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Biomedical subjects

Zahid Yaqoob

Publications and source records attributed to Zahid Yaqoob.

10 recordsLinked to original sources
PubMed2006

Slanted hole array beam profiler (SHArP)-a high-resolution portable beam profiler based on a linear aperture array.

We demonstrate a novel high-resolution portable beam profiler based on a slanted linear array of small apertures, termed a slanted hole array beam profiler (SHArP). The apertures are directly fabricated on a metal-coated CMOS imaging sensor. With a single linear scan, the aperture array can establish a virtual grid of sampling points for beam profiling. With our prototype, we demonstrate beam profiling of Gaussian beams over an area of 66.5 microm x 66.5 microm with a resolution of 0.8 microm (compare with the CMOS pixel size of 10 microm). The resolution can be improved into the range of submicrometers by fabricating smaller apertures. The good correspondence between the measured and calculated beam profiles proves the fidelity of our new beam profiling scheme.

Journal Article↗
PubMed2006

Homodyne en face optical coherence tomography.

We demonstrate, for what we believe to be the first time, the use of a 3 x 3 fiber-optic coupler to realize a homodyne optical coherence tomography (OCT) system for en face imaging of highly scattering tissues and turbid media. The homodyne OCT setup exploits the inherent phase shifts between different output ports of a 3 x 3 fiber-optic coupler to extract amplitude information of a sample. Our homodyne en face OCT system features a measured resolution of 14 microm axially and 9.4 microm laterally with a 90 dB signal-to-noise ratio at 10 micros integration time. En face OCT imaging of a stage 52 Xenopus laevis was successfully demonstrated at a depth of 600 microm within the sample.

Anatomy, Cross-Sectional↗
PubMed2006

Paired-angle-rotation scanning optical coherence tomography forward-imaging probe.

We report a novel forward-imaging optical coherence tomography (OCT), needle-probe paired-angle-rotation scanning OCT (PARS-OCT) probe. The probe uses two rotating angled gradient-index lenses to scan the output OCT probe beam over a wide angular arc (approximately 19 degrees half-angle) of the region forward of the probe. Among other advantages, this probe design is readily amenable to miniaturization and is capable of a variety of scan modes, including volumetric scans. To demonstrate the advantages of the probe design, we have constructed a prototype probe with an outer diameter of 1.65 mm and employed it to acquire four OCT images, with a 45 degrees angle between adjacent images, of the gill structure of a Xenopus laevis tadpole. The system sensitivity was measured to be 93 dB by using the prototype probe with an illumination power of 450 microW on the sample. Moreover, the axial and the lateral resolutions of the probe are 9.3 and 10.3-12.5 microm, respectively.

Computer-Aided Design↗
PubMed2005

Bulk acousto-optic wavelength agile filter module for a wavelength-multiplexed optical scanner.

An acousto-optic tunable filter-based wavelength-selection module with features optimized for a wavelength-multiplexed optical scanner (W-MOS) is proposed and demonstrated. The W-MOS produces high-speed multiple scan beams if it is engaged with an agile tunable source with multiwavelength generation capability. In particular, the proposed fiber-connected module features high-speed, low-loss, narrow-linewidth, and single-multiple wavelength selection by means of radio frequency drive signal control for single- or multiple-beam scan operations. The unique module offers input laser beam power control that in turn delivers the desired scanned laser beam power shaping. Experimental results match module design theory and demonstrate a fast 5.4-micros wavelength selection speed, a low (1.53-dB) fiber-to-fiber optical insertion loss, a 5.55-nm 3-dB spectral width, and a 1500-1600-nm agile wavelength operational band.

Journal Article↗
PubMed2004

Space-multiplexed optical scanner.

A low-loss two-dimensional optical beam scanner that is capable of delivering large (e.g., > 10 degrees) angular scans along the elevation as well as the azimuthal direction is presented. The proposed scanner is based on a space-switched parallel-serial architecture that employs a coarse-scanner module and a fine-scanner module that produce an ultrahigh scan space-fill factor, e.g., 900 x 900 distinguishable beams in a 10 degrees (elevation) x 10 degrees (azimuth) scan space. The experimentally demonstrated one-dimensional version of the proposed scanner has a supercontinuous scan, 100 distinguishable beam spots in a 2.29 degrees total scan range, and 1.5-dB optical insertion loss.

Journal Article↗
PubMed2003

High-speed two-dimensional laser scanner based on Bragg gratings stored in photothermorefractive glass.

