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PubMed2005

Influence of body weight, age, and weight gain on fertility and prolificacy in four breeds of ewe lambs.

Breeding ewes to lamb at 1 yr of age can improve profitability for some production systems. The first objective of this study was to evaluate the effect of age and weight at breeding and total postweaning weight gain on reproductive performance of ewe lambs. The second objective was to compare the effects of weight and age variables in four major sheep breeds (Columbia, Polypay, Rambouillet, and Targhee). Weights, ages, and the binary traits of fertility (pregnant or nonpregnant) and prolificacy (one lamb born vs. two or more) were collected on 2,055 ewe lambs at the U.S. Sheep Experiment Station, Dubois, ID, from 1984 through 1988. The effects of age and weight at breeding and total weight gain from weaning to breeding on fertility and prolificacy were analyzed with a logit model in a maximum likelihood analyses. Differences (P < 0.001) among breeds for fertility were identified, with a 93% fertility rate for Polypay ewe lambs compared with lower fertility rates in Columbia, Targhee, and Rambouillet ewe lambs (50, 60, and 75%, respectively). The percentage of multiple births (prolificacy rate) also was higher (P < 0.001) in the Polypay (47%) than in Columbia, Targhee, and Rambouillet breeds (1, 13, and 14%, respectively). Averaged across breeds, weight at breeding had a positive effect on fertility and prolificacy (P < 0.001), whereas total weight gain from weaning to breeding had a positive effect only on fertility (P < 0.027). In separate analyses for each breed, increasing age (P < 0.001) and weight at breeding (P < 0.001) increased the probability of pregnancy in Rambouillet ewe lambs. The probability of pregnancy for Targhee ewe lambs increased (P < 0.005) with weight at breeding. Increasing weight at breeding increased (P < 0.004) the probability of multiple births in all breeds. Increasing total postweaning weight gain increased (P < 0.007) the probabilities of multiple births in Rambouillet and Targhee ewe lambs. In conclusion, Polypay ewe lambs were superior in fertility and prolificacy to Columbia, Rambouillet, and Targhee under Western range conditions. Improved reproductive performance of Columbia, Rambouillet, and Targhee ewe lambs may be achieved by increasing age and weight at breeding and postweaning gain.

Age Factors↗
PubMed2026

A genome-wide assessment of the population structure of thirteen admixed and pure Australian beef cattle breeds.

Knowledge of population structure is a key factor for successful multi-breed genomic prediction, especially in single-step analysis when metafounders are considered. In Australia, current assessments mostly focus on single breeds using a single-step genomic prediction method. However, the effective integration of pedigree, phenotypic, and genomic data in a multi-breed framework still requires further research, especially for combined analyses including admixed and multi-breed populations. This study began with 602,952 genotyped individuals with 8K SNPs in common from 13 beef cattle breeds (Alexandria, Angus, Brahman, Brangus, Charolais, Droughtmaster, Hereford, Kynuna, Limousin, Santa Gertrudis, Shorthorn, Speckle Park, and Wagyu). Due to different numbers of animals being genotyped in each breed, a representative subset of animals was chosen by employing a validated sampling strategy using Gaussian Mixture Models (GMM) complemented by Principal Component Analysis (PCA) within each breed. Subsequently, a specific number of animals in each cluster were randomly selected to capture the entire genetic diversity per breed, with a total of 260 animals from each breed. The first three principal components explained 59.89% of the total variation, with PC1 (33.54%) clearly separating Bos indicus from Bos taurus lineages. Admixture analysis identified stable ancestral components and defined the genetic makeup of both pure and composite populations. The results showed extensive genetic diversity in some breeds and highlighted distinct genetic differences between Bos indicus and Bos taurus breeds. In addition, six composite breeds' admixture levels confirmed their origin and breed history, revealing a directional shift in ancestry proportions by a longitudinal increase in Brahman ancestry within tropical composites over time. Thus, the findings pave the way for more effective utilization of genetic diversity both within and across populations and provide a framework for designing multi-breed genetic evaluations and breeding programs to improve productivity and profitability in Australian beef production.

Animals↗
PubMed1988

Cellularity of organs in mature rams of different breeds.

