metal contents. An extensive soil survey was conducted in agricultural and nonagricultural areas. One hundred and seventy sites that represent a broad range of soil types and locations were selected. The results revealed that soils in the Gaza Strip fall within the range of uncontaminated to slightly contaminated. Up to 90% of the tested soils had trace metal contents equal to the international background values. Ten percent showed slight contamination, primarily by Zn, Cu, As, and Pb, due to anthropogenic inputs, and the mean concentrations of these elements were 180, 45, 13, and 190 mg/kg, respectively. The trace metal contents varied, with the highest contents detected in the southern regions (where one finds clay soil and low precipitation) and the lowest in the northern areas (where are sandy soil and high precipitation). The soil geochemistry is dependent on soil type and location and to a lesser extent on crop pattern and fertilizer and fungicide application. Anthropogenic inputs lead to the enrichment of Zn, Pb, Cu, and Cd in the agricultural soils. The pollution of several investigated sites was found to be most severe for Zn, Pb, Cu, Cd, and, to a somewhat lesser extent, for As, whereas anthropogenic input of Hg, Ni, and Co seemed to be less important. The application of Cd-containing phosphate fertilizers coupled with Cu-containing fungicides may be an important source of Cd and Cu in several soils. High Zn levels (1000 ppm) in several soils may be caused by sewage sludge, which has an average Zn content of 2000 ppm. Saline-sodic soils were found in the central and southern regions, where the soils are characterized by high contents of Na and salty groundwater. Elevated Cl, Na, Zn, and Pb contents in some areas need further investigation to determine their ecological and health implications.

Agriculture↗
PubMed2005

Interpretation and discrimination of marshy wetlands by soil factors in the Kuan-Tu Natural Park, Taiwan.

This work investigated soil samples collected from Kuan-Tu wetlands, Taiwan. Factor analysis was performed to explain the impact of various soil factors on this marshy wetlands located in suburban Taipei. The results indicated that the latent factors were heavy metals, salinity, and soil organic matter. Canonical discriminant analysis was used to improve an existing vegetation classification scheme by identifying the physical-chemical properties of sediment in Kaun-Tu wetlands, Taiwan. Predictive discriminant analysis was used to examine the ability of the models to predict class membership for unknown soil sample. Multivariate analysis of the spatial patterns of soil quality and vegetation types showed that different properties of soil grew different types of vegetation and absorbed contaminants differently. We can feasibly conserve a suitable habitat for wetland biology by processing these unstable predictor variables. The methodology and results provide useful information concerning the Kuan-Tu wetlands and may be applicable to other wetlands with similar properties that are experiencing similar environmental issues.

Discriminant Analysis↗
PubMed2000

Persistent Impacts of Trace Metals from Mining on Floodplain Grass Communities Along Soda Butte Creek, Yellowstone National Park.

/ In Yellowstone National Park, tailings and associated trace metals from past mining have been deposited along 28 km of Soda Butte Creek by large flood events. This study documents grass species diversity, density, and biomass; trace metal concentrations in soils; and soil pH, salinity, and clay content in four selected floodplain meadows contaminated by these tailings. Trace metal levels frequently exceed acceptable concentrations for agricultural soils at sampling points within the meadows. pH levels within flood-deposited tailings are strongly to moderately acid, while pH levels outside of tailings deposits are neutral. The data analysis: (1) shows that metals and acidity associated with tailings affect plant biomass, density, and diversity; (2) documents that the vegetation/metal and vegetation/pH associations are more of a threshold than a linear relationship; and (3) suggests that other factors may be involved in structuring the community. Vegetation diversity, density, and biomass decrease at threshold levels of trace metal concentrations and soil pH in all four meadows. CuSum plots of diversity in relation to trace metal levels show a decrease in mean diversity at 315 ppm copper, 22 ppm arsenic, 4.2% iron, 65 ppm lead, and 170 ppm zinc. Densities of Phleum pratense and Poa pratensis were significantly lower (P </= 0.001) on plots with more than 250 ppm copper. Above-ground biomass of Phleum pratense was also significantly lower on plots with copper levels above 250 ppm. Decreased mean grass density was found on plots with pH < 6.4, but the only statistically significant difference was for Juncus balticus, which had increased density on plots with pH < 6.4. In contrast to the clear impacts of trace metals and pH on vegetation, other site characteristics did not alter measured vegetation characteristics.

Journal Article↗
PubMed2025

Untargeted metabolomics reveals anion and organ-specific metabolic responses of salinity tolerance in willow.

