Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “MAMMALS”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 199 records · Page 11Linked to original sources
PubMed1991

Contrasting mutation rates in mitochondrial and nuclear genes of yeasts versus mammals.

Base substitutions have been compared in two mitochondrial and two nuclear genes from three yeasts and three mammals. In yeasts, the two mitochondrial genes, cytochrome oxidase subunit 2 (COX2) and apocytochrome b (CYB), have fewer changes on a percentage basis than the nuclear-encoded cytochrome c (CYC) gene. By contrast, in mammals, the same mitochondrial genes have more mutations than CYC on a percentage basis. Sequence comparisons of the nuclear small-subunit ribosomal RNA (nSSU) gene shows that there are more substitutions per unit length in the three yeasts than in the three mammals. This result suggests that although the yeasts are more distantly related than the mammals, their mitochondrial genes have accumulated fewer changes.

Amino Acid Sequence↗
PubMed1985

Evolution of the single copy alpha A-crystallin gene: differently sized mRNAs of mammals and birds show homology in their 3' non-coding regions.

alpha A-Crystallin, a major structural polypeptide of the vertebrate eye lens, is evolutionarily highly conserved. We have analyzed the corresponding nucleic acid sequences in both genomic DNA digests as well as in lens cytoplasmic RNA preparations from a wide variety of vertebrates by blot hybridization with cloned rat alpha A2-crystallin cDNA probes. The probes are not able to hybridize under any conditions to RNA and DNA derived from fishes and amphibia, but do show substantial homology with the sequences of mammals, birds and reptiles. The alpha A-crystallin gene, which has been isolated from a hamster gene library occurs only once in the haploid genome. Coding and 3'-untranslated regions of alpha A2-crystallin mRNA are conserved among all mammals and birds examined. However, the regions comprising the conserved sequences are differently represented in the ultimate mRNA. The alpha A2-mRNA 3'-non-coding regions of reptiles and birds are 300-550 bases longer than those of mammals. Some rodents produce next to the alpha A2-mRNA another messenger that encodes the alpha AIns-polypeptide possessing an insertion of 22/23 amino acid residues between positions 63 and 64 of the alpha A2-polypeptide chain. alpha A2 and alpha AIns-mRNA are generated from a single gene as major and minor species, respectively, in a proportion which is similar to the ratio of the polypeptides found in vivo and in vitro. The size heterogeneity of the alpha A2-mRNA from most mammals examined is due to the variable size of the poly(A) tail.

Animals↗
PubMed2002

Pre-mRNA splicing in Schizosaccharomyces pombe: regulatory role of a kinase conserved from fission yeast to mammals.

Most primary messenger RNA transcripts (pre-mRNAs) in eukaryotes contain intervening sequences that must be precisely removed to generate a functional mRNA. The excision of the intervening sequences, the introns, from a pre-mRNA and the concomitant joining of the flanking sequences, the exons, is called pre-mRNA splicing. Pre-mRNA splicing takes place in large ribonucleoprotein machinery, the spliceosome. Although the function and components of this machinery appear to be highly conserved between organisms, many distinct differences between budding yeast, Saccharomyces cerevisiae, and fission yeast, Schizosaccharomyces pombe, have been found, emphasizing their evolutionary distance. Most interestingly, fission yeast appears to reflect the more conservative evolutionary development regarding pre-mRNA splicing. Many spliceosomal components, including the five small nuclear RNAs, which most likely form the catalytic core of the spliceosome, show a higher degree of similarity with the components of the splicing machinery found in mammals. In addition, several regulatory components of the spliceosome detected in mammals are absent in Sac. cerevisiae, but present in Sch. pombe. Here, we review recent progress made in our understanding of the control of pre-mRNA splicing in Sch. pombe. The focus is on Prp4p kinase, first discovered in fission yeast and also present in mammals, but absent in Sac. cerevisiae. Results from both mammals and Sch. pombe suggest that Prp4p plays a key role in regulating pre-mRNA splicing and in connecting this process with the cell cycle.

Animals↗
PubMed2000

The function of the medial superior olive in small mammals: temporal receptive fields in auditory analysis.

