PubMed · 8330424
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P Nuutila, J Eskola. 1993. Incorrect FT4 assay buffer stated.. https://pubmed.ncbi.nlm.nih.gov/8330424/
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Electrophoresis through agarose and polyacrylamide-type gels is the standard method to separate, identify, and purify nucleic acids. Properties of electrophoresis buffers such as pH, ionic strength, and composition affect performance. The buffers in use contain a weak acid or weak base buffered by a compound with a dissimilar pK. Herein, three pK-matched buffers were developed, each containing two effective buffering components: one weak base and one weak acid which have similar pKa at 25 degrees C (within 0.3 pK units): (i) Ethanolamine/Capso, pH 9.6; (ii) triethanolamine/Tricine, pH 7.9; and (iii) Bis-Tris/Aces, pH 6.7. On agarose gels, the buffers in various concentrations were tested for separation of double-stranded DNA fragments with various DNA markers, agarose gel concentrations, and field strengths. Mobility was inversely proportional to the logarithm of molecular weight. The buffers provided high resolution without smearing at more dilute concentration than is possible with standard TAE (Tris/acetate, pH 8.0) or TBE (Tris/borate, pH 8.3) buffers. The buffers were also tested in 7 M urea denaturing LongRanger sequencing gels and in nondenaturing polyacrylamide SSCP gels. The pK-matched buffers provide good separation and high resolution, at a broad range of potential pH values. In comparison to TAE and TBE, pK-matched buffers provide higher voltage and current stability, lower working concentration, more concentrated stock solutions (up to 200x), and lower current per unit voltage, resulting in less heat generation.
Hydroquinone was found to suppress bubble formation at the outlet electrode of a sheathless capillary electrophoresis/electrospray ionization-mass spectrometer by replacing the oxidation of water (2H2O(1)<-->O2(g) + 4H+ + 4e) with that of more easily oxidized hydroquinone (hydroquinone<-->p-benzoquinone + 2H+ + 2e). Formation of p-benzoquinone replaces the formation of oxygen gas, effectively suppressing gas bubble formation. Several electrode materials, including platinum, gold-coated stainless steel, and stainless steel wires, were tested. However, hydroquinone suppressed bubbles only at the platinum electrode. Combination of the in-capillary electrode sheathless interface using platinum wire, hydroquinone as a buffer additive, and pressure programming at the inlet of the capillary electrophoresis provided a rugged high efficiency interface for analysis of protein digests using CE/ESI-MS.
An easy, rapid and sensitive method of analysis for capsaicin and dihydrocapsaicin and its application for determination of these two amides in fruit extracts of different varieties of Capsicum frutescens by micellar electrokinetic capillary chromatography has been developed. Optimum separation was achieved with a fused-silica capillary column (600 mm x 0.075 mm I.D) and a running buffer at pH 9.0 prepared from 15 mM sodium tetraborate and 15 mM sodium dihydrogenphosphate, and 67.5 mM sodium dodecyl sulphate. Addition of 15% (v/v) methanol in the running buffer was found to be essential for the separation. The applied voltage was +22.5 kV. The compounds were detected by UV at 214 nm. Both capsaicin and dihydrocapsaicin were detected within 11 min, with an excellent resolution.