ENDscript: a workflow to display sequence and structure information.

Patrice Gouet; Emmanuel Courcelle

doi:10.1093/bioinformatics/18.5.767

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ENDscript: a workflow to display sequence and structure information.

Patrice Gouet·Emmanuel Courcelle

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Abstract

UNLABELLED: ENDscript is a web server grouping popular programs such as BLAST, Multalin and DSSP. It uses as query the co-ordinates file of a protein in Protein Data Bank format and generates PostScript and png figures showing: residues conserved after a multiple alignment against homologous sequences, secondary structure elements, accessibility, hydropathy and intermolecular contacts. Thus, the user can relate quickly 1D, 2D and 3D information of a protein of known structure. AVAILABILITY: http://genopole.toulouse.inra.fr/ENDscript

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Amino Acid Sequence Data Display Database Management Systems Databases, Factual Databases, Protein Information Storage and Retrieval Internet Molecular Sequence Data Proteins Sequence Alignment Sequence Analysis, Protein Journal Article

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Patrice Gouet, Emmanuel Courcelle. 2002. ENDscript: a workflow to display sequence and structure information.. https://doi.org/10.1093/bioinformatics%2F18.5.767

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