Traditionally, the medial superior olive, a mammalian auditory brainstem structure, is considered to encode interaural time differences, the main cue for localizing low-frequency sounds. Detection of binaural excitatory and inhibitory inputs are considered as an underlying mechanism. Most small mammals, however, hear high frequencies well beyond 50 kHz and have small interaural distances. Therefore, they can not use interaural time differences for sound localization and yet possess a medial superior olive. Physiological studies in bats revealed that medial superior olive cells show similar interaural time difference coding as in larger mammals tuned to low-frequency hearing. Their interaural time difference sensitivity, however, is far too coarse to serve in sound localization. Thus, interaural time difference sensitivity in medial superior olive of small mammals is an epiphenomenon. We propose that the original function of the medial superior olive is a binaural cooperation causing facilitation due to binaural excitation. Lagging inhibitory inputs, however, suppress reverberations and echoes from the acoustic background. Thereby, generation of antagonistically organized temporal fields is the basic and original function of the mammalian medial superior olive. Only later in evolution with the advent of larger mammals did interaural distances, and hence interaural time differences, became large enough to be used as cues for sound localization of low-frequency stimuli.

Animals↗
PubMed2005

Nitrogen outputs from fecal and urine deposition of small mammals: implications for nitrogen cycling.

The contribution of small mammals to nitrogen cycling could have repercussions for the producer community in the maintaining or perhaps magnifying of nitrogen availability. Our objective was to model nitrogen outputs (deposition of feces and urine) of small mammals in an old-field ecosystem and estimate the amount of fecal and urinary nitrogen deposited annually. To address this objective, we used models from laboratory studies and combined these with data from field studies to estimate dietary nitrogen and monthly and annual nitrogen outputs from fecal and urine deposition of five rodent species. The models accounted for monthly fluctuations in density and biomass of small-mammal populations. We estimated that the minimal amount of nitrogen deposited by rodents was 1.0 (0.9-1.1) and 2.7 (2.6-2.9) kg Nha(-1) year(-1) from feces and urine, respectively, for a total contribution of 3.7 (3.5-4.0) kg Nha(-1) year(-1). Hispid cotton rats (Sigmodon hispidus) accounted for >75% of the total nitrogen output by small mammals. Our estimates of annual fecal and urinary nitrogen deposited by rodents were comparable to nitrogen deposits by larger herbivores and other nitrogen fluxes in grassland ecosystems and should be considered when assessing the potential effects of herbivory on terrestrial nitrogen cycles.

Animal Nutritional Physiological Phenomena↗
PubMed1990

The role of helminths in the biological control of mammals.

Biological control of invertebrates has been successful while that of vertebrates has been, with the exception of myxomatosis in rabbits, unsuccessful; reasons for this are discussed. Demographic studies of small mammals suggest that population regulation occurs by several different mechanisms, more than one of which may be acting at the same time. Coevolution is an important phenomenon in host-parasite associations, nevertheless parasites may limit host population abundance. The basis of the regulatory effect on the host population is that parasite-induced host mortality or reduction in fecundity is density-dependent. Increasing evidence of the density-dependent effects of helminths on host survival and reproduction is forthcoming from laboratory studies but has not been confirmed in the field. The theory that a helminth parasite may regulate mammal population abundance has been verified recently in the laboratory. A multidisciplinary research programme aimed at understanding the mechanisms responsible for formation of house mouse (Mus domesticus) plagues and seeking strategies to reduce mouse numbers is discussed. One aspect of the work involves investigation of the potential of the nematode, Capillaria hepatica, as a biological agent in the control of wild mice in the cereal-growing regions of Australia. Biological control of mammals is viewed within the context of integrated pest management. A helminth species which reduces host survival or fecundity at an increasing rate as host abundance increases has a role in host population regulation. There is potential to capitalize on that role and apply the helminth as a biological agent in the control of mammals which have attained pest status.

Animals↗
PubMed1977

Quantitative lung morphology in newborn mammals.

We have examined the lungs of eleven species of newborn mammals by quantitative morphometric techniques and related the findings to body weight (BW) and O(2) consumption (Vo2 is found to be proportional to BW(0.88); this exponent is significantly greater than the value of about 0.73, repeatedly found for adult mammals. Lung volume (LV) is essentially proportional to BW, and neonatal alveolar size - as indicated by mean chord length - is nearly constant among species and independent of BW. Thus the respiratory surface area (SA) is not proportional to Vo2, as in adult mammals, but to Vo2(1.23). Neonates of small species have lower SA/Vo2 ratios than adult mammals, possibly owing to constraints of surface forces on alveolar size. Newborn members of larger species have SA/Vo2 values in excess of the adult range. Published data on human newborn lung dimensions suggest that the human infant may have an unexpectedly low SA/Vo2 value in relation to BW. Whether this is a valid finding, or whether it derives from methodological differences between studies cannot be ascertained from the available data.

Aging↗
PubMed1994

Global contamination by persistent organochlorines and their ecotoxicological impact on marine mammals.