A high-speed free-space wavelength-multiplexed optical scanner with high-speed wavelength selection coupled with narrowband volume Bragg gratings stored in photothermorefractive (PTR) glass is reported. The proposed scanner with no moving parts has a modular design with a wide angular scan range, accurate beam pointing, low scanner insertion loss, and two-dimensional beam scan capabilities. We present a complete analysis and design procedure for storing multiple tilted Bragg-grating structures in a single PTR glass volume (for normal incidence) in an optimal fashion. Because the scanner design is modular, many PTR glass volumes (each having multiple tilted Bragg-grating structures) can be stacked together, providing an efficient throughput with operations in both the visible and the infrared (IR) regions. A proof-of-concept experimental study is conducted with four Bragg gratings in independent PTR glass plates, and both visible and IR region scanner operations are demonstrated.

Journal Article↗
PubMed2003

Submicrosecond speed optical coherence tomography system design and analysis by use of acousto-optics.

A novel high-speed no-moving-parts optical coherence tomography (OCT) system is introduced that acquires sample data at less than a microsecond per data point sampling rate. The basic principle of the proposed OCT system relies on use of an acousto-optic deflector. This OCT system has the attractive features of an acousto-optic scanning heterodyne interferometer coupled with an acousto-optic (AO) variable optical delay line operating in a reflective mode. Fundamentally, OCT systems use a broadband light source for high axial resolution inside the sample or living tissue under examination. Inherently, AO devices are Bragg-mode wavelength-sensitive elements. We identify that two beams generated by a Bragg cell naturally have unbalanced and inverse spectrums with respect to each other. This mismatch in spectrums in turn violates the ideal autocorrelation condition for a high signal-to-noise ratio broadband interferometric sensor such as OCT. We solve this fundamental limitation of Bragg cell use for OCT by deploying a new interferometric architecture where the two interfering beams have the same power spectral profile over the bandwidth of the broadband source. With the proposed AO based system, high (e.g., megahertz) intermediate frequency can be generated for low 1/f noise heterodyne detection. System issues such as resolution, number of axial scans, and delay-path selection time are addressed. Experiments described demonstrate our high-speed acousto-optically tuned OCT system where optical delay lines can be selected at submicrosecond speeds.

Acoustics↗
PubMed2002

Free-space wavelength-multiplexed optical scanner demonstration.

Experimental demonstration of a no-moving-parts free-space wavelength-multiplexed optical scanner (W-MOS) is presented. With fast tunable lasers or optical filters and planar wavelength dispersive elements such as diffraction gratings, this microsecond-speed scanner enables large several-centimeter apertures for subdegree angular scans. The proposed W-MOS design incorporates a unique optical amplifier and variable optical attenuator combination that enables the calibration and modulation of the scanner response, leading to any desired scanned laser beam power shaping. The experimental setup uses a tunable laser centered at 1560 nm and a 600-grooves/mm blazed reflection grating to accomplish an angular scan of 12.92 degrees as the source is tuned over an 80-nm bandwidth. The values for calculated maximum optical beam divergance, required wavelength resolution, beam-pointing accuracy, and measured scanner insertion loss are 1.076 mrad, 0.172 nm, 0.06 mrad, and 4.88 dB, respectively.

Journal Article↗
PubMedDate not supplied

Molecular contrast optical coherence tomography: A pump-probe scheme using indocyanine green as a contrast agent.

The use of indocyanine green (ICG), a U.S. Food and Drug Administration approved dye, in a pump-probe scheme for molecular contrast optical coherence tomography (MCOCT) is proposed and demonstrated for the first time. In the proposed pump-probe scheme, an optical coherence tomography (OCT) scan of the sample containing ICG is first acquired. High fluence illumination (approximately 190 kJ/cm2) is then used to permanently photobleach the ICG molecules--resulting in a permanent alteration of the overall absorption of the ICG. A second OCT scan is next acquired. The difference of the two OCT scans is used to determine the depth resolved distribution of ICG within a sample. To characterize the extent of photobleaching in different ICG solutions, we determine the cumulative probability of photobleaching, phi(B,cum), defined as the ratio of the total photobleached ICG molecules to the total photons absorbed by the ground state molecules. An empirical study of ICG photobleaching dynamics shows that phi(B,cum) decreases with fluence as well as with increasing dye concentration. The quantity phi(B,cum) is useful for estimating the extent of photobleaching in an ICG sample (MCOCT contrast) for a given fluence of the pump illumination. The paper also demonstrates ICG-based MCOCT imaging in tissue phantoms as well as within stage 54 Xenopus laevis.

Animals↗