The relative importance of cell number and cell size in determining the mass of 16 organs and tissues in mature rams of six different breeds was studied through estimation of organ deoxyribonucleic acid (DNA) content. The mean fleece-free empty body weight (FFEBW) ranged from 54.6 +/- 0.3 kg for Camden Park Merinos to 76.7 +/- 1.6 kg for Strong Wool Merinos. For all organs, mass increased with FFEBW, but the relationship was significant across all sheep for only eight organs (blood, kidney, liver, abomasum, vastus lateralis muscle, skin, perirenal fat and triceps muscle). There were significant differences between breeds in the mass of 11 organs. With four (heart, rumen reticulum, small intestine and testicular fat) this difference was independent of breed differences in FFEBW, whereas with another four (kidney, abomasum, vastus lateralis muscle and skin), it was closely related to FFEBW. Breed differences in the mass of the remaining three organs (blood, liver and perirenal fat) were partly related to FFEBW and partly breed specific. Blood mass increased with FFEBW across all animals, but, within a breed, it declined as FFEBW increased. The increase in the mass of perirenal fat with FFEBW was significantly greater within a breed than between breeds. Cell number increased significantly with the mass of all organs except blood and brain. There were between-breed differences in the number of cells in seven organs (liver, heart, rumen reticulum, abomasum, small intestine, vastus lateralis muscle and skin), which, except for heart, were attributable to between-breed differences in organ mass. With heart, the increase in cell number with organ mass within a breed was greater than across all breeds. Cell size was significantly related to organ mass only with vastus lateralis muscle, spleen, perirenal fat and liver. The relationship for vastus lateralis muscle and spleen was negative, indicating that cells were smaller in larger organs. There were differences between breeds in cell size for heart, vastus lateralis and triceps muscles. These differences for heart and triceps muscle were breed specific, whereas for vastus lateralis muscle it was attributed to breed differences in organ weight. There was a 30-fold range in mean cell size across organs, with adipose tissue having the largest cells, muscle tissue intermediate and visceral tissues the smallest. In general, organ mass is positively related to FFEBW. Cell number, not cell size, is largely responsible for differences in organ mass between mature sheep of different breeds.

Adipose Tissue↗
PubMed1996

Effect of vitamins A and E on blood plasma vitamin status and daily body mass gain of different fat-tailed sheep breeds.

Ninety ram lambs of three Iranian fat-tailed sheep breeds including the Shal breed (age: 4-6 months) in one experiment and the Sanjabi and Bakhtiari breeds (6-9 months) in another experiment were assigned to five groups of 5-7 lambs each to receive a basal diet plus different levels of vitamins A and E supplementation. The groups received 0, 50 or 100 IU vitamin A/kg body mass (b.m.) and 0, 15 or 30 IU vitamin E/kg of diet. In the vitamin A groups a constant level of 15 IU vitamin E and in the vitamin E groups a constant level of 50 IU vitamin A supplementation was provided. Blood plasma samples were taken at the beginning and at the end of the experiments and the concentrations of vitamins A and E were determined by high-performance liquid chromatography (HPLC). Vitamin A supplementation of the highest level (100 IU/kg b.m.) significantly increased the retinol content of the blood plasma in the Shal (P < 0.01) and Bakhtiari (P < 0.05) breeds. The mild increase of retinol concentration in the Sanjabi breed was not significant (P > 0.05). Vitamin A supplementation greatly decreased the alpha-tocopherol content of the blood plasma in all three breeds (P < 0.01). It increased the average daily body mass gain of lambs of the Shal breed (P < 0.01) but decreased that of Bakhtiari lambs (P < 0.05). Supplementation of vitamin E mildly decreased the retinol content of the blood plasma in all the breeds and the decrease was statistically significant (P < 0.05) for the Shal breed at the highest dose level. Vitamin E supplementation greatly increased the alpha-tocopherol concentration of the blood plasma in all the breeds (P < 0.01-0.001). It decreased the average daily body mass gain of the Shal breed (P < 0.001) but improved it in the two other breeds. That increase was statistically significant (P < 0.05) in the Bakhtiari breed. It was concluded that the Shal breed gave a better response to vitamin A supplementation while the Sanjabi and Bakhtiari breeds to vitamin E. This indicates that fat-tailed breeds have dissimilar requirements for vitamins A and E supplementation. A higher level of vitamin E intake is required for raising the alpha-tocopherol content of the blood plasma above the level critical for sheep (0.8 microgram/ml).

Animals↗
PubMed2006

Genetic diversity within and between European pig breeds using microsatellite markers.

