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PubMed1999

Signal-mediated nuclear transport in the amoeba.

The evolutionary changes that occur in signal-mediated nuclear transport would be expected to reflect an increasing need to regulate nucleocytoplasmic exchanges as the complexity of organisms increases. This could involve changes in both the composition and structure of the pore complex, as well as the cytosolic factors that mediate transport. In this regard, we investigated the transport process in amoebae (Amoeba proteus and Chaos carolinensis), primitive cells that would be expected to have less stringent regulatory requirements than more complex organisms. Colloidal gold particles, coated with bovine serum albumin (BSA) conjugated with simple (large T) nuclear localization signals (NLSs), bipartite (nucleoplasmin) NLSs or mutant NLSs, were used to assay nuclear import. It was found that in amoebae (1) the diameter of the particles that are able to enter the nucleoplasm is significantly less than in vertebrate cells, (2) the simple NLS is more effective in mediating nuclear import than the bipartite NLS, and (3) the nucleoporins do not appear to be glycosylated. Evidence was also obtained suggesting that, in amoebae, the simple NLS can mediate nuclear export.

3T3 Cells↗
PubMed1978

The pattern of appearance of enzymic activity during the development of the Golgi apparatus in amoebae.

The appearance of enzymic activity during the development of the Golgi apparatus was studied by cytochemical staining of renucleated amoebae. In cells enucleated for 4 days, there was a great decline in size and number of Golgi bodies, or dictyosomes. Subsequent renucleation by nuclear transplantation resulted in a regeneration of Golgi bodies. Samples of amoebae were fixed and incubated for cytochemical staining at intervals of 1, 6, or 24 h after renucleation. Enzymes selected for study were guanosine diphosphatase (GDPase), esterase, and thiamine pyrophosphatase (TPPase). All three were found in the Golgi apparatus of normal amoebae but they differed in their overall intracellular distribution. GDPase was normally present at the convex pole of the Golgi apparatus, in rough endoplasmic reticulum, and in the nuclear envelope. In amoebae renucleated for 1 h, light reaction product for GDPase was present throughout the small stacks of cisternae that represented the forming Golgi apparatus. By 6 h following the operation GDPase reaction product was concentrated at the convex pole of the Golgi apparatus. Esterase, which was distributed throughout the stacks of normal Golgi cisternae, displayed a similar distribution in the forming Golgi bodies as soon as they were visible. TPPase was normally present in the Golgi apparatus but was not found in the endoplasmic reticulum. In contrast to the other enzymes, TPPase reaction product was absent from the forming Golgi apparatus 1 and 6 h after renucleation, and did not appear in the Golgi apparatus until 24 h after operation. Thus, enzymes held in common between the rough endoplasmic reticulum and the Golgi apparatus were present in the forming Golgi apparatus as soon as it was detectable, but an enzyme cytochemically localized to the Golgi apparatus only appeared later in development of the organelle. It is suggested that Golgi membranes might be derived from the endoplasmic reticulum and thus immediately contain endoplasmic reticulum enzymes, while Golgi-specific enzymes are added later in development.

Amoeba↗
PubMed1980

Structural responses of amoebae to the injection of heterologous cytoplasm.

Responses to the introduction of heterologous cytoplasm and the fate of foreign organelles were investigated in amoebae. Heterologous cytoplasm was transferred by microinjection from Pelomyxa carolinensis to Amoeba discoides. In control experiments, homologous cytoplasm was transferred from one A. discoides to another. Recipient cells were observed by light microscopy, and samples were prepared for ultrastructural study at intervals between 15 min nad 3 days after operation. Recipients of heterologous cytoplasm showed two main responses. First, about 40% recipients expelled small amounts of cytoplasm by a blebbing process within 30 min after injection. Second, organelles were segregated and broken down in membrane-bounded cytoplasmic vacuoles between 6 h and 2 days after operation. Acid phosphatase reaction product was observed in these vacuoles along with altered organelles. Use of electron-dense thoria particles to mark donor cells demonstrated the presence of injected cytoplasm in the vacuoles. In contrast, when amoebae were injected with homologous cytoplasm, none was expelled and vacuoles containing degenerating organelles were uncommon. The survival rate and general appearance of recipients of heterologous cytoplasm were much poorer than those of homologous recipients, and most of the former died by I week after operation. It is postulated that amoeba are capable of recognizing heterologous organelles introduced into the cytoplasm and that they respond by expulsion and/or destruction of the foreign cellular components. The previously described lethal effect of heterologous cytoplasm was confirmed.

Amoeba↗
PubMed2006

Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens.

