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At least 199 records · Page 11Linked to original sources

Non-parametric maximum likelihood estimators for disease mapping.

A Non-Parametric Maximum Likelihood approach to the estimation of relative risks in the context of disease mapping is discussed and a NPML approximation to conditional autoregressive models is proposed. NPML estimates have been compared to other proposed solutions (Maximum Likelihood via Monte Carlo Scoring, Hierarchical Bayesian models) using real examples. Overall, the NPML autoregressive estimates (with weighted term) were closer to the Bayesian estimates. The exchangeable NPML model ranked immediately after, even if it implied a greater shrinkage, while the truncated auto-Poisson showed inadequate for disease mapping. The coefficients of the autoregressive term for the different mixtures have clear interpretations: in the breast cancer example, the larger cities in the region showed high rates and very low correlation with the neighbouring areas, while the less populated rural areas with low rates were strongly positively correlated each other. This pattern is expected since breast cancer is strongly correlated with parity and age at first birth, and the female population of the rural areas experienced a decline in fertility much later than those living in the larger cities. The leukemia example highlighted the failure of the Poisson-Gamma model and other general overdispersion tests to detect high risk areas under specific conditions. The NPML approach in Aitkin is very general, simple and flexible. However the user should be warned against the possibility of local maxima and the difficulty in detecting the optimal number of components. Special software (such as CAMAN or DismapWin) had been developed and should be recommended mainly to not experienced users.

Algorithms↗

Assessing health impact of environmental pollution sources using space-time models.

We used disease mapping for health impact assessment of the national airport of the Netherlands. Spatio-temporal models were used to relate hospital discharge data for acute myocardial infarction and bronchitis in 1991, 1992 and 1993 to noise and distance from the airport. To compare models a discrepancy measure (expected predictive deviance) proposed by Carlin and Louis was used. The best fitting model was the most general one with inclusion of spatial and temporal components. Results on the effects of the covariates noise and distance from the airport were somewhat inconsistent between men and women and between the two diseases: for women no association between bronchitis and distance from the airport was found, whereas for men no association between acute myocardial infarction and noise was found.

Aircraft↗

Modelling categorical covariates in Bayesian disease mapping by partition structures.

We consider the problem of mapping the risk from a disease using a series of regional counts of observed and expected cases, and information on potential risk factors. To analyse this problem from a Bayesian viewpoint, we propose a methodology which extends a spatial partition model by including categorical covariate information. Such an extension allows detection of clusters in the residual variation, reflecting further, possibly unobserved, covariates. The methodology is implemented by means of reversible jump Markov chain Monte Carlo sampling. An application is presented in order to illustrate and compare our proposed extensions with a purely spatial partition model. Here we analyse a well-known data set on lip cancer incidence in Scotland.

Bayes Theorem↗

The Fargo Map Test: a standardized method for assessing remote memory for visuospatial information.

At present, there is no standardized method for assessing remote memory (RM) for visuospatial information in humans. The Fargo Map Test (FMT) uses knowledge of the locations of geographical features in regions of the country in which subjects currently live and formerly resided to provide a measure of this aspect of RM. Two different formats of the FMT have been developed, which differ in their demands for fine motor skill, ease of scoring, and in the amount and nature of geographical knowledge that can be measured. Preliminary findings suggest that both formats are equally sensitive to the influences of gender and age in normal subjects. Furthermore, knowledge of the geography of regions of prior residence appears to be stable over a period of at least 15 years.

Adult↗

Climate and head form in India.

The relationship between head form and climatic variation was investigated in different tribal and caste populations of India. The magnitude of the cephalic index varies significantly in different zones. In tropical zones, head form is longer (dolicocephalic), but in temperate zones, head form is more round (mesocephalic or brachycephalic), especially among Scheduled Tribes (ST) and Scheduled Castes (SC) than among other castes. These trends possibly support a climatic adaptation model in head form differences among ST and SC in India.

Analysis of Variance↗

Genetic variation in North Amerindian populations: the geography of gene frequencies.