An important prerequisite for a conservation programme is a comprehensive description of genetic diversity. The aim of this study was to use anonymous genetic markers to assess the between- and the within-population components of genetic diversity for European pig breeds at the scale of the whole continent using microsatellites. Fifty-eight European pig breeds and lines were analysed including local breeds, national varieties of international breeds and commercial lines. A sample of the Chinese Meishan breed was also included. Eleven additional breeds from a previous project were added for some analyses. Approximately 50 individuals per breed were genotyped for a maximum of 50 microsatellite loci. Substantial within-breed variability was observed, with the average expected heterozygosity and observed number of alleles per locus being 0.56 [range 0.43-0.68] and 4.5 respectively. Genotypic frequencies departed from Hardy-Weinberg expectations (P < 0.01) in 15 European populations, with an excess of homozygotes in 12 of them. The European breeds were on average genetically very distinct, with a Wright F(ST) index value of 0.21. The Neighbour-Joining tree drawn from the Reynolds distances among the breeds showed that the national varieties of major breeds and the commercial lines were mostly clustered around their breeds of reference (Duroc, Hampshire, Landrace, Large White and Piétrain). In contrast, local breeds, with the exception of the Iberian breeds, exhibited a star-like topology. The results are discussed in the light of various forces, which may have driven the recent evolution of European pig breeds. This study has consequences for the interpretation of biodiversity results and will be of importance for future conservation programmes.

Alleles↗
PubMed1990

Performance of crosses among Hereford, Angus and Simmental cattle with different levels of Simmental breeding: V. Calf production, milk production and reproduction of three- to eight-year-old dams.

Measures of maternal productivity and reproduction of Hereford (HH), Angus-Hereford (AH), 25% Simmental-75% Hereford (1S3H), 50% Simmental-50% Hereford (1S1H) and 75% Simmental-25% Hereford (3S1H) dams were studied. Half of each dam breed group was bred to Tartentaise and half to Charolais sires to produce 706 calves at weaning from 930 exposures to breeding in a Montana range environment. Data were analyzed according to a model that included the fixed effects of year, dam breed group, dam age, calf sex, calf sire breed, plus appropriate two-way interactions, linear partial regression on calf birth date and random effects of sire within dam breed group (maternal grandsire of the calf) and sire within calf sire breed. Calf sex interacted with calf sire breed for several traits, but interactions were due to changes of magnitude of differences between sexes. There were no significant interactions of dam breed group with other main effects for calf growth traits, except for the interaction with calf sire breed for some calf growth traits. This interaction was due to a change in magnitude; it suggested that larger sire breeds should be matched to larger dam breeds with greater potential for milk production. The only significant interaction for traits that included reproduction of the dam was dam breed group X age of dam. Ranking of dam breed groups depended on age at measurement. Differences among dam breed groups were significant for most traits. Calf weaning weights for HH, AH, 1S3H, 1S1H and 3S1H dams were 211, 223, 227, 237 and 243 kg, respectively; calf weaning weights per cow exposed were 157, 163, 179, 189 and 169 kg; calf weaning weights per unit of dam weight were .40, .41, .43, .44 and .42, respectively. Thus, dam breed groups that weaned the largest calves were not necessarily the most productive under Montana range conditions.

Animals↗
PubMed2002

Preliminary results on the use of diagnostic ultrasonography as a management tool to quantify egg production potential in breeding ostrich (Struthio camelus australis) females.

An ostrich breeding flock, joined as individual breeding pairs (n = 136 pairs), was used to investigate the possibility of diagnostic ultrasonography as a method to predict the reproductive performance of ostrich females during a breeding season. Follicular activity was easily detected and quantified by using diagnostic ultrasonography. One to 8 follicles were recorded in 25% of females scanned at the beginning of the 9-month breeding season. At the end of the breeding season, 1-3 follicles were observed in 28.7% females. Females in which follicular activity was observed came into production earlier than those in which no follicles were observed, with the mean (+/- SE) number of days to the production of the 1st egg being 22.3 +/- 12.5 and 87.4 +/- 7.2 days, respectively. Females in which follicular activity was observed at the beginning of the breeding season, produced on average 181% more eggs during the 1st month of the breeding season (P < 0.01) than females in which no follicular activity was observed (6.67 +/- 0.70 vs 2.37 +/- 0.41 eggs). Egg production over the first 2 months of breeding and over the entire breeding season were similarly affected (P < 0.01), with the mean number of eggs produced over the first 2 months of the breeding season being 14.7 +/- 1.5 for females with observed follicular activity and 7.4 +/- 0.9 eggs for females with no observed follicular activity. Females in which follicular activity was observed at the end of the breeding season produced on average 108% more eggs (P < 0.01) during the last month of the breeding season than females in which no follicular activity was observed (2.77 +/- 0.43 vs. 1.33 +/- 0.27 eggs). There was a tendency (P = 0.06) for egg production over the last 2 months to be similarly affected (6.10 +/- 0.85 vs 4.19 +/- 0.54 eggs). No relationship with egg production over the entire breeding season was found for the end-of-the-breeding-season observations. Diagnostic ultrasonography can thus be used as a management tool to identify reproductively healthy ostrich females and also females with a higher egg production potential over a period of 2 months after or prior to assessment. Future studies should focus on the development of the technique to predict reproductive performance over entire breeding seasons for selection purposes.

