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Catalyzing computational biology research at an academic institute through an interest network.

Jaroslav Zak·Ian Newman·Daniel J Montiel Garcia·Daniele Parisi·Janet Joy·Steven R Head·Jean-Christophe Ducom·Padmaja Natarajan·Haissi Cui·Sabah Ul-Hasan
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Abstract

Biology has been transformed by the rapid development of computing and the concurrent rise of data-rich approaches such as, omics or high-resolution imaging. However, there is a persistent computational skills gap in the biomedical research workforce. Inherent limitations of classroom teaching and institutional core support highlight the need for accessible ways for researchers to explore developments in computational biology. An analysis of the Scripps Research Genomics Core revealed increases in the total number and diversity of experiments: the share of experiments other than bulk RNA- or DNA-sequencing increased from 34% to 60% within 10 years, requiring more tailored computational analyses. These challenges were tackled by forming a volunteer-led affinity group of approximately 300 academic biomedical researchers interested in computational biology, referred to as the Computational Biology and Bioinformatics (CBB) affinity group. This adaptive group has provided continuing education and networking opportunities through seminars, workshops, and coding sessions while evolving along with the needs of its members. A survey of CBB's impact confirmed the group's events increased the members' exposure to computational biology educational and research events (79% respondents) and networking opportunities (61% respondents). Thus, volunteer-led affinity groups may be a viable complement to traditional institutional resources for enhancing the application of computing in biomedical research.

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Computational BiologyHumansAcademies and InstitutesBiomedical ResearchResearch PersonnelGenomicsJournal ArticleResearch Support, Non-U.S. Gov't

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Jaroslav Zak, Ian Newman, Daniel J Montiel Garcia, Daniele Parisi, Janet Joy, Steven R Head, Jean-Christophe Ducom, Padmaja Natarajan, Haissi Cui, Sabah Ul-Hasan. 2025-09-10. Catalyzing computational biology research at an academic institute through an interest network.. https://doi.org/10.1371/journal.pcbi.1013453

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