The PredictProtein server.

Burkhard Rost; Jinfeng Liu

doi:10.1093/nar/gkg508

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The PredictProtein server.

Burkhard Rost·Jinfeng Liu

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Abstract

PredictProtein (PP, http://cubic.bioc.columbia.edu/pp/) is an internet service for sequence analysis and the prediction of aspects of protein structure and function. Users submit protein sequence or alignments; the server returns a multiple sequence alignment, PROSITE sequence motifs, low-complexity regions (SEG), ProDom domain assignments, nuclear localisation signals, regions lacking regular structure and predictions of secondary structure, solvent accessibility, globular regions, transmembrane helices, coiled-coil regions, structural switch regions and disulfide-bonds. Upon request, fold recognition by prediction-based threading is available. For all services, users can submit their query either by electronic mail or interactively from World Wide Web.

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Databases, Protein Internet Protein Structure, Secondary Protein Structure, Tertiary Proteins Sequence Alignment Sequence Analysis, Protein Time Factors User-Computer Interface Journal Article Research Support, U.S. Gov't, P.H.S.

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Burkhard Rost, Jinfeng Liu. 2003-07-01. The PredictProtein server.. https://doi.org/10.1093/nar%2Fgkg508

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