Animals↗
PubMed2000

[Mendelism in animal breeding as developed by professor Leopold Frateur, Louvain (1877-1946)].

Educated as a veterinarian at Cureghem, Leopold Frateur started his scientific career in 1899 as a professor at the Faculty of Sciences of the Catholic University of Louvain, Belgium, in charge of the course in zootechnology. After a study tour to zootechnical institutes and centres of animal breeding in Europe he was invited by the governmental department of Agriculture and the Belgian Society of Zootechnology to investigate the relevance of the Mendelian laws of heredity for the improvement of cattle breeding. In the early years of the century, Frateur conducted field research in order to determine the characteristics of the cattle breeds in Belgium. In 1908 Frateur founded the Institute of Animal Husbandry at his university. Here he worked out his programme of experimental genetics until his retirement in 1936. The last six years of his professorship he teached also agricultural economics in the Faculty of Economical Sciences. In Frateur's experimental research the following main lines can be distinguished: 1) The analysis of simple and complex hereditary factors in cattle, rabbits and poultry; 2) The study of qualitative and quantitative characteristics of importance for the improvement of animal breeds; 3) The synthesis of genetic factors from different stock in order to obtain higher yielding breeds with stable characteristics; 4) Theoretical study of the relationship between genotype and phenotype and the influence of environment factors; 5) Theoretical exploration of the issue of variability and modification of newly formed characteristics; 6) Research leading to an explanation of telegony and atavism; 7) The formulation of a theory on the creation of new breeds in domestic animals and plants, and the relation between breed and species. Also he was responding to topical needs, e.g. he determined the causal factor of pullorum epidemic in chicken farming, or he investigated the hereditary resistance against diphteric infection amongst chickens. Frateur took the theoretical knowledge on heredity as the starting point for practical application in cattle breeding. During and right after W. W. I. he stated that the current scientific knowledge is enough advanced to consider the start of a large breeding programme for the improvement of cattle livestock. In order to realise this reinstatement Frateur received important support from the authorities (Royal Decree, August 1919). From then onwards he focussed his efforts on the realisation of a national framework for improvement of cattle livestock, in collaboration with regional centres and societies for animal selection, breeding and production. Later he also started programmes for the improvement of chicken and pig breeding, again in a joint effort with official consultants and members of breeding societies. He was not only the architect of these programmes, providing the necessary scientific and technical guidance, but he had also a chair in the governing bodies, supervising the execution and control of the breeding programmes. In order to draw a picture of the research community engaged in animal breeding during the first decennia of the 20th century Frateur's contacts through study tours, congresses and learned societies are investigated. The life and work of Frateur is described by the author in two volumes, published in 1999. The second volume consists of a reprint of 50 selected papers on animal breeding.

Animals, Genetically Modified↗
PubMed2003

Research on the genetic variations of a1-fucosytransferase (FUT1) gene in 26 pig breeds.