The present paper overviews the global contamination by persistent organochlorines and their ecotoxicological implications on marine mammals. The recent pattern of contamination by organochlorine residues in the coastal environment is prominent in tropical regions due to continuous usage in the low-latitude developing countries. The major emission source of organochlorines is probably the tropical belt and large quantities of volatilized contaminants are dispersed through the atmosphere on global terms. Reflecting this, a considerable contamination was observed in open ocean tropical waters as well as in the Arctic and nearby waters. The study of the mass transfer of organochlorines at the air-water interface suggests that the oceanic water bodies, particularly Arctic waters, act as a sink for persistent contaminants. In this regard, the marine mammals, particularly cetaceans, are one of the animal groups receiving high concentrations of persistent organochlorines arising out of a worldwide contamination. They can amplify much greater amounts of toxic contaminants through feeding and also pass them in large quantities from one generation to the next through lactation. Unfortunately, these animals have a smaller capacity for degradation of these contaminants due to the specific mode of cytochrome P-450 enzyme systems. These drug-metabolizing enzyme systems may be related to the possible effects of persistent organochlorines, particularly coplanar PCBs. Furthermore, the residue levels of these contaminants in marine mammals are unlikely to decline in the near future. Considering all these facts, it may be concluded that marine mammals are one of the most vulnerable and possible target organisms with regard to long-term toxicity of hazardous man-made chemicals in the future.

Animals↗
PubMed1994

Contaminant monitoring studies using marine mammals and the need for establishment of an International Environmental Specimen Bank.

Many hazardous chemicals have polluted the environment of the earth. Among them, organochlorine compounds and heavy metals have dispersed worldwide. I reviewed the results of cooperative research based on specimens shared with colleagues at Ehime University, Japan: (1) bioaccumulation of organochlorine compounds (DDT, PCB, HHC, etc.) and heavy metals (Hg, Cd, Pb, etc.) from sea water to marine mammals through the food chain, (2) placental transfer of contaminants, (3) transfer of contaminants through lactation, (4) biological impacts of contaminants to marine mammals, and (5) the global movement of contaminants. This work was based on about 1200 specimens of marine mammals obtained from scientific research over 17 years during 1976-1992. Soft tissues were banked at -20 degrees C at Ehime University while related materials and information were deposited in the National Science Museum, Tokyo. These and other materials should be preserved in good condition in an international specimen bank for future global environmental monitoring studies, the examination of hazardous chemicals which are currently unknown, the reexamination of the same samples in future using more advanced equipment by different scientists, and the reaction to unknown environmental questions, etc. The need for the establishment of an International Environmental Specimen Bank for marine mammals and other marine organisms are recommended.

Animals↗
PubMed1993

Variability in brain ganglioside content and composition of endothermic mammals, heterothermic hibernators and ectothermic fishes.

Content and composition of brain gangliosides were compared among endothermic mammals, heterothermic hibernators and ectothermic fishes from habitats with extreme ambient temperatures (tropic vs. antarctic waters). In general the content of brain gangliosides in fishes is significantly lower and exhibits a greater variability than in mammals. The composition of brain gangliosides was investigated using both one- and two-dimensional High Performance Thin Layer Chromatography (HPTLC). Both techniques showed a remarkable increase in the number of individual ganglioside fractions and an additional increase of higher polar fractions in fishes as compared with mammals. The 2D-HPTLC revealed a significant decrease in the relative proportion of alkali-labile gangliosides in the course of evolution from fish to mammals. Moreover this decrease in alkali-lability is correlated with the state of thermal adaptation (antarctic fishes, 53-66%; tropical cichlid fish, 35%). These results provide additional evidence for the notion that the extremely high polarity of brain gangliosides, especially of cold-blooded vertebrates, reflects a very efficient mechanism on the molecular level to keep the neuronal membrane functional under low temperature conditions.

Acclimatization↗
PubMed1982

Organ scaling in mammals: the liver.

1. Values for liver weight, in growing and adult male and female mammals, both terrestrial and aquatic, as well as values for hepatic blood flow, blood volume and oxygen consumption are submitted to linear (log-log) regression analysis. 2. The slope of the regression line for liver weight on adult body weight in adult mammals was found to be 0.886. No statistically significant difference was found between male and female, nor between terrestrial and aquatic mammals (at the 1% confidence level). 3. Over about four orders of magnitude there is (on present evidence) a tendency for the mammalian liver to grow as about the 0.94 power of body weight (pre- and post-natal). 4. The slopes of the regression lines for hepatic blood flow, blood volume and oxygen consumption were found to be 0.91, 0.86 and 0.69, respectively. 5. The mean hepatocyte size in fixed tissue of rats was found to be 7400 micrometers 3. 6. It is argued that the slope of the regression line for hepatic oxygen consumption in mammals generally is likely to fall in the range of 0.67-0.77.