The recently sequenced Rickettsia felis genome revealed an unexpected plasmid carrying several genes usually associated with DNA transfer, suggesting that ancestral rickettsiae might have been endowed with a conjugation apparatus. Here we present the genome sequence of Rickettsia bellii, the earliest diverging species of known rickettsiae. The 1,552,076 base pair-long chromosome does not exhibit the colinearity observed between other rickettsia genomes, and encodes a complete set of putative conjugal DNA transfer genes most similar to homologues found in Protochlamydia amoebophila UWE25, an obligate symbiont of amoebae. The genome exhibits many other genes highly similar to homologues in intracellular bacteria of amoebae. We sought and observed sex pili-like cell surface appendages for R. bellii. We also found that R. bellii very efficiently multiplies in the nucleus of eukaryotic cells and survives in the phagocytic amoeba, Acanthamoeba polyphaga. These results suggest that amoeba-like ancestral protozoa could have served as a genetic "melting pot" where the ancestors of rickettsiae and other bacteria promiscuously exchanged genes, eventually leading to their adaptation to the intracellular lifestyle within eukaryotic cells.

Actins↗
PubMed1994

Ecology of free-living amoebae.

Small free-living amoebae (FLA) are the main predators controlling bacterial populations in soils. They are distributed in the rhizospheric zone and the surrounding bulk soil; however, they may spread deeper, reaching the vadose zone of groundwater systems, especially where bacterial populations get to high densities. Soil texture is the physical factor controlling the distribution of FLA because it determines the mean bore pore of soil aggregates and other important physical factors. FLA help maintain the high bacterial mineralization rate of organic matter through predation. As attachment onto a surface is necessary for feeding, the quantity of available surfaces is very important for developing this activity. However, the role of protozoa on plant growth promotion is still unclear because they may increase this effect by feeding on both fungi and bacteria. Small FLA are found in soils or sediments, as well as attached to suspended particulate matter in water columns, in the first 30 microns of water surface, or on the bodies of submerged animals and plants. These microorganisms do not distinguish between terrestrial or aquatic environments because they live in the interfaces between them. However, their importance in aquatic systems has been considered as negligible because they are outcompeted by free swimmers. The water conditions affecting amoebae survival are pH, temperature, concentration of sulfhydric acid and salinity. These factors have a strong influence on the structure of amoebae communities in aquatic environments. FLA are considered cosmopolitan as a group, and they live inside vertebrates, in soils, freshwater, marine waters, and on the aerial parts of plants and animals. These microbes, are spread by wind and water currents. Once in the air, cysts and trophozoites behave like any other suspended particulate matter. Therefore, suspension transportation, and removal depend on atmospheric dynamics rather than on their own mechanisms. Ultraviolet light and drought are the main causes of losing viability, but much needs to be learned about the effects of air contaminants on amoebal survival. Naked amoebae also live in the phyllosphere as part of phylloplane community, but their importance and participation in this environment remain unknown. Some species belonging to the genera Acanthamoebae, Naegleria, and Balamuthia cause fatal diseases in humans and are carriers of other pathogens such as Legionella pneumophilia. However, FLA communities can be of some utility in sewage treatment works based in soil filters. FLA's predatory activity in the root zone method may be of greater importance than previously thought, because this is their natural or more favorable environment.(ABSTRACT TRUNCATED AT 400 WORDS)

Amoeba↗
PubMed1991

[DNA hyperreplication in the nuclei of Amoeba borokensis in the cell cycle].

The relative nuclear DNA contents were determined cytofluorometrically for several groups of synchronized Amoeba borokensis at the early and late interphase. In some groups of these amoebae the nuclear DNA content by the end of the interphase exceeded more than twice that measured 1 h after division, when DNA in amoebic nuclei already being synthesized. This means that the extra DNA was synthesized in the nuclei of amoebae of these particular groups. In other amoebic groups the nuclear DNA content checked at the end of the interphase did not exceed the doubled 1 h level. Thus, in these amoebae the quantity of the synthesized extra DNA was less than that in the former groups, or the extra DNA was not synthesized at all.

Amoeba↗
PubMed1979

[Microspectrophotometric study of the crystalline inclusions in different strains of Amoeba proteus].

Using microspectrometric technique, integral extinction and extinction spectra of crystalline inclusions of two amoeba strains, C and Ct, have been studied. The analysis of extinction spectrum form allowed to suggest that the crystals seen in both amoeba strains have identical chemical composition, whereas the morphological differences between cells in their transparency may be due to different mode of the crystal package. The relative amount of the crystals was measured in both amoeba strains on the basis of the integral extinction value. The distinct differences between the strains were detected in the integral extinction value and in the extinction spectra, which allowed us to use these parameters as genetic markers in the experiments on the nuclear transplantation in amoeba.