Enterotoxigenic Escherichia coli F18(ECF18) is a main pathogen that causes edema disease and post-weaning diarrhoea in piglets, and al-fucosytransferase (FUT1) gene has been identified as a candidate gene for controlling the expression of the receptor for ECF18 bacteria. The genetic variations at position 307 nucleotide in open reading frame of FUT1 gene in 26 pig breeds (total 1458 individuals) from 5 western commercial pig breeds and 21 Chinese native pig breeds were investigated by PCR-RFLP. The results showed that the genetic polymorphisms of the FUT1 locus were only detected in 5 western pig breeds and the Chinese Lingao pig breed, 5 western pig breeds possessed 3 different genotypes, and Lingao pig breed had two susceptible genotypes GG and AG, while all the other 20 Chinese native pig breeds only presented the susceptible genotype GG. The results indicated that if M307G-A point mutation in the coding region of FUT1 gene was the key factor determining the expression of the ECF18 receptor, most of Chinese native pig breeds were absent of the genetic background on the resistance to ECF18 bacteria. In this case, it was inferred that the resistance gene to ECF18 might be originated from western pig breeds. In addition, it is of great importance for the conservation of Lingao pig breed as it is the only found Chinese native pig breed possessing resistance M307A allele in FUT1 gene. Generally, compared with exotic pig breeds, Chinese native pig breeds have stronger resistance to edema disease and post-weaning diarrhoea in piglets. The results suggested that further study should be done to identify and characterize putative QTL (quantitative trait locus) or/and the functional gene responsible for the resistance to ECF18 in Chinese native pig breeds.

Alleles↗
PubMed1981

[Biochemical parameters of blood sera from clinically healthy boars of the Large White, Landrace and Duroc breeds].

The levels of eleven biochemical parameters were determined in the blood serum of 150 healthy breeding boars of the Large White, Landrace and Duroc breeds from three A. I. stations. The following average values were obtained: calcium 1.94 +/- 0.42 mmol . l-1 with a statistically significant difference of the means between the LW and L breeds, phosphorus 1.87 +/- 0.31 mmol . l-1 with a statistically significant difference of the means between the LW and L breeds, magnesium 0.61 +/- 0.12 mmol . l-1 with a statistically significant difference of the means between the LW and D breeds, iron 25.98 +/- 5.41 micron mol . l-1 without statistically significant inter-breed differences, chlorides 97.75 +/- 7.04 mmol . l-1 without statistically significant inter-breed differences, alkaline phosphatase 55.97 +/- 24.72 U . l-1 without statistically significant inter-breed differences, transaminase GOT 14.96 +/- 4.86 U . l-1 with statistically significant differences of the means in the D breed compared with LW and L, transaminase GPT 27.75 +/- 6.65 U . l-1 without statistically significant inter-breed differences, total protein 75.00 +/- 5.82 g . l-1 without statistically significant inter-breed differences, total protein 75.00 +/- 5.82 g . l-1 with a statistically significant difference between the LW and L breeds, creatinin 203.67 +/- 27.97 micron mol . l-1 with statistically significant differences of the means in the L breed compared with LW and D, and urea 5.55 +/- 1.22 mmol . l-1 with a statistically significant difference of the means between the LW and L breeds. It is recommended for clinical practice to respect inter-breed differences in parameters specially mentioned in discussion.

Animals↗
PubMed1990

Two-, three- and four-breed rotational crossbreeding of beef cattle: reproductive traits.

Reproductive data were collected on 4,596 cow exposures in a rotational crossbreeding study that spanned four generations (1970 through 1988). Angus (A), Brahman (B), Charolais (C) and Hereford (H) breeds were included in three two-breed (A-B, C-B and H-B), three three-breed (A-B-C, A-B-H and C-H-B) and one four-breed (A-B-C-H) rotational mating system. Contemporary straightbreds were produced each generation. Reproductive traits of interest were calving rate, calf survival, weaning rate, calf birth date and calving assistance. Overall means and standard errors for calving rate, calf survival, weaning rate, calf birth date and calving assistance were 82.1 +/- .6%, 92.8 +/- .4%, 76.2 +/- .6%, 50.4 +/- .3 d and 4.2 +/- .3%, respectively. Rotational mating systems had similar calving and calf survival rates that were greater (P less than .01) than those of straightbreds. Three- and four-breed rotation systems had similar weaning rates (81.5 +/- 1.1 and 80.8 +/- 2.0%) that were higher than those for two-breed rotations (77.1 +/- 1.2%). Two- and three-breed rotation systems had fewer assisted births (3.5 +/- .6 and 2.2 +/- .6%) than straightbreds (5.5 +/- .6%) and the four-breed rotation (5.4 +/- 1.0%). Three-breed rotation calves were born earlier in the calving season (46.8 +/- .6 d; P less than .05) than straightbred, two-breed or four-breed rotation calves (51.8 +/- .6, 52.1 +/- .6 and 51.1 +/- 1.0 d). Hereford-Brahman two-breed rotation cows had higher (P less than .05) calving and weaning rates than A-B or C-B two-breed rotation cows (87 +/- .4 vs 81.9 +/- 1.9 and 81.5 +/- 1.8%; 81.7 +/- 2.0 vs 76.4 +/- 2.1 and 74.1 +/- 2.0%). All three-breed rotation combinations had similar calving, calf survival and weaning rates, assistance at calving and calf birth dates. Rotational combinations tended to be more superior (P less than .05) to weighted purebred means for calving, calf survival and weaning rates than for calf birth date and calving assistance.