Willows can alleviate soil salinisation while generating sustainable feedstock for biorefinery, yet the metabolomic adaptations underlying their tolerance remain poorly understood. Salix miyabeana was treated with two environmentally abundant salts, NaCl and Na2SO4, in a 12-week pot trial. Willows tolerated salts across all treatments (up to 9.1&#x2009;dS&#x2009;m-1 soil ECe), maintaining biomass while selectively partitioning ions, confining Na+ to roots and accumulating Cl- andin the canopy and adapting to osmotic stress via reduced stomatal conductance. Untargeted metabolomics captured >5000 putative compounds, including 278 core willow metabolome compounds constitutively produced across organs. Across all treatments, salinity drove widespread metabolic reprogramming, altering 28% of the overall metabolome, with organ-tailored strategies. Comparing salt forms at equimolar sodium, shared differentially abundant metabolites were limited to 3% of the metabolome, representing the generalised salinity response, predominantly in roots. Anion-specific metabolomic responses were extensive. NaCl reduced carbohydrates and tricarboxylic acid cycle intermediates, suggesting potential carbon and energy resource pressure, and accumulated root structuring compounds, antioxidant flavonoids, and fatty acids. Na2SO4 salinity triggered accumulation of sulphur-containing larger peptides, suggesting excess sulphate incorporation leverages ion toxicity to produce specialised salt-tolerance-associated metabolites. This high-depth picture of the willow metabolome underscores the importance of capturing plant adaptations to salt stress at organ scale and considering ion-specific contributions to soil salinity.

Salix↗
PubMed2006

[Study on diversity of actinomycetes under salt and alkaline environments].

Actinomycetes have been attached a great attention owing to these microorganisms product various natural compounds and have special mechanism of adapting extreme environments. But the research work on actinomycetes under extreme environments is few. Soil and sediment samples were collected from saline and alkaline soil and lakes in Xinjiang, Qinghai Province, P. R. China and Egypt. Diversity and some biological characteristics of Actinomycete were studied by using cultivation and DGGE methods. Results showed that large amount of unknown microorganisms exist in the salt lake Chaka, isolated strains account for only a small portion of species diversity. Designing new strategies for isolation of as yet uncultured microorganisms from natural extreme environments is the key step to exploit microbial resources. The 87% of alkalophilic or alkalinetolerant actinomycete strains were able to grow at pH 6.0 - 12.0. 14 strains grow well at pH 8.5 - 11.5, but not at pH 7.0. 34 halotolerant actinomycete cab grow in 15% - 20% NaCl. Based on the study of the halophilic and halotolerant actinomycetes isolated from the saline and the alkaline soils collected from Xinjiang and Qinghai Province, China, we can conclude that the relationship of actinomycetes (especially halophilic actinomycetes strains) to positive ions such as Na+, K+ and Mg2+ is very complex, and there were sodiumphilic, kaliumphilic, magnesiumphilic, and calciumphilici actinomycete strains. One new family, eight new genera and more than 30 new species of halophilic and alkalophilic actinomycetes were fund. Many strains with PKS genes were selected. We believe based on the research results that there is a very high density of new or unknown actinomycete resources in these areas in China and Egypt.

Actinobacteria↗
PubMed2026

Development of molecular markers associated with saline-alkali tolerance in rapeseed (Brassica napus L.).

A total of 947 saline-alkaline tolerance-related molecular markers and a 5K cGPS genotyping chipwere developed, providing practical tools for marker-assisted selection and molecular design breeding of saline-alkaline-tolerant rapeseed. Rapeseed (Brassica napus L.) has relatively strong tolerance to saline-alkaline stress and shows great potential for the sustainable utilization and improvement of saline-alkaline soils. However, the breeding of highly tolerant cultivars still mainly depends on conventional hybridization combined with phenotype-based selection, which constrains breeding efficiency. In this study, previously reported saline-alkaline tolerance-related genes from rapeseed, rice, maize, wheat, sorghum, and Arabidopsis were collected. Candidate gene-based association analysis enabled the development of molecular markers and a genotyping chip. A total of 483 significantly associated genes were identified, among which 355 genes contained favorable haplotypes. Molecular markers were successfully developed for 275 genes, including 746 KASP and 201 InDel marker pairs, and four marker pairs were randomly selected for validation. In addition, a 5K cGPS liquid-phase chip (HZSW-cGPS-BRNAP-04), was developed and showed a high call rate and excellent reproducibility in genotyping. These markers and the chip are expected to improve the breeding efficiency of saline-alkaline-tolerant rapeseed cultivars. Overall, this study provides useful tools for early-generation evaluation and marker-assisted selection (MAS), and provides a foundation for molecular design breeding of saline-alkali-tolerant rapeseed.

Brassica napus↗