Amoeba↗
PubMed1980

Distribution of intracellular and surface components labeled with mannose-3H in amoebae exposed to the local anesthetic lignocaine.

Following injection with mannose-3H, which is a precursor to cell surface components, amoebae were exposed to the local anesthetic, lignocaine. Electron microscope radioautographs were prepared at intervals between 1 and 24 h after injection, and the distribution of silver grains over various parts of control and treated cells was determined. Control amoebae displayed successive peaks of radioactivity associated with the Golgi apparatus, cell surface, and "fringed" vacuoles. In the presence of lignocaine, incorporation of precursor into the Golgi apparatus and endoplasmic reticulum at the early intervals was inhibited, a result suggesting that glycosylation of surface components diminished. At later times, the proportion of grains associated with the cell surface and fringed vacuoles of treated cells decreased while that over lysosomes increased compared to controls. The changes in patterns of labelling of the Golgi apparatus and cell surface in lignocaine-treated amoebae resembled alterations previously observed in amoebae exposed to a general anesthetic. However, the effects of local and general anesthetic agents on the endoplasmic reticulum, lipid droplets, and lysosomes differed.

Amoeba↗
PubMed1995

The nuclear membrane-associated honeycomb structure of the unicellular organism Amoeba proteus: on the search for homologies with the nuclear lamina of metazoa.

In the protozoon Amoeba proteus, a complex and highly organized structure with the morphology of a honeycomb is associated with the nucleoplasmic surface of the nuclear membrane. We have tested whether this structure exhibits similarity to the nuclear lamina of metazoic organisms. First, we have shown that the honeycomb layer is composed of 3 to 5 nm thick protein fibrils resistant to treatment with detergent, high salt, and digestion with nucleases, thus possessing properties typical for karyoskeletal elements. However, in contrast to the meshwork of lamin filaments in somatic cells of metazoic organisms, the honeycomb layer is not tightly anchored to the nucleoplasmic side of pore complexes, or to the inner nuclear membrane. Second, in microinjection experiments we investigated whether fluorescently labeled lamins of Xenopus laevis (lamins A and LI) and Drosophila melanogaster (lamin Dmo) were able to associate in vivo with the Amoeba proteus honeycomb structure. In microinjected amoeba these three lamins were efficiently transported into the nucleus, but did not associate with the nuclear envelope. Our results suggest that the Amoeba proteus nuclear envelope, including the honeycomb layer, does not contain proteins exhibiting high homologies to lamins of metazoan species thus preventing the localized assembly of microinjected lamins along the nuclear periphery.

3T3 Cells↗
PubMed1984

Effects of folic acid upon filopodia of Dictyostelium discoideum vegetative amoebae.

Living vegetative D, discoideum amoebae were studied to determine whether their filopodia respond to folic acid, a chemoattractant for these cells. Exponentially growing amoebae (ca. 10 micron diameter) exhibit 5-30 micron long filopodia; at stationary phase, aggregation competent amoebae have numerous multibranched filopodia up to 100 micron long. Folic acid was observed to stimulate production, elongation, and branching of filopodia with its effects progressively changing as the amoebae approach aggregation. Filopodial construction was also found to be dependent upon Mg2+ levels. The significance of these results is discussed with respect to progressive changes within the vegetative phase as well as to the mechanisms of amoeboid movement, pseudopodial activity, and chemotaxis.

Chemotaxis↗
PubMed2000

The regulative capacity of prespore amoebae as demonstrated by fluorescence-activated cell sorting and green fluorescent protein.

The ability of prespore Dictyostelium discoideum amoebae to undergo redifferentiation so as to reestablish normal spore/stalk proportioning has been demonstrated in various ways over the years, beginning with the classic microdissection work of K. Raper. The discovery of anterior-like cells in the slug posterior, however, cast doubt on that ability, and more recent experiments using a cell-specific toxin suggested that prespore redifferentiation may not in fact occur. To reexamine this question, we performed fluorescence-activated cell sorting (FACS) upon amoebae expressing a mutated green fluorescent protein gene (S65T-GFP) under the control of a prespore-specific (PsA) promoter. FACS produced prespore cell populations with purities, measured by GFP expression, as high as 99. 5%. Sorted GFP(+) cells were developmentally competent and produced normally proportioned fruits, indistinguishable from those of "sham-sorted" (permissively gated, mixed GFP(+) and GFP(-)) amoebae. This result confirms the developmental totipotency of prespore amoebae.