Analysis of Variance↗
PubMed2004

Evaluation of Dorset, Finnsheep, Romanov, Texel, and Montadale breeds of sheep: II. Reproduction of F1 ewes in fall mating seasons.

Objectives were to estimate effects of sire breed (Dorset, Finnsheep, Romanov, Texel, and Montadale), dam breed (Composite III and northwestern whiteface), mating season (August, October, and December), ewe age (1, 2, and 3 yr), and their interactions on reproductive traits of F1 ewes. A total of 1,799 F1 ewes produced 3,849 litters from 4,804 exposures to Suffolk rams during 35-d mating seasons over 3 yr. Ewes were weighed at breeding. Conception rate and ewe longevity (present or absent at 42 mo of age) were determined. Number born and litter birth weight were recorded, and number and weight at weaning and 20 wk of age were analyzed separately for dam- and nursery-reared litter mates. Total productivity through 3 yr of age for each ewe entering the breeding flock was calculated as the sum of 20-wk weights for dam- or nursery-reared lambs. Interactions of sire breed x mating season, sire breed x ewe age, and mating season x ewe age were generally significant, whereas interactions of sire breed, mating season, and ewe age x dam breed were seldom detected. Interactions of sire breed x mating season were often due to changes in rank as well as magnitude, indicating the importance of matching sire breed to a specific mating season. The number born to Dorset-, Texel-, and Montadale-sired ewes was not affected by dam breed; however, Finnsheep-sired ewes out of northwestern whiteface dams were more prolific than Finnsheep-sired ewes out of Composite III dams, and the opposite situation existed for Romanov-sired ewes. Least squares means of sire breeds (P < 0.001) for total productivity of dam-reared lambs were 98.5, 103.5, 106.9, 124.6, and 154.9 kg/ewe entering the breeding flock for Texel, Dorset, Montadale, Finnsheep, and Romanov, respectively. Superior reproduction of Romanov-sired ewes was due to greater conception rate and prolificacy for each mating season and ewe age, as well as greater ewe longevity. Total productivity of F1 ewes by Composite III dams (125.6 kg) was greater (P < 0.001) than for ewes born to northwestern whiteface dams (109.7 kg), and the effect of mating season increased (P < 0.001) from August to October to December. Litter weight at 20 wk of age of 2- and 3-yr-old ewes was similar but greater (P < 0.001) than for 1-yr-old ewes. Experimental results provide comprehensive information about the appropriate use of these breeds in crossbreeding systems to meet specific production-marketing objectives.

Age Factors↗
PubMed2006

Statistical analysis of individual assignment tests among four cattle breeds using fifteen STR loci.

Assignment tests based on multilocus genotypes are becoming increasingly important to certify quality and origin of livestock products and assure food safety and authenticity. The purpose of this study was to determine the potential of microsatellites (STR) for determining the breed origin of beef products among cattle breeds present in the market. We typed 19 STR in 269 animals from 4 cattle breeds. Based on Wright's F-statistics, 4 loci were discarded, and the remaining 15 loci (FIT = 0.101, FST = 0.089, and FIS = 0.013) were used to compute the likelihood that each multilocus genotype of the total sample was drawn from its true breed instead of another breed. To avoid occurrence of zero likelihood when one or more alleles were missing from a tested breed, sample allele frequencies were estimated assuming uniform prior distributions. Log-likelihood ratio [log(LR)] distributions of the individual assignments were determined for all possible breed contrasts, and their means and SD were used to infer the true-positive and false-positive rates at several values of the log(LR). The posterior probability that the animals of a presumed breed were actually drawn from that breed instead of any another breed was then calculated. Given an observed value of log(LR) > 0 and assuming equal priors, these probabilities were > 99.5% in 10 of 12 possible breed contrasts. For the 2 most closely related breeds (FST = 0.041), this probability was 96.3%, and the probability of excluding the origin of an animal from an alleged breed when it was actually derived from another breed was similar.

Animals↗
PubMed1995

Sex differences in the expression and antagonism of swim stress-induced analgesia in deer mice vary with the breeding season.