Ten-level synthetic gene frequency maps derived from a principal component analysis of seven polymorphic loci are displayed for a large sample of North Amerindian populations. These maps are useful for assessing population affinities over broad geographical regions and perhaps, as others have argued, for inferring recent migrations. The influence of European admixture is investigated by deleting highly admixed populations and regenerating the maps. In broad outline the resultant geographic patterning, while appearing more homogeneous, preserves many features of the maps that include the highly admixed samples--especially with respect to the Eskimo/non-Eskimo dichotomy. Further, in an effort to evaluate how varying the number of display levels affects patterning as well as interpretation, the maps were replotted at 5 and 20 levels. The 5-level maps are found to accentuate differences between the full data set and the less admixed data set, while the 20-level maps tend to obscure these differences.

Gene Frequency↗

Peopling of Andean South America.

Archeological, craniometrical, and genetic information is utilized to reconstruct possible migration routes used in the peopling of Andean South America. Special emphasis is given to the elaboration of craniometrical isoline maps and its application in testing models of population displacement based on archeological data. A genetic distance analysis among linguistic groupings complements the conclusions based on archeological and craniometrical information.

Agriculture↗

A cytoarchitectonic atlas of the mouse hypothalamus.

A description of the organization, areas, and cell groups within the hypothalamus of the mouse is presented in detail. Photomicrographs of cell-stained serial sections through the hypothalamus in frontal, sagittal and horizontal planes are included. The hypothalamus has been divided basically into medial and lateral parts with most well-defined cell groups or nuclei lying within the medial subdivision and surrounded by diffuse collections of cells referred to as areas. The heterogenetiy of cell types within most hypothalamic nuclei and areas has been emphasized with the consequent implications for heterogeneity of neuronal connections and of functions. Recently introduced neuroanatomical techniques permitting increased attention to the cellular level of organization have demonstrated precise connections and functional localization of cells within the hypothalamus. While cytoarchitectonic distinctions imply functional distinctions, morphological and experimental evidence suggest the existence also of systems of cells which transcend conventional cytoarchitectonic boundaries, the cells within each system being interconnected functionally or neuronally.

Animals↗

Visual and statistical assessment of spatial clustering in mapped data.

Maps have seen increasing use to examine regional variation in health, but there has been little research on the visual perception of spatial patterns in mapped data. Theories of graphical perception suggest that the interpretation of maps is complex relative to other types of graphical material. This paper describes an experiment in which observers assessed a series of maps with respect to their amount of clustering. Maps with various types of spatial pattern were visually distinguishable; comparisons between variants of the same map, however, using different shading and plotting symbols indicated that the method of data representation also had a strong effect on visual perception. There was some evidence for a learning effect in complex maps. The relationship between the visual assessments and a statistical measure of spatial autocorrelation was significant but imperfect.

Cluster Analysis↗

Development and applications of a city-level alcohol availability and alcohol problems database.

Data on alcohol availability and problems in all cities in Los Angeles County were collected from several different sources and linked together to form a Local Alcohol Availability Database (LAAD). The two major purposes of the project are to provide a city-level alcohol availability and alcohol-related problems database needed by local community alcohol policy planners and to collect the data necessary for research on the relationship between these measures. The prevalence of drunk driving arrests is displayed on a map. We describe how the LAAD has been used to guide alcohol policy decisions. A fixed year and city effects regression model suggests that outlet density is positively related to several alcohol-related problems.

Accidents, Traffic↗

Feasibility of contour mapping epidemiological data with missing values.

Data of epidemiologic interest often occur as spatial information during each of several time periods. In most cases data are available from a set of regions or localities which can be viewed as points in a plane. Although contour mapping is useful for displaying these data, the lack of data for all data points in a region may lead to erroneous interpretation. In this paper we use stimulation to investigate the impact of missing data points for contour mapping using two distinct simulated spatial-time distributions for epidemiologic variables. A model for the occurrence of malaria in localities randomly distributed in one region is chosen as the prototype for data generation.

Bayes Theorem↗