Animals↗
PubMed1998

The actomyosin cytoskeleton of amoebae of the cellular slime molds acrasis rosea and protostelium mycophaga: structure, biochemical properties, and function

In amoebae of the cellular slime molds (mycetozoans) Acrasis rosea and Protostelium mycophaga, bundles of F-actin radiate from the endoplasm-ectoplasm interface into the pseudopodia, where G-actin is also located. We conclude that these actin bundles form a core scaffold driving pseudopod extension which is subsequently completed by filling with a more loosely organized meshwork of F-actin. Some bipolar, elongate amoebae of A. rosea also contained long bundles of F-actin that traverse the cells lengthwise and remotely resemble stress fibers. Rodlets of F-actin were scattered in the body of amoebae of A. rosea or formed star-shaped or polygonal complexes near or around contractile vacuoles, where they may play a role in contraction. In total protein extracts analyzed by SDS-PAGE and immunoblots the actins migrated like the rabbit skeletal muscle control. The relative proportion of actin in total protein extracts was 7.9% for A. rosea and 34.5% for P. mycophaga. We detected four or five isoactins in extracts of both species and we determined that the genome of each species contains approximately six actin genes. Whether they are all expressed or if posttranslational modifications occur remains to be determined. Myosin II was enriched in actomyosin extracts; its Mr was 187.8 kDa for A. rosea and 220.7 kDa for P. mycophaga. Cell models ("ghosts") contracted upon the addition of ATP. We conclude that amoebae of A. rosea and P. mycophaga, although behaving differently from those of Dictyostelium discoideum, contain the basic repertoire of molecules that enable pseudopod extension by actin polymerization and ATP-induced contraction of the cell cortex. Copyright 1998 Academic Press.

Journal Article↗
PubMed2002

Distribution of free-living amoebae in James River, Virginia, USA.

A comprehensive survey to document the presence of free-living amoebae was conducted along 58 km of James River, near Richmond, Virginia, USA. Sites included tidal and non-tidal freshwater areas, near 40 combined sewer outflows, three municipal wastewater treatment plant release sites, and thermal discharge from a coal-fired power plant. Amoebae were present on all collection dates, spring through autumn, and at all sites ( n=330). Five genera, Naegleria, Vannella, Acanthamoeba, Vahlkampfia, and Hartmannella were present in both the water column and sediment. The most common isolates from the water column were Naegleria and Vannella. Water conditions conducive to the presence of large quantities of fecal coliform bacteria were correlated with the prevalence of free-living amoebae. Some of the amoebae in this complex ecosystem can act as opportunistic pathogens, may play a role in diseases of aquatic organisms in this heavily urbanized river, and may present a risk to human health.

Animals↗
PubMed2001

Naegleria fowleri amoebae express a membrane-associated calcium-independent phospholipase A(2).

Naegleria fowleri, a free-living amoeba, is the causative agent of primary amoebic meningoencephalitis. Previous reports have demonstrated that N. fowleri expresses one or more forms of phospholipase A(2) (PLA(2)) and that a secreted form of this enzyme is involved in pathogenesis. However, the molecular nature of these phospholipases remains largely unknown. This study was initiated to determine whether N. fowleri expresses analogs of the well-characterized PLA(2)s that are expressed by mammalian macrophages. Amoeba cell homogenates contain a PLA(2) activity that hydrolyzes the substrate that is preferred by the 85 kDa calcium-dependent cytosolic PLA(2), cPLA(2). However, unlike the cPLA(2) enzyme in macrophages, this activity is largely calcium-independent, is constitutively associated with membranes and shows only a modest preference for phospholipids that contain arachidonate. The amoeba PLA(2) activity is sensitive to inhibitors that block the activities of cPLA(2)-alpha and the 80 kDa calcium-independent PLA(2), iPLA(2), that are expressed by mammalian cells. One of these compounds, methylarachidonyl fluorophosphonate, partially inhibits the constitutive release of [(3)H]arachidonic acid from pre-labeled amoebae. Together, these data suggest that N. fowleri expresses a constitutively active calcium-independent PLA(2) that may play a role in the basal phospholipid metabolism of these cells.

Animals↗
PubMed1999

Physarum amoebae express a distinct fragmin-like actin-binding protein that controls in vitro phosphorylation of actin by the actin-fragmin kinase.

Amoebae and plasmodia constitute the two vegetative growth phases of the Myxomycete Physarum. In vitro and in vivo phosphorylation of actin in plasmodia is tightly controlled by fragmin P, a plasmodium-specific actin-binding protein that enables actin phosphorylation by the actin-fragmin kinase. We investigated whether amoebal actin is phosphorylated by this kinase, in spite of the lack of fragmin P. Strong actin phosphorylation was detected only following addition of recombinant actin-fragmin kinase to cell-free extracts of amoebae, suggesting that amoebae contain a protein with properties similar to plasmodial fragmin. We purified the complex between actin and this protein to homogeneity. Using an antibody that specifically recognizes phosphorylated actin, we demonstrate that Thr203 in actin can be phosphorylated in this complex. A full-length amoebal fragmin cDNA was cloned and the deduced amino acid sequence shows 65% identity with plasmodial fragmin. However, the fragmins are encoded by different genes. Northern blots using RNA from a developing Physarum strain demonstrate that this fragmin isoform (fragmin A) is not expressed in plasmodia. In situ localization showed that fragmin A is present mainly underneath the plasma membrane. Our results indicate that Physarum amoebae express a fragmin P-like isoform which shares the property of binding actin and converting the latter into a substrate for the actin-fragmin kinase.

Actins↗
PubMed1993

Proton pumps populate the contractile vacuoles of Dictyostelium amoebae.

Amoebae of the eukaryotic microorganism Dictyostelium discoideum were found to contain an interconnected array of tubules and cisternae whose membranes were studded with 15-nm-diameter "pegs." Comparison of the ultrastructure and freeze-fracture behavior of these pegs with similar structures found in other cells and tissues indicated that they were the head domains of vacuolar-type proton pumps. Supporting this identification, the pegs were observed to decorate and clump when broken amoebae were exposed to an antiserum against the B subunit of mammalian vacuolar H(+)-ATPase. The appearance of the peg-rich cisternae in quick-frozen amoebae depended on their osmotic environment: under hyperosmotic conditions, the cisternae were flat with many narrow tubular extensions, while under hypo-osmotic conditions the cisternae ranged from bulbous to spherical. In all cases, however, their contents deep etched like pure water. These properties indicated that the interconnected tubules and cisternae comprise the contractile vacuole system of Dictyostelium. Earlier studies had demonstrated that contractile vacuole membranes in Dictyostelium are extremely rich in calmodulin (Zhu, Q., and M. Clarke, 1992, J. Cell Biol. 118: 347-358). Light microscopic immunofluorescence confirmed that antibodies against the vacuolar proton pump colocalized with anti-calmodulin antibodies on these organelles. Time-lapse video recording of living amoebae imaged by interference-reflection microscopy, or by fluorescence microscopy after staining contractile vacuole membranes with potential-sensitive styryl dyes, revealed the extent and dynamic interrelationship of the cisternal and tubular elements in Dictyostelium's contractile vacuole system. The high density of proton pumps throughout its membranes suggests that the generation of a proton gradient is likely to be an important factor in the mechanism of fluid accumulation by contractile vacuoles.

Animals↗
PubMed1992

Association of Vibrio cholerae with fresh water amoebae.

An investigation was undertaken to determine whether Acanthamoeba polyphaga SHI and Naegleria gruberi 1518/1e could affect the survival of various strains of Vibrio cholerae in laboratory microcosms. In microcosms pre-inoculated with trophozoites of amoebae, all six strains of V. cholerae tested survived and multiplied during 24 h. In control microcosms without trophozoites of amoebae, survival of the V. cholerae strains was much decreased. Two strains of V. cholerae were used to determine whether V. cholerae might survive ingestion within amoebae and subsequent encystment. Strain 152 was re-isolated from encysting N. gruberi 1518/1e but not from A. polyphaga SHI. Strain 9112 could not be isolated from cysts of either species of amoebae.

Acanthamoeba↗
PubMed1991

Free-living amoebae: pathogenicity and immunity.

Free-living amoebae causes three well-defined disease entities: (i) primary amoebic meningoencephalitis, caused by Naegleria fowleri, (ii) granulomatous amoebic encephalitis and (iii) chronic amoebic keratitis, caused by species of Acanthamoeba. Both Naegleria infections and chronic amoebic keratitis occur in healthy individuals while granulomatous amoebic encephalitis is often associated with patients with acquired immunodeficiencies. The different pathogenic behaviour of these organisms is associated with differences in life cycle, amoeboidal locomotion, enzyme composition (such as phospholipase A), and cytotoxins, as well as natural host immunity. Immunity against these amoebae (whether acquired or natural) involves a combination of complement, antibody and cell-mediated immunity. Evidence suggests that the major mechanisms of immunity against these amoebae is activation of phagocytic cells, especially neutrophils, by lymphokines and opsonization of the amoebae by antibody which promote an antibody dependent cellular destruction of the organism.

Acanthamoeba↗