Swim stress-induced analgesia (SSIA) was examined in photoperiodically induced 'breeding' (reproductive) and 'non-breeding' (non-reproductive) adult male and female deer mice, Peromyscus maniculatus. Nociceptive responses (50 degrees C, hot-plate) of breeding and non-breeding deer mice were determined after either a 1- or 3-min swim in 20 degrees C water. The 1-min swim induced an immediate and relatively short-lasting naloxone (1.0 mg/kg) insensitive 'non-opioid' -mediated SSIA that was antagonized by the N-methyl-D-aspartate (NMDA) antagonist, MK-801 (0.10 mg/kg) in all of the groups of mice except the breeding (reproductive) females. Breeding females displayed a non-opioid analgesia that was insensitive to MK-801. The 3-min swim induced a relatively more prolonged mixed opioid and 'non-opioid' SSIA of which the initial portion was sensitive to antagonism by MK-801 in all groups of the mice except the breeding females, while the latter portion (15 min after swim) was induced by naloxone in all of the groups of mice. Overall, the breeding males displayed greater levels of SSIA than the breeding females, with no consistent sex differences in the non-breeding mice. Within sexes, the breeding males displayed greater levels of opioid and non-opioid SSIA than the non-breeding males, while the non-breeding females displayed greater levels of SSIA than the breeding females. These results show that both sex and reproductive status affect the expression and neurochemical mediation of non-opioid SSIA. These findings also suggest that reproductive females may have an unique or novel hormonally (estrogen) dependent mechanism associated with the expression of SSIA.

Analgesia↗
PubMedDate not supplied

Prevalence of the breed-related glaucomas in pure-bred dogs in North America.

OBJECTIVE: To determine the prevalence of the breed-related glaucomas in pure-bred dogs presented to the veterinary medical teaching hospitals in North America that participate in the Veterinary Medical Data Base (VMDB). MATERIALS AND METHODS: In this retrospective study, age of first diagnosis, breed, and gender data for all breeds of dogs were collected from the VMDB with the clinical diagnosis of primary glaucoma (glaucoma-NOS) at 5-10 year intervals from 1964 to 2002. The prevalence for each breed (affected dogs compared to all dogs of each breed), any changes over the 38 years, and any gender differences for these glaucomas were determined. RESULTS: The prevalence of the primary breed-related glaucomas has gradually increased from 0.29% (1964-1973); 0.46% (1974-1983); 0.76% (1984-1993); to 0.89% (1994-2002). Breeds that consistently featured among the highest 10 for glaucoma prevalence from four different periods (1964 to 2002) included American Cocker Spaniel, Basset Hound, Wire Fox Terrier, and Boston Terrier. During the last observation period (1994-2002), 22 different breeds had 1% or higher prevalence of the glaucomas. The highest prevalence of glaucomas in 1994-2002 by breed included: American Cocker Spaniel (5.52%); Basset Hound (5.44%); Chow Chow (4.70%); Shar-Pei (4.40%); Boston Terrier (2.88%); Wire Fox Terrier (2.28%); Norwegian ElkHound (1.98%); Siberian Husky (1.88%); Cairn Terrier (1.82%); and Miniature Poodle (1.68%). A predominance of females with glaucoma occurred in the American Cocker Spaniel, Basset Hound, Cairn Terrier, Chow Chow, English Cocker Spaniel, Samoyed, and perhaps the Siberian Husky, and a predominance of males in the Australian Cattle dog and St Bernard. Age affected the time for first presentation of the glaucomas in the pure-bred dog. In the majority of breeds the glaucomas were presented for initial diagnosis in dogs between 4 and 10 years of age. CONCLUSION: Breed-related glaucomas in pure-bred dogs are frequently presented to the veterinary medical teaching hospitals in North America. The prevalence of the breed-related glaucomas in the dog appears similar to humans, and in some breeds exceeds that in humans. In many breeds the high prevalence of the glaucomas suggests a genetic basis.

Animals↗
PubMedDate not supplied

Genetic diversity of eleven European pig breeds.