Animals↗
PubMed1995

Bone and fat as a function of body weight in adult mammals.

Three independent data sets, for both bone and fat weight, in adult mammals, expressed as a function of body weight, were submitted to linear regression analysis of the log-log transformed data. For land mammals generally, weighing up to 6.6 metric tons, the slope of the best-fit regression line for skeletal weight is 1.073 +/- 0.021. This regression line underestimates skeletal weight in the elephant by about 40%. For cetaceans, varying in body weight from about 0.1 to over 100 metric tons, the slope of the best-fit regression line for skeletal weight is 1.133 +/- 0.044. Since the slopes for these two groups of mammals are not statistically different, and since cetaceans are normally shielded from gravity, due to buoyancy, it is suggested that the slope (1.073) in land mammals may not be an adaption to gravity. After pooling the data from the three data sets for fat, the resultant regression has a slope of 1.146 +/- 0.026. It is argued, on theoretical grounds, that slopes greater than 1.2-1.3 will not be found for the log-log regression of any major tissue on body weight, taken over the whole mammalian weight range.

Adipose Tissue↗
PubMed2005

Evolution of slow-wave sleep and palliopallial connectivity in mammals and birds: a hypothesis.

Mammals and birds are the only animals that exhibit rapid eye-movement (REM) sleep and slow-wave sleep (SWS). Whereas the electroencephalogram (EEG) during REM sleep resembles the low-amplitude, high-frequency EEG of wakefulness, the EEG during SWS displays high-amplitude, slow-waves (1-4Hz). The absence of similar slow-waves (SWs) in sleeping reptiles suggests that the neuroanatomical and neurophysiological traits necessary for the genesis of SWs evolved independently in the mammalian and avian ancestors. Advances in our understanding of comparative neuroanatomy and the genesis of mammalian SWs suggest that the absence of SWs in reptiles is due to limited connectivity within the pallium, the dorsal portion of the telencephalon that includes the mammalian neocortex, reptilian dorsal cortex and avian Wulst (hyperpallium), as well as the dorsal ventricular ridge in birds and reptiles and the mammalian claustrum and pallial amygdala. In mammals, the slow oscillation (<1Hz) of cortical neurons acts through reciprocal corticothalamic loops and corticocortical connections to synchronize the 1-4Hz activity of thalamocortical neurons in a manner sufficient to generate SWs detectable in the EEG. Given the role that corticocortical (or palliopallial) connections play in the genesis of SWs in mammals, the degree of palliopallial connectivity might explain why birds show SWs and reptiles do not. Indeed, whereas the mammalian neocortex and avian pallium show extensive palliopallial connectivity, the reptilian pallium exhibits limited intrapallial connections. I thus propose that the evolution of SWs is linked to the independent evolution of extensive palliopallial connectivity in mammals and birds. As suggested by experiments functionally linking SWs to performance enhancements, the palliopallial connections that give rise to SWs might also depend on SWs to maintain their efficacy.

Animals↗
PubMed2006

Are GC-rich isochores vanishing in mammals?

Several studies of nucleotide substitution patterns in mammalian species suggested that GC-rich isochores might be vanishing in mammalian genomes. However, the number of genes and the number of genomes included in these studies might not have given a reliable broad view of the trend in GC change in mammals. It is therefore worth exploiting this issue with a broader coverage of mammalian genomes using a reliable approach, the maximum likelihood approach. We have applied two maximum likelihood methods to infer the ancestral GC contents of 176 mammalian genes from representative eutherian species and at least one marsupial species. Except for a large GC decrease in marsupial genes, we found no general decreasing trend in GC content in GC-rich genes or in other genes among eutherian mammals; indeed, the GC content of GC-rich genes appears to have increased in recent times in some genomes, e.g., the rabbit. For the large GC decrease in marsupials, it could be mainly due to the great reduction in chromosome number, which could lead to a large reduction in recombination rate and thus also a large reduction in the rate of gene conversion. Since many eutherian mammals still maintain a fairly large number of chromosomes, it is unlikely that GC-rich isochores are vanishing in these mammals.

Animals↗
PubMed2005

A diagnosis of crocodile feeding traces on larger mammal bone, with fossil examples from the Plio-Pleistocene Olduvai Basin, Tanzania.

Neotaphonomic studies have determined the patterns of bone damage created by larger mammalian carnivores when consuming mammalian carcasses. Typically, mammalian carnivores gnaw and break bones to various degrees in order to access marrow, grease, and brain tissue. In contrast, crocodiles attempt to swallow whole parts of mammal carcasses, inflicting in the process tooth marks and other feeding traces on some of the bones they are unable to ingest. Although crocodiles are major predators of larger mammals along the margins of protected tropical rivers and lakes, their feeding traces on bone have received little systematic attention in neotaphonomic research. We present diagnostic characteristics of Crocodylus niloticus damage to uningested mammal bones resulting from a series of controlled observations of captive crocodile feeding. The resulting bone assemblages are composed of primarily complete elements from articulating units, some of which bear an extremely high density of shallow to deep, transversely to obliquely oriented tooth scores over often large areas of the bone, along with shallow to deep pits and punctures. Some of the tooth marks (bisected pits and punctures, hook scores) have a distinctive morphology we have not observed to be produced by mammalian carnivores. The assemblages are also characterized by the retention of both low- and high-density bone portions, an absence of gross gnawing, and minimal fragmentation. Together, the damage characteristics associated with feeding by crocodiles are highly distinctive from those produced by mammalian carnivores. Modern surface bone assemblages along the Grumeti River in Tanzania's Serengeti National Park contain a mixture of specimens bearing damage characteristic of crocodiles and mammalian carnivores. Comparison of Plio-Pleistocene fossil bones from Olduvai Gorge, Tanzania, to bones damaged by captive and free-ranging Nile crocodiles reveals direct evidence of fossil crocodilian feeding from larger mammal bones associated with Oldowan stone artifacts.

Alligators and Crocodiles↗
PubMed2004

Sexual behavior, reproductive physiology and sperm competition in male mammals.

Sperm competition involves competition between the gametes of two or more males of a species for fertilization of a given set of ova. Sperm competition is widespread among mammals, as in many other groups of vertebrates. Effects of sexual selection, via sperm competition, upon the evolution of reproductive physiology and behavior are much better understood in invertebrates (and especially in insects) than is the case for mammals. However, if the reproductive organs of male mammals are viewed as an integrated system for production and delivery of spermatozoa (and accessory glandular secretions) to females, then it is logical to assume that sperm competition might influence the evolution of all parts of the system, as well as associated physiological mechanisms (e.g., testicular endocrinology) and behavior (e.g., copulatory patterns). Here we analyze and review relationships between mating systems, relative testes sizes and sperm morphology, phallic morphology, circulating testosterone levels and sexual behavior in male mammals.

Animals↗
PubMed1990

Metabolism and the scaling of urine concentrating ability in mammals: resolution of a paradox?

Currently accepted theories of the urine concentrating mechanism of the mammalian kidney predict that concentrating ability should increase with increasing length of the loop of Henle. However, larger mammals have longer nephrons than do smaller ones, yet concentrating ability declines with increasing body mass (M, in kg) as M-0.097. Greenwald & Stetson (1988, News Physiol. Sci. 3, 46-49) have suggested that the diminished concentrating ability of large mammals reflects their lower mass-specific metabolic rate. They propose that, because the urine concentrating mechanism depends upon the energy-dependent transport of sodium chloride, concentrating ability should be closely related to mass-specific metabolic rate. Examination of the allometric scalings with body mass of medullary thickness and metabolic rate indicate that the rate of increase in length of the loop of Henle with body size (M0.129) is insufficient to offset the decline in mass-specific metabolism (M-0.24). The residual product of these scalings (M-0.11) indicates that urine concentrating ability should be inversely related to body size and is similar to the observed allometry of concentrating ability (M-0.097). The decline in concentrating ability of the kidney with body size is probably not a result of inability of the kidney to adapt physiologically or structurally to changes in size, but rather reflects the scaling of the need to conserve water. Small mammals, because of their high rates of evaporative and respiratory water loss, have a much higher rate of water turnover than do large mammals (Vwater.kg-1 alpha M-0.20). Because the need to concentrate the urine diminishes with increasing body size, the increase in loop length need only partially compensate for the simultaneous decline in metabolism.

Animals↗
PubMed2002

An invariant number of the respiratory system of mammals: newborn and adult.

From four empirical allometric equations concerning the dynamics of the respiratory functions of mammals, it has been possible to obtain an invariant and dimensionless number after applying Buckingham's pi-theorem. In the present study, this invariant number (IN(R)), whose origin was interspecies comparisons in mammals of different sizes, was assayed with the aim to compare in a quantitative manner the possible difference between newborn and adult mammals. The results were compared with the predicted values from two theories of biological similarity, one mass-dependent, valid for newborns, and the other, weight-dependent, valid for adult mammals. Finally, we utilized Stahl's residual mass exponents (RME) to test the validity of the empirical and theoretical approaches.

Age Factors↗