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Abstract thinking.

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Laurel Halloran. 2005. Abstract thinking.. https://pubmed.ncbi.nlm.nih.gov/16231555/

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Frequency and determinants of nonpublication of research in the stroke literature.

BACKGROUND AND PURPOSE: Selective nonpublication will yield publication bias and a published literature imperfectly representative of the full range of scientific findings. We evaluated the proportion of research abstracts presented at the leading United States research meeting in stroke, the International Stroke Conference (ISC), which were subsequently published as full-length articles and investigated the factors associated with full manuscript publication. METHODS: Features of all abstracts presented at the annual ISC meeting in February 2000 were analyzed. Search of the National Library of Medicine PubMed database and written communication with abstract authors was performed to determine conversion of abstracts to fully published manuscripts over the subsequent 5 years. RESULTS: Among the 353 abstracts presented at the 2000 International Stroke Conference, 108 were oral presentations and 245 posters. Overall, 202/353 (62.3%) resulted in full-length publications, with a median time to publication of 15 months. In multivariate analysis, factors increasing likelihood of full-length publication were: platform rather than poster presentations (odds ratio [OR] 3.0, 95% CI, 1.6 to 5.5), authors with a university affiliation (OR 2.2, 95% CI, 1.2 to 4.1), and European region of origin (OR 2.2, 95% CI, 1.1 to 4.4), whereas topic concerning community/risk factors decreased the likelihood of publication (OR 0.3, 95% CI, 0.16 to 0.74). Positive results, multicenter collaboration and industry sponsorship did not affect publication rate. CONCLUSIONS: Approximately 1 of every 3 abstracts presented at an international stroke meeting was not published as a full manuscript within 5 years. Poster abstracts were less likely to be published in full manuscript form than oral presentations.

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Text similarity: an alternative way to search MEDLINE.

MOTIVATION: The most widely used literature search techniques, such as those offered by NCBI's PubMed system, require significant effort on the part of the searcher, and inexperienced searchers do not use these systems as effectively as experienced users. Improved literature search engines can save researchers time and effort by making it easier to locate the most important and relevant literature. RESULTS: We have created and optimized a new, hybrid search system for Medline that takes natural text as input and then delivers results with high precision and recall. The combination of a fast, low-sensitivity weighted keyword-based first pass algorithm to cast a wide net to gather an initial set of literature, followed by a unique sentence-alignment based similarity algorithm to rank order those results was developed that is sensitive, fast and easy to use. Several text similarity search algorithms, both standard and novel, were implemented and tested in order to determine which obtained the best results in information retrieval exercises. AVAILABILITY: Literature searching algorithms are implemented in a system called eTBLAST, freely accessible over the web at http://invention.swmed.edu. A variety of other derivative systems and visualization tools provides the user with an enhanced experience and additional capabilities. CONTACT: Harold.Garner@UTSouthwestern.edu.

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