A set of eleven pig breeds originating from six European countries, and including a small sample of wild pigs, was chosen for this study of genetic diversity. Diversity was evaluated on the basis of 18 microsatellite markers typed over a total of 483 DNA samples collected. Average breed heterozygosity varied from 0.35 to 0.60. Genotypic frequencies generally agreed with Hardy-Weinberg expectations, apart from the German Landrace and Schwäbisch-Hällisches breeds, which showed significantly reduced heterozygosity. Breed differentiation was significant as shown by the high among-breed fixation index (overall F(ST)= 0.27), and confirmed by the clustering based on the genetic distances between individuals, which grouped essentially all individuals in 11 clusters corresponding to the 11 breeds. The genetic distances between breeds were first used to construct phylogenetic trees. The trees indicated that a genetic drift model might explain the divergence of the two German breeds, but no reliable phylogeny could be inferred among the remaining breeds. The same distances were also used to measure the global diversity of the set of breeds considered, and to evaluate the marginal loss of diversity attached to each breed. In that respect, the French Basque breed appeared to be the most "unique" in the set considered. This study, which remains to be extended to a larger set of European breeds, indicates that using genetic distances between breeds of farm animals in a classical taxonomic approach may not give clear resolution, but points to their usefulness in a prospective evaluation of diversity.

Journal Article↗
PubMedDate not supplied

Genetic variation and relationships of eighteen Chinese indigenous pig breeds.

Chinese indigenous pig breeds are recognized as an invaluable component of the world's pig genetic resources and are divided traditionally into six types. Twenty-six microsatellite markers recommended by the FAO (Food and Agriculture Organization) and ISAG (International Society of Animal Genetics) were employed to analyze the genetic diversity of 18 Chinese indigenous pig breeds with 1001 individuals representing five types, and three commercial breeds with 184 individuals. The observed heterozygosity, unbiased expected heterozygosity and the observed and effective number of alleles were used to estimate the genetic variation of each indigenous breed. The unbiased expected heterozygosity ranged between 0.700 (Mashen) and 0.876 (Guanling), which implies that there is an abundant genetic variation stored in Chinese indigenous pig breeds. Breed differentiation was shown by fixation indices (FIT, FIS, and FST). The FST per locus varied from 0.019 (S0090) to 0.170 (SW951), and the average FST of all loci was 0.077, which means that most of the genetic variation was kept within breeds and only a little of the genetic variation exists between populations. The Neighbor-Joining tree was constructed based on the Nei DA (1978) distances and one large cluster with all local breeds but the Mashen breed, was obtained. Four smaller sub-clusters were also found, which included two to four breeds each. These results, however, did not completely agree with the traditional type of classification. A Neighbor-Joining dendrogram of individuals was established from the distance of -ln(proportions of shared alleles); 92.14% of the individuals were clustered with their own breeds, which implies that this method is useful for breed demarcation. This extensive research on pig genetic diversity in China indicates that these 18 Chinese indigenous breeds may have one common ancestor, helps us to better understand the relative distinctiveness of pig genetic resources, and will assist in developing a national plan for the conservation and utilization of Chinese indigenous pig breeds.

Alleles↗
PubMed2003

Testicular measurements and daily sperm output of Tori and Estonian breed stallions.

Evaluation of testicular measurements and daily sperm output (DSO) yields valuable information for predicting the reproductive capacity of stallions. The present study evaluated testicular measurements (height, length, width and circumference) and DSO of eight Tori and eight Estonian breed stallions. One ejaculate of semen was collected daily for 10 subsequent days from each stallion. The gel-free volume of semen was measured with a graduated glass cylinder and the sperm concentration was assessed with a Chorjajev chamber. The volume of gel-free fraction was multiplied by the sperm concentration to give the total number of spermatozoa (TSN). The DSO was calculated as mean TSN of collection on days 8-10 in Tori breed stallions and on days 4-10 in Estonian breed stallions. The DSO of Tori breed stallions was 12.9 x 109 spermatozoa and of Estonian breed stallions 4.5 x 109 spermatozoa (p < 0.001). Testicular measurements (in cm) 1 day after the last semen collection were as follows: left testis- height 7.3, length 10.4 and width 7.3 in Tori breed stallions, and 5.9, 8.1 and 5.9, respectively, in Estonian breed stallions; right testis- height 7.4, length 10.6 and width 7.4 in Tori breed stallions, and 5.5, 7.4 and 5.3, respectively, in Estonian breed stallions. All these testicular measurements were significantly smaller in Estonian than in Tori breed stallions (p < 0.001). Testicular circumference was 45.4 and 35.4 cm in Tori and Estonian breed stallions, respectively (p < 0.001). The testicular circumference was correlated with DSO in both Estonian (p < 0.05) and Tori breed stallions (p = 0.071). The results give us valuable information on the reproductive capacity of Tori and Estonian breed stallions